RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
LINC00839-201ENST00000424751 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
LINC00839-201ENST00000424751 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
LINC00839-201ENST00000424751 CTTNBP2Q8WZ74 1663 aa22.24■■□□□ 1.15
LINC00839-201ENST00000424751 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
LINC00839-201ENST00000424751 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
LINC00839-201ENST00000424751 FBLN2P98095 1184 aa22.18■■□□□ 1.14
LINC00839-201ENST00000424751 FHOD3Q2V2M9 1422 aa22.15■■□□□ 1.14
LINC00839-201ENST00000424751 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
LINC00839-201ENST00000424751 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
LINC00839-201ENST00000424751 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
LINC00839-201ENST00000424751 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
LINC00839-201ENST00000424751 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
LINC00839-201ENST00000424751 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
LINC00839-201ENST00000424751 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
LINC00839-201ENST00000424751 IQGAP2Q13576 1575 aa22.01■■□□□ 1.11
LINC00839-201ENST00000424751 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
LINC00839-201ENST00000424751 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
LINC00839-201ENST00000424751 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
LINC00839-201ENST00000424751 CHD1O14646 1710 aa21.98■■□□□ 1.11
LINC00839-201ENST00000424751 EFCAB5A4FU69 1503 aa21.93■■□□□ 1.1
LINC00839-201ENST00000424751 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
LINC00839-201ENST00000424751 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
LINC00839-201ENST00000424751 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
LINC00839-201ENST00000424751 APLP2Q06481 763 aa21.9■■□□□ 1.1
LINC00839-201ENST00000424751 ARID3CA6NKF2 412 aa21.89■■□□□ 1.09
LINC00839-201ENST00000424751 NUP160Q12769 1436 aa21.89■■□□□ 1.09
LINC00839-201ENST00000424751 DISP1Q96F81 1524 aa21.89■■□□□ 1.09
LINC00839-201ENST00000424751 UGGT2Q9NYU1 1516 aa21.86■■□□□ 1.09
LINC00839-201ENST00000424751 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
LINC00839-201ENST00000424751 KIAA0556O60303 1618 aa21.82■■□□□ 1.08
LINC00839-201ENST00000424751 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
LINC00839-201ENST00000424751 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
LINC00839-201ENST00000424751 FMN1Q68DA7 1419 aa21.76■■□□□ 1.07
LINC00839-201ENST00000424751 FYCO1Q9BQS8 1478 aa21.76■■□□□ 1.07
LINC00839-201ENST00000424751 CFAP43Q8NDM7 1665 aa21.75■■□□□ 1.07
LINC00839-201ENST00000424751 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
LINC00839-201ENST00000424751 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
LINC00839-201ENST00000424751 CDK13Q14004 1512 aaKnown RBP21.71■■□□□ 1.07
LINC00839-201ENST00000424751 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
LINC00839-201ENST00000424751 MAGI3Q5TCQ9 1506 aa21.69■■□□□ 1.06
LINC00839-201ENST00000424751 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
LINC00839-201ENST00000424751 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
LINC00839-201ENST00000424751 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
LINC00839-201ENST00000424751 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
LINC00839-201ENST00000424751 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
LINC00839-201ENST00000424751 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
LINC00839-201ENST00000424751 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
LINC00839-201ENST00000424751 RAPGEF6Q8TEU7 1601 aa21.6■■□□□ 1.05
LINC00839-201ENST00000424751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
LINC00839-201ENST00000424751 SHROOM2Q13796 1616 aa21.59■■□□□ 1.05
LINC00839-201ENST00000424751 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
LINC00839-201ENST00000424751 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
LINC00839-201ENST00000424751 SCAF1Q9H7N4 1312 aaKnown RBP21.57■■□□□ 1.04
LINC00839-201ENST00000424751 ITGAEP38570 1179 aa21.57■■□□□ 1.04
LINC00839-201ENST00000424751 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
LINC00839-201ENST00000424751 RRBP1Q9P2E9 1410 aaKnown RBP21.52■■□□□ 1.04
LINC00839-201ENST00000424751 ABCA8O94911 1581 aa21.49■■□□□ 1.03
LINC00839-201ENST00000424751 CCNB3Q8WWL7 1395 aa21.49■■□□□ 1.03
LINC00839-201ENST00000424751 PTPRGP23470 1445 aa21.49■■□□□ 1.03
LINC00839-201ENST00000424751 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
LINC00839-201ENST00000424751 CCDC18Q5T9S5 1454 aa21.47■■□□□ 1.03
LINC00839-201ENST00000424751 FAM50AQ14320 339 aaKnown RBP21.46■■□□□ 1.03
LINC00839-201ENST00000424751 EHBP1L1Q8N3D4 1523 aa21.44■■□□□ 1.02
LINC00839-201ENST00000424751 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
LINC00839-201ENST00000424751 ATP10BO94823 1461 aa21.42■■□□□ 1.02
LINC00839-201ENST00000424751 KIF14Q15058 1648 aa21.4■■□□□ 1.02
LINC00839-201ENST00000424751 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
LINC00839-201ENST00000424751 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
LINC00839-201ENST00000424751 FGD6Q6ZV73 1430 aa21.37■■□□□ 1.01
LINC00839-201ENST00000424751 UACAQ9BZF9 1416 aa21.34■■□□□ 1.01
LINC00839-201ENST00000424751 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
LINC00839-201ENST00000424751 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1.01
LINC00839-201ENST00000424751 ZNF644Q9H582 1327 aaPredicted RBP21.32■■□□□ 1
LINC00839-201ENST00000424751 PTPRKQ15262 1439 aa21.32■■□□□ 1
LINC00839-201ENST00000424751 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
LINC00839-201ENST00000424751 PTPN23Q9H3S7 1636 aa21.28■■□□□ 1
LINC00839-201ENST00000424751 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
LINC00839-201ENST00000424751 ABCC2Q92887 1545 aa21.27■■□□□ 1
LINC00839-201ENST00000424751 ADCY10Q96PN6 1610 aa21.23■□□□□ 0.99
LINC00839-201ENST00000424751 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
LINC00839-201ENST00000424751 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
LINC00839-201ENST00000424751 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
LINC00839-201ENST00000424751 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
LINC00839-201ENST00000424751 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
LINC00839-201ENST00000424751 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
LINC00839-201ENST00000424751 GPATCH8Q9UKJ3 1502 aaKnown RBP21.19■□□□□ 0.98
LINC00839-201ENST00000424751 CDC42BPAQ5VT25 1732 aa21.18■□□□□ 0.98
LINC00839-201ENST00000424751 ABCC10Q5T3U5 1492 aa21.18■□□□□ 0.98
LINC00839-201ENST00000424751 RAB3GAP2Q9H2M9 1393 aa21.17■□□□□ 0.98
LINC00839-201ENST00000424751 CENPBP07199 599 aaPredicted RBP21.17■□□□□ 0.98
LINC00839-201ENST00000424751 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
LINC00839-201ENST00000424751 TTC37Q6PGP7 1564 aa21.14■□□□□ 0.98
LINC00839-201ENST00000424751 NEUROD1Q13562 356 aa21.14■□□□□ 0.97
LINC00839-201ENST00000424751 DIEXFQ68CQ4 756 aaKnown RBP21.13■□□□□ 0.97
LINC00839-201ENST00000424751 RRP7BPQ9NSQ0 103 aa21.13■□□□□ 0.97
LINC00839-201ENST00000424751 KDM5BQ9UGL1 1544 aa21.12■□□□□ 0.97
LINC00839-201ENST00000424751 CFDP1Q9UEE9 299 aaPredicted RBP21.12■□□□□ 0.97
LINC00839-201ENST00000424751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC00839-201ENST00000424751 UHRF1BP1LA0JNW5 1464 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms