RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 KIAA0586Q9BVV6 1533 aa31.47■■■□□ 2.63
PRNP-202ENST00000424424 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
PRNP-202ENST00000424424 RAPGEF2Q9Y4G8 1499 aa31.44■■■□□ 2.62
PRNP-202ENST00000424424 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
PRNP-202ENST00000424424 CHIC1Q5VXU3 224 aa31.31■■■□□ 2.6
PRNP-202ENST00000424424 EEA1Q15075 1411 aa31.29■■■□□ 2.6
PRNP-202ENST00000424424 IQGAP2Q13576 1575 aa31.29■■■□□ 2.6
PRNP-202ENST00000424424 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.59
PRNP-202ENST00000424424 PRXQ9BXM0 1461 aa31.26■■■□□ 2.59
PRNP-202ENST00000424424 CTTNBP2Q8WZ74 1663 aa31.2■■■□□ 2.59
PRNP-202ENST00000424424 CARMIL2Q6F5E8 1435 aa31.18■■■□□ 2.58
PRNP-202ENST00000424424 TRHP20396 242 aaPredicted RBP31.18■■■□□ 2.58
PRNP-202ENST00000424424 FAM9AQ8IZU1 332 aaPredicted RBP31.13■■■□□ 2.57
PRNP-202ENST00000424424 UGGT2Q9NYU1 1516 aa31.09■■■□□ 2.57
PRNP-202ENST00000424424 TNIKQ9UKE5 1360 aa31.05■■■□□ 2.56
PRNP-202ENST00000424424 PTPRGP23470 1445 aa31.04■■■□□ 2.56
PRNP-202ENST00000424424 DISP1Q96F81 1524 aa31.03■■■□□ 2.56
PRNP-202ENST00000424424 TTBK1Q5TCY1 1321 aaPredicted RBP30.99■■■□□ 2.55
PRNP-202ENST00000424424 NPM1P06748 294 aaKnown RBP eCLIP30.98■■■□□ 2.55
PRNP-202ENST00000424424 KIAA0556O60303 1618 aa30.98■■■□□ 2.55
PRNP-202ENST00000424424 GOLGA3Q08378 1498 aa30.96■■■□□ 2.55
PRNP-202ENST00000424424 KIF21BO75037 1637 aa30.95■■■□□ 2.55
PRNP-202ENST00000424424 ADCY10Q96PN6 1610 aa30.95■■■□□ 2.54
PRNP-202ENST00000424424 UACAQ9BZF9 1416 aa30.82■■■□□ 2.52
PRNP-202ENST00000424424 UHRF1BP1LA0JNW5 1464 aa30.8■■■□□ 2.52
PRNP-202ENST00000424424 MAPKBP1O60336 1514 aa30.78■■■□□ 2.52
PRNP-202ENST00000424424 ABCC2Q92887 1545 aa30.77■■■□□ 2.52
PRNP-202ENST00000424424 UBTFP17480 764 aaKnown RBP30.74■■■□□ 2.51
PRNP-202ENST00000424424 EHMT2Q96KQ7 1210 aa30.73■■■□□ 2.51
PRNP-202ENST00000424424 SAMD9Q5K651 1589 aa30.73■■■□□ 2.51
PRNP-202ENST00000424424 P3H3Q8IVL6 736 aa30.72■■■□□ 2.51
PRNP-202ENST00000424424 KIF13AQ9H1H9 1805 aa30.7■■■□□ 2.51
PRNP-202ENST00000424424 RANGAP1P46060 587 aaPredicted RBP30.7■■■□□ 2.51
PRNP-202ENST00000424424 PLB1Q6P1J6 1458 aa30.66■■■□□ 2.5
PRNP-202ENST00000424424 ABCC10Q5T3U5 1492 aa30.65■■■□□ 2.5
PRNP-202ENST00000424424 KDM5BQ9UGL1 1544 aa30.64■■■□□ 2.5
PRNP-202ENST00000424424 ABCA8O94911 1581 aa30.63■■■□□ 2.49
PRNP-202ENST00000424424 FAM69CQ0P6D2 419 aa30.62■■■□□ 2.49
PRNP-202ENST00000424424 ZCCHC11Q5TAX3 1644 aaKnown RBP30.62■■■□□ 2.49
PRNP-202ENST00000424424 EFCAB5A4FU69 1503 aa30.6■■■□□ 2.49
PRNP-202ENST00000424424 DIP2BQ9P265 1576 aa30.6■■■□□ 2.49
PRNP-202ENST00000424424 ASXL2Q76L83 1435 aa30.58■■■□□ 2.49
PRNP-202ENST00000424424 FHOD3Q2V2M9 1422 aa30.53■■■□□ 2.48
PRNP-202ENST00000424424 RAPGEF6Q8TEU7 1601 aa30.5■■■□□ 2.47
PRNP-202ENST00000424424 TSPOAP1O95153 1857 aa30.43■■■□□ 2.46
PRNP-202ENST00000424424 AEBP2Q6ZN18 517 aaPredicted RBP30.43■■■□□ 2.46
PRNP-202ENST00000424424 GLI2P10070 1586 aa30.42■■■□□ 2.46
PRNP-202ENST00000424424 WDR7Q9Y4E6 1490 aa30.41■■■□□ 2.46
PRNP-202ENST00000424424 EPRSP07814 1512 aaKnown RBP30.39■■■□□ 2.46
PRNP-202ENST00000424424 ATP10BO94823 1461 aa30.38■■■□□ 2.45
PRNP-202ENST00000424424 ARHGAP35Q9NRY4 1499 aa30.38■■■□□ 2.45
PRNP-202ENST00000424424 ARID3CA6NKF2 412 aa30.38■■■□□ 2.45
PRNP-202ENST00000424424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.34■■■□□ 2.45
PRNP-202ENST00000424424 HNRNPUL2Q1KMD3 747 aaKnown RBP30.34■■■□□ 2.45
PRNP-202ENST00000424424 FMN1Q68DA7 1419 aa30.33■■■□□ 2.45
PRNP-202ENST00000424424 NUP153P49790 1475 aaKnown RBP30.32■■■□□ 2.44
PRNP-202ENST00000424424 KCNH8Q96L42 1107 aa30.3■■■□□ 2.44
PRNP-202ENST00000424424 MAP3K4Q9Y6R4 1608 aa30.29■■■□□ 2.44
PRNP-202ENST00000424424 PPRC1Q5VV67 1664 aaKnown RBP30.23■■■□□ 2.43
PRNP-202ENST00000424424 CFAP43Q8NDM7 1665 aa30.23■■■□□ 2.43
PRNP-202ENST00000424424 ATP1B4Q9UN42 357 aaPredicted RBP30.21■■■□□ 2.43
PRNP-202ENST00000424424 HECW1Q76N89 1606 aa30.21■■■□□ 2.43
PRNP-202ENST00000424424 CLIP1P30622 1438 aa30.2■■■□□ 2.42
PRNP-202ENST00000424424 TEX14Q8IWB6 1497 aa30.19■■■□□ 2.42
PRNP-202ENST00000424424 KDM6BO15054 1643 aa30.19■■■□□ 2.42
PRNP-202ENST00000424424 PLEKHD1A6NEE1 506 aa30.18■■■□□ 2.42
PRNP-202ENST00000424424 CD109Q6YHK3 1445 aa30.16■■■□□ 2.42
PRNP-202ENST00000424424 CDK13Q14004 1512 aaKnown RBP30.11■■■□□ 2.41
PRNP-202ENST00000424424 MAGI3Q5TCQ9 1506 aa30.1■■■□□ 2.41
PRNP-202ENST00000424424 ABCA9Q8IUA7 1624 aa30.1■■■□□ 2.41
PRNP-202ENST00000424424 CDK11AQ9UQ88 783 aaPredicted RBP30.06■■■□□ 2.4
PRNP-202ENST00000424424 CASKIN1Q8WXD9 1431 aa30.05■■■□□ 2.4
PRNP-202ENST00000424424 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
PRNP-202ENST00000424424 LOC105371045A0A1W2PR82 267 aa30.03■■■□□ 2.4
PRNP-202ENST00000424424 CEP162Q5TB80 1403 aa30.02■■■□□ 2.4
PRNP-202ENST00000424424 LRRIQ1Q96JM4 1722 aa30.02■■■□□ 2.4
PRNP-202ENST00000424424 CCDC18Q5T9S5 1454 aa29.98■■■□□ 2.39
PRNP-202ENST00000424424 FYCO1Q9BQS8 1478 aa29.98■■■□□ 2.39
PRNP-202ENST00000424424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.93■■■□□ 2.38
PRNP-202ENST00000424424 COL17A1Q9UMD9 1497 aaPredicted RBP29.91■■■□□ 2.38
PRNP-202ENST00000424424 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
PRNP-202ENST00000424424 TROQ12816 1431 aaPredicted RBP29.88■■■□□ 2.37
PRNP-202ENST00000424424 TTC37Q6PGP7 1564 aa29.88■■■□□ 2.37
PRNP-202ENST00000424424 KIF14Q15058 1648 aa29.87■■■□□ 2.37
PRNP-202ENST00000424424 NEO1Q92859 1461 aa29.87■■■□□ 2.37
PRNP-202ENST00000424424 ARAP3Q8WWN8 1544 aa29.84■■■□□ 2.37
PRNP-202ENST00000424424 CFAP74Q9C0B2 1584 aa29.83■■■□□ 2.37
PRNP-202ENST00000424424 MYO5CQ9NQX4 1742 aa29.81■■■□□ 2.36
PRNP-202ENST00000424424 FANCAO15360 1455 aa29.79■■■□□ 2.36
PRNP-202ENST00000424424 PLCH2O75038 1416 aa29.77■■■□□ 2.36
PRNP-202ENST00000424424 AKNAQ7Z591 1439 aa29.73■■■□□ 2.35
PRNP-202ENST00000424424 KDM4FA0A1W2PPD8 638 aa29.72■■■□□ 2.35
PRNP-202ENST00000424424 EFCAB2Q5VUJ9 269 aa29.69■■■□□ 2.34
PRNP-202ENST00000424424 VPS8Q8N3P4 1428 aa29.68■■■□□ 2.34
PRNP-202ENST00000424424 RAPGEF3O95398 923 aa29.67■■■□□ 2.34
PRNP-202ENST00000424424 MTUS2Q5JR59 1369 aa29.66■■■□□ 2.34
PRNP-202ENST00000424424 DENND4BO75064 1496 aaPredicted RBP29.66■■■□□ 2.34
PRNP-202ENST00000424424 ARHGAP5Q13017 1502 aa29.66■■■□□ 2.34
PRNP-202ENST00000424424 CDC42BPBQ9Y5S2 1711 aa29.63■■■□□ 2.33
PRNP-202ENST00000424424 ADGRL1O94910 1474 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms