RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 RUSC2Q8N2Y8 1516 aa28.09■■■□□ 2.09
DDR1-234ENST00000424544 KIAA0586Q9BVV6 1533 aa28.07■■■□□ 2.08
DDR1-234ENST00000424544 CUL7Q14999 1698 aa28.03■■■□□ 2.08
DDR1-234ENST00000424544 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
DDR1-234ENST00000424544 NPM1P06748 294 aaKnown RBP eCLIP27.79■■■□□ 2.04
DDR1-234ENST00000424544 ADCY10Q96PN6 1610 aa27.78■■■□□ 2.04
DDR1-234ENST00000424544 PTPRGP23470 1445 aa27.76■■■□□ 2.04
DDR1-234ENST00000424544 KIF13AQ9H1H9 1805 aa27.76■■■□□ 2.03
DDR1-234ENST00000424544 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
DDR1-234ENST00000424544 MAPKBP1O60336 1514 aa27.75■■■□□ 2.03
DDR1-234ENST00000424544 ABCC10Q5T3U5 1492 aa27.74■■■□□ 2.03
DDR1-234ENST00000424544 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
DDR1-234ENST00000424544 CARMIL2Q6F5E8 1435 aa27.72■■■□□ 2.03
DDR1-234ENST00000424544 IQGAP2Q13576 1575 aa27.71■■■□□ 2.03
DDR1-234ENST00000424544 FAM69CQ0P6D2 419 aa27.7■■■□□ 2.02
DDR1-234ENST00000424544 DISP1Q96F81 1524 aa27.67■■■□□ 2.02
DDR1-234ENST00000424544 UGGT2Q9NYU1 1516 aa27.63■■■□□ 2.01
DDR1-234ENST00000424544 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
DDR1-234ENST00000424544 UHRF1BP1LA0JNW5 1464 aa27.58■■■□□ 2.01
DDR1-234ENST00000424544 PRXQ9BXM0 1461 aa27.57■■■□□ 2
DDR1-234ENST00000424544 ABCC2Q92887 1545 aa27.57■■■□□ 2
DDR1-234ENST00000424544 TTBK1Q5TCY1 1321 aaPredicted RBP27.57■■■□□ 2
DDR1-234ENST00000424544 UACAQ9BZF9 1416 aa27.56■■■□□ 2
DDR1-234ENST00000424544 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
DDR1-234ENST00000424544 KDM5BQ9UGL1 1544 aa27.46■■□□□ 1.99
DDR1-234ENST00000424544 ASXL2Q76L83 1435 aa27.46■■□□□ 1.99
DDR1-234ENST00000424544 PLB1Q6P1J6 1458 aa27.45■■□□□ 1.99
DDR1-234ENST00000424544 CSRNP3Q8WYN3 585 aa27.4■■□□□ 1.98
DDR1-234ENST00000424544 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
DDR1-234ENST00000424544 GLI2P10070 1586 aa27.39■■□□□ 1.98
DDR1-234ENST00000424544 GOLGA3Q08378 1498 aa27.37■■□□□ 1.97
DDR1-234ENST00000424544 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
DDR1-234ENST00000424544 TSPOAP1O95153 1857 aa27.32■■□□□ 1.96
DDR1-234ENST00000424544 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
DDR1-234ENST00000424544 ZCCHC11Q5TAX3 1644 aaKnown RBP27.29■■□□□ 1.96
DDR1-234ENST00000424544 KDM6BO15054 1643 aa27.27■■□□□ 1.96
DDR1-234ENST00000424544 ABCA8O94911 1581 aa27.27■■□□□ 1.96
DDR1-234ENST00000424544 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
DDR1-234ENST00000424544 EEA1Q15075 1411 aa27.24■■□□□ 1.95
DDR1-234ENST00000424544 MAP3K4Q9Y6R4 1608 aa27.19■■□□□ 1.94
DDR1-234ENST00000424544 WDR7Q9Y4E6 1490 aa27.19■■□□□ 1.94
DDR1-234ENST00000424544 COL17A1Q9UMD9 1497 aaPredicted RBP27.18■■□□□ 1.94
DDR1-234ENST00000424544 P3H3Q8IVL6 736 aa27.16■■□□□ 1.94
DDR1-234ENST00000424544 SAMD9Q5K651 1589 aa27.12■■□□□ 1.93
DDR1-234ENST00000424544 KDM4FA0A1W2PPD8 638 aa27.11■■□□□ 1.93
DDR1-234ENST00000424544 ATP10BO94823 1461 aa27.1■■□□□ 1.93
DDR1-234ENST00000424544 TEX14Q8IWB6 1497 aa27.09■■□□□ 1.93
DDR1-234ENST00000424544 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
DDR1-234ENST00000424544 KCNH8Q96L42 1107 aa27.08■■□□□ 1.93
DDR1-234ENST00000424544 CD109Q6YHK3 1445 aa27.05■■□□□ 1.92
DDR1-234ENST00000424544 MAGI3Q5TCQ9 1506 aa27.05■■□□□ 1.92
DDR1-234ENST00000424544 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
DDR1-234ENST00000424544 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
DDR1-234ENST00000424544 KIF21BO75037 1637 aa26.98■■□□□ 1.91
DDR1-234ENST00000424544 ARID3CA6NKF2 412 aa26.97■■□□□ 1.91
DDR1-234ENST00000424544 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
DDR1-234ENST00000424544 FHOD3Q2V2M9 1422 aa26.92■■□□□ 1.9
DDR1-234ENST00000424544 NUP153P49790 1475 aaKnown RBP26.92■■□□□ 1.9
DDR1-234ENST00000424544 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
DDR1-234ENST00000424544 ABCA9Q8IUA7 1624 aa26.85■■□□□ 1.89
DDR1-234ENST00000424544 EFCAB5A4FU69 1503 aa26.85■■□□□ 1.89
DDR1-234ENST00000424544 ARAP3Q8WWN8 1544 aa26.85■■□□□ 1.89
DDR1-234ENST00000424544 PHLDB1Q86UU1 1377 aa26.83■■□□□ 1.88
DDR1-234ENST00000424544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.81■■□□□ 1.88
DDR1-234ENST00000424544 HNRNPUL2Q1KMD3 747 aaKnown RBP26.81■■□□□ 1.88
DDR1-234ENST00000424544 ADGRL1O94910 1474 aa26.8■■□□□ 1.88
DDR1-234ENST00000424544 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
DDR1-234ENST00000424544 PLEKHD1A6NEE1 506 aa26.77■■□□□ 1.88
DDR1-234ENST00000424544 NEO1Q92859 1461 aa26.73■■□□□ 1.87
DDR1-234ENST00000424544 ARHGAP35Q9NRY4 1499 aa26.7■■□□□ 1.87
DDR1-234ENST00000424544 EHMT2Q96KQ7 1210 aa26.7■■□□□ 1.86
DDR1-234ENST00000424544 RAPGEF3O95398 923 aa26.68■■□□□ 1.86
DDR1-234ENST00000424544 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
DDR1-234ENST00000424544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.62■■□□□ 1.85
DDR1-234ENST00000424544 CDK13Q14004 1512 aaKnown RBP26.6■■□□□ 1.85
DDR1-234ENST00000424544 AKNAQ7Z591 1439 aa26.57■■□□□ 1.84
DDR1-234ENST00000424544 FRMPD1Q5SYB0 1578 aa26.56■■□□□ 1.84
DDR1-234ENST00000424544 FANCAO15360 1455 aa26.54■■□□□ 1.84
DDR1-234ENST00000424544 TTC37Q6PGP7 1564 aa26.53■■□□□ 1.84
DDR1-234ENST00000424544 PLCH2O75038 1416 aa26.52■■□□□ 1.84
DDR1-234ENST00000424544 DENND4BO75064 1496 aaPredicted RBP26.51■■□□□ 1.83
DDR1-234ENST00000424544 ATP1B4Q9UN42 357 aaPredicted RBP26.5■■□□□ 1.83
DDR1-234ENST00000424544 CDK11AQ9UQ88 783 aaPredicted RBP26.5■■□□□ 1.83
DDR1-234ENST00000424544 HECW1Q76N89 1606 aa26.5■■□□□ 1.83
DDR1-234ENST00000424544 RICTORQ6R327 1708 aa26.45■■□□□ 1.83
DDR1-234ENST00000424544 CFAP74Q9C0B2 1584 aa26.43■■□□□ 1.82
DDR1-234ENST00000424544 TROQ12816 1431 aaPredicted RBP26.43■■□□□ 1.82
DDR1-234ENST00000424544 ADAMTSL3P82987 1691 aa26.42■■□□□ 1.82
DDR1-234ENST00000424544 CASKIN1Q8WXD9 1431 aa26.41■■□□□ 1.82
DDR1-234ENST00000424544 EFCAB2Q5VUJ9 269 aa26.41■■□□□ 1.82
DDR1-234ENST00000424544 LRRIQ1Q96JM4 1722 aa26.39■■□□□ 1.82
DDR1-234ENST00000424544 ZMYM4Q5VZL5 1548 aa26.39■■□□□ 1.81
DDR1-234ENST00000424544 SCAPERQ9BY12 1400 aa26.39■■□□□ 1.81
DDR1-234ENST00000424544 MAGI2Q86UL8 1455 aa26.37■■□□□ 1.81
DDR1-234ENST00000424544 ARHGEF40Q8TER5 1519 aa26.36■■□□□ 1.81
DDR1-234ENST00000424544 HECW2Q9P2P5 1572 aa26.36■■□□□ 1.81
DDR1-234ENST00000424544 PTPRMP28827 1452 aa26.36■■□□□ 1.81
DDR1-234ENST00000424544 KIF14Q15058 1648 aa26.36■■□□□ 1.81
DDR1-234ENST00000424544 BCORL1Q5H9F3 1711 aa26.34■■□□□ 1.81
DDR1-234ENST00000424544 POGZQ7Z3K3 1410 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms