RNA–Protein interactions for RNA: ENST00000424536.2

GRAMD1A-203, Transcript of GRAM domain containing 1A, humanhuman

TSL 2 BASIC

Gene GRAMD1A, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-203ENST00000424536 KIAA0586Q9BVV6 1533 aa23.25■■□□□ 1.31
GRAMD1A-203ENST00000424536 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
GRAMD1A-203ENST00000424536 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.3
GRAMD1A-203ENST00000424536 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
GRAMD1A-203ENST00000424536 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
GRAMD1A-203ENST00000424536 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
GRAMD1A-203ENST00000424536 IQGAP2Q13576 1575 aa23.08■■□□□ 1.29
GRAMD1A-203ENST00000424536 NPM1P06748 294 aaKnown RBP eCLIP23.04■■□□□ 1.28
GRAMD1A-203ENST00000424536 EEA1Q15075 1411 aa23■■□□□ 1.27
GRAMD1A-203ENST00000424536 TNIKQ9UKE5 1360 aa22.98■■□□□ 1.27
GRAMD1A-203ENST00000424536 CSRNP3Q8WYN3 585 aa22.97■■□□□ 1.27
GRAMD1A-203ENST00000424536 PTPRGP23470 1445 aa22.97■■□□□ 1.27
GRAMD1A-203ENST00000424536 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
GRAMD1A-203ENST00000424536 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
GRAMD1A-203ENST00000424536 UGGT2Q9NYU1 1516 aa22.93■■□□□ 1.26
GRAMD1A-203ENST00000424536 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
GRAMD1A-203ENST00000424536 GOLGA3Q08378 1498 aa22.88■■□□□ 1.25
GRAMD1A-203ENST00000424536 FAM9AQ8IZU1 332 aaPredicted RBP22.88■■□□□ 1.25
GRAMD1A-203ENST00000424536 DISP1Q96F81 1524 aa22.87■■□□□ 1.25
GRAMD1A-203ENST00000424536 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
GRAMD1A-203ENST00000424536 MAPKBP1O60336 1514 aa22.83■■□□□ 1.25
GRAMD1A-203ENST00000424536 KIAA0556O60303 1618 aa22.83■■□□□ 1.25
GRAMD1A-203ENST00000424536 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
GRAMD1A-203ENST00000424536 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
GRAMD1A-203ENST00000424536 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
GRAMD1A-203ENST00000424536 ABCC2Q92887 1545 aa22.77■■□□□ 1.24
GRAMD1A-203ENST00000424536 ABCC10Q5T3U5 1492 aa22.76■■□□□ 1.23
GRAMD1A-203ENST00000424536 FAM69CQ0P6D2 419 aa22.74■■□□□ 1.23
GRAMD1A-203ENST00000424536 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
GRAMD1A-203ENST00000424536 KIF21BO75037 1637 aa22.69■■□□□ 1.22
GRAMD1A-203ENST00000424536 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
GRAMD1A-203ENST00000424536 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
GRAMD1A-203ENST00000424536 KDM5BQ9UGL1 1544 aa22.66■■□□□ 1.22
GRAMD1A-203ENST00000424536 ASXL2Q76L83 1435 aa22.64■■□□□ 1.21
GRAMD1A-203ENST00000424536 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
GRAMD1A-203ENST00000424536 ZCCHC11Q5TAX3 1644 aaKnown RBP22.59■■□□□ 1.21
GRAMD1A-203ENST00000424536 ABCA8O94911 1581 aa22.59■■□□□ 1.21
GRAMD1A-203ENST00000424536 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
GRAMD1A-203ENST00000424536 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
GRAMD1A-203ENST00000424536 GLI2P10070 1586 aa22.55■■□□□ 1.2
GRAMD1A-203ENST00000424536 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
GRAMD1A-203ENST00000424536 EFCAB5A4FU69 1503 aa22.52■■□□□ 1.2
GRAMD1A-203ENST00000424536 WDR7Q9Y4E6 1490 aa22.51■■□□□ 1.19
GRAMD1A-203ENST00000424536 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
GRAMD1A-203ENST00000424536 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
GRAMD1A-203ENST00000424536 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
GRAMD1A-203ENST00000424536 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
GRAMD1A-203ENST00000424536 FHOD3Q2V2M9 1422 aa22.44■■□□□ 1.18
GRAMD1A-203ENST00000424536 TEX14Q8IWB6 1497 aa22.43■■□□□ 1.18
GRAMD1A-203ENST00000424536 KDM6BO15054 1643 aa22.42■■□□□ 1.18
GRAMD1A-203ENST00000424536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-203ENST00000424536 HNRNPUL2Q1KMD3 747 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-203ENST00000424536 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
GRAMD1A-203ENST00000424536 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
GRAMD1A-203ENST00000424536 ATP10BO94823 1461 aa22.41■■□□□ 1.18
GRAMD1A-203ENST00000424536 ARID3CA6NKF2 412 aa22.37■■□□□ 1.17
GRAMD1A-203ENST00000424536 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
GRAMD1A-203ENST00000424536 FMN1Q68DA7 1419 aa22.35■■□□□ 1.17
GRAMD1A-203ENST00000424536 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
GRAMD1A-203ENST00000424536 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
GRAMD1A-203ENST00000424536 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
GRAMD1A-203ENST00000424536 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
GRAMD1A-203ENST00000424536 MAGI3Q5TCQ9 1506 aa22.3■■□□□ 1.16
GRAMD1A-203ENST00000424536 ARHGAP35Q9NRY4 1499 aa22.29■■□□□ 1.16
GRAMD1A-203ENST00000424536 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
GRAMD1A-203ENST00000424536 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
GRAMD1A-203ENST00000424536 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
GRAMD1A-203ENST00000424536 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
GRAMD1A-203ENST00000424536 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
GRAMD1A-203ENST00000424536 PHLDB1Q86UU1 1377 aa22.23■■□□□ 1.15
GRAMD1A-203ENST00000424536 COL17A1Q9UMD9 1497 aaPredicted RBP22.14■■□□□ 1.13
GRAMD1A-203ENST00000424536 CLIP1P30622 1438 aa22.14■■□□□ 1.13
GRAMD1A-203ENST00000424536 CDK13Q14004 1512 aaKnown RBP22.13■■□□□ 1.13
GRAMD1A-203ENST00000424536 NEO1Q92859 1461 aa22.13■■□□□ 1.13
GRAMD1A-203ENST00000424536 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
GRAMD1A-203ENST00000424536 CASKIN1Q8WXD9 1431 aa22.09■■□□□ 1.13
GRAMD1A-203ENST00000424536 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
GRAMD1A-203ENST00000424536 CFAP74Q9C0B2 1584 aa22.07■■□□□ 1.12
GRAMD1A-203ENST00000424536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.121e-10■■■■□ 24.8
GRAMD1A-203ENST00000424536 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
GRAMD1A-203ENST00000424536 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
GRAMD1A-203ENST00000424536 PCF11O94913 1555 aaKnown RBP22.02■■□□□ 1.12
GRAMD1A-203ENST00000424536 FANCAO15360 1455 aa22.02■■□□□ 1.12
GRAMD1A-203ENST00000424536 KIF14Q15058 1648 aa22.02■■□□□ 1.11
GRAMD1A-203ENST00000424536 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
GRAMD1A-203ENST00000424536 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
GRAMD1A-203ENST00000424536 PLCH2O75038 1416 aa21.98■■□□□ 1.11
GRAMD1A-203ENST00000424536 EFCAB2Q5VUJ9 269 aa21.97■■□□□ 1.11
GRAMD1A-203ENST00000424536 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
GRAMD1A-203ENST00000424536 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
GRAMD1A-203ENST00000424536 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
GRAMD1A-203ENST00000424536 MYO5CQ9NQX4 1742 aa21.95■■□□□ 1.1
GRAMD1A-203ENST00000424536 KDM4FA0A1W2PPD8 638 aa21.95■■□□□ 1.1
GRAMD1A-203ENST00000424536 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
GRAMD1A-203ENST00000424536 ADGRL1O94910 1474 aa21.9■■□□□ 1.1
GRAMD1A-203ENST00000424536 ARHGAP5Q13017 1502 aa21.88■■□□□ 1.09
GRAMD1A-203ENST00000424536 SCAPERQ9BY12 1400 aa21.86■■□□□ 1.09
GRAMD1A-203ENST00000424536 RICTORQ6R327 1708 aa21.86■■□□□ 1.09
GRAMD1A-203ENST00000424536 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
GRAMD1A-203ENST00000424536 FRMPD1Q5SYB0 1578 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms