RNA–Protein interactions for RNA: ENST00000424179.5

LINC00487-203, long intergenic non-protein coding RNA 487, humanhuman

TSL 3

Gene LINC00487, Length 602 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-203ENST00000424179 SPOCK2Q92563 424 aa8.87□□□□□ -0.99
LINC00487-203ENST00000424179 SUPT5HO00267 1087 aaKnown RBP8.85□□□□□ -0.99
LINC00487-203ENST00000424179 NUBP1P53384 320 aa8.85□□□□□ -0.99
LINC00487-203ENST00000424179 RTN4Q9NQC3 1192 aaKnown RBP8.82□□□□□ -1
LINC00487-203ENST00000424179 NPM1P06748 294 aaKnown RBP eCLIP8.81□□□□□ -1
LINC00487-203ENST00000424179 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
LINC00487-203ENST00000424179 RASEFQ8IZ41 740 aa8.8□□□□□ -1
LINC00487-203ENST00000424179 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
LINC00487-203ENST00000424179 BAZ1AQ9NRL2 1556 aaPredicted RBP8.8□□□□□ -1
LINC00487-203ENST00000424179 RSF1Q96T23 1441 aaPredicted RBP8.8□□□□□ -1
LINC00487-203ENST00000424179 HAX1O00165 279 aa8.76□□□□□ -1.01
LINC00487-203ENST00000424179 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
LINC00487-203ENST00000424179 PKD2Q13563 968 aa8.75□□□□□ -1.01
LINC00487-203ENST00000424179 EIF4G1Q04637 1599 aaKnown RBP8.74□□□□□ -1.01
LINC00487-203ENST00000424179 C19orf67A6NJJ6 358 aa8.72□□□□□ -1.01
LINC00487-203ENST00000424179 FAM212AQ96EL1 285 aa8.72□□□□□ -1.01
LINC00487-203ENST00000424179 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.02
LINC00487-203ENST00000424179 GSE1Q14687 1217 aa8.7□□□□□ -1.02
LINC00487-203ENST00000424179 DCAF8Q5TAQ9 597 aa8.7□□□□□ -1.02
LINC00487-203ENST00000424179 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
LINC00487-203ENST00000424179 TSPYL2Q9H2G4 693 aaPredicted RBP8.7□□□□□ -1.02
LINC00487-203ENST00000424179 WIZO95785 1651 aa8.69□□□□□ -1.02
LINC00487-203ENST00000424179 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
LINC00487-203ENST00000424179 ATAD2BQ9ULI0 1458 aa8.68□□□□□ -1.02
LINC00487-203ENST00000424179 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
LINC00487-203ENST00000424179 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
LINC00487-203ENST00000424179 EVX2Q03828 476 aa8.65□□□□□ -1.02
LINC00487-203ENST00000424179 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.03
LINC00487-203ENST00000424179 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.03
LINC00487-203ENST00000424179 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
LINC00487-203ENST00000424179 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
LINC00487-203ENST00000424179 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
LINC00487-203ENST00000424179 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
LINC00487-203ENST00000424179 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
LINC00487-203ENST00000424179 BAZ1BQ9UIG0 1483 aaKnown RBP8.63□□□□□ -1.03
LINC00487-203ENST00000424179 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
LINC00487-203ENST00000424179 PYGBP11216 843 aa8.61□□□□□ -1.03
LINC00487-203ENST00000424179 ZNF579Q8NAF0 562 aaKnown RBP8.61□□□□□ -1.03
LINC00487-203ENST00000424179 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
LINC00487-203ENST00000424179 RNF25Q96BH1 459 aaPredicted RBP8.6□□□□□ -1.03
LINC00487-203ENST00000424179 PHF12Q96QT6 1004 aa8.6□□□□□ -1.03
LINC00487-203ENST00000424179 RGL2O15211 777 aa8.59□□□□□ -1.03
LINC00487-203ENST00000424179 KIF12Q96FN5 646 aa8.58□□□□□ -1.04
LINC00487-203ENST00000424179 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
LINC00487-203ENST00000424179 MAP3K13O43283 966 aa8.55□□□□□ -1.04
LINC00487-203ENST00000424179 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
LINC00487-203ENST00000424179 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
LINC00487-203ENST00000424179 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
LINC00487-203ENST00000424179 IFNL1Q8IU54 200 aa8.51□□□□□ -1.05
LINC00487-203ENST00000424179 PCDHB13Q9Y5F0 798 aa8.51□□□□□ -1.05
LINC00487-203ENST00000424179 MS4A3Q96HJ5 214 aa8.5□□□□□ -1.05
LINC00487-203ENST00000424179 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
LINC00487-203ENST00000424179 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
LINC00487-203ENST00000424179 GALR2O43603 387 aaPredicted RBP8.47□□□□□ -1.05
LINC00487-203ENST00000424179 VGFO15240 615 aaPredicted RBP8.46□□□□□ -1.06
LINC00487-203ENST00000424179 TRPC6Q9Y210 931 aa8.46□□□□□ -1.06
LINC00487-203ENST00000424179 GABBR2O75899 941 aa8.45□□□□□ -1.06
LINC00487-203ENST00000424179 CLCN6P51797 869 aa8.44□□□□□ -1.06
LINC00487-203ENST00000424179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
LINC00487-203ENST00000424179 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
LINC00487-203ENST00000424179 PDAP1Q13442 181 aaKnown RBP8.42□□□□□ -1.06
LINC00487-203ENST00000424179 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
LINC00487-203ENST00000424179 PSEN1P49768 467 aa8.41□□□□□ -1.06
LINC00487-203ENST00000424179 HS6ST3Q8IZP7 471 aa8.4□□□□□ -1.06
LINC00487-203ENST00000424179 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.06
LINC00487-203ENST00000424179 CFTRP13569 1480 aa8.39□□□□□ -1.07
LINC00487-203ENST00000424179 CHGAP10645 457 aaKnown RBP8.39□□□□□ -1.07
LINC00487-203ENST00000424179 TIE1P35590 1138 aa8.38□□□□□ -1.07
LINC00487-203ENST00000424179 BMP2KQ9NSY1 1161 aaPredicted RBP8.38□□□□□ -1.07
LINC00487-203ENST00000424179 NESP48681 1621 aa8.38□□□□□ -1.07
LINC00487-203ENST00000424179 STK25O00506 426 aa8.37□□□□□ -1.07
LINC00487-203ENST00000424179 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
LINC00487-203ENST00000424179 TTLL13PA6NNM8 815 aa8.36□□□□□ -1.07
LINC00487-203ENST00000424179 TMEM106CQ9BVX2 250 aa8.36□□□□□ -1.07
LINC00487-203ENST00000424179 DNAJC5Q9H3Z4 198 aa8.35□□□□□ -1.07
LINC00487-203ENST00000424179 STK24Q9Y6E0 443 aa8.34□□□□□ -1.07
LINC00487-203ENST00000424179 LAMC3Q9Y6N6 1575 aa8.34□□□□□ -1.07
LINC00487-203ENST00000424179 ASTLQ6HA08 431 aaPredicted RBP8.33□□□□□ -1.08
LINC00487-203ENST00000424179 PDS5BQ9NTI5 1447 aa8.32□□□□□ -1.08
LINC00487-203ENST00000424179 ATMINO43313 823 aaPredicted RBP8.32□□□□□ -1.08
LINC00487-203ENST00000424179 POTEIP0CG38 1075 aa8.32□□□□□ -1.08
LINC00487-203ENST00000424179 NKX1-1Q15270 411 aaPredicted RBP8.32□□□□□ -1.08
LINC00487-203ENST00000424179 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
LINC00487-203ENST00000424179 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
LINC00487-203ENST00000424179 FANCD2Q9BXW9 1451 aa8.31□□□□□ -1.08
LINC00487-203ENST00000424179 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
LINC00487-203ENST00000424179 BBXQ8WY36 941 aaPredicted RBP8.3□□□□□ -1.08
LINC00487-203ENST00000424179 CABP2Q9NPB3 220 aa8.3□□□□□ -1.08
LINC00487-203ENST00000424179 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
LINC00487-203ENST00000424179 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
LINC00487-203ENST00000424179 EFCAB3Q8N7B9 438 aa8.28□□□□□ -1.08
LINC00487-203ENST00000424179 DCBLD2Q96PD2 775 aa8.28□□□□□ -1.08
LINC00487-203ENST00000424179 TRIM35Q9UPQ4 493 aa8.28□□□□□ -1.08
LINC00487-203ENST00000424179 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
LINC00487-203ENST00000424179 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
LINC00487-203ENST00000424179 MFRPQ9BY79 579 aa8.24□□□□□ -1.09
LINC00487-203ENST00000424179 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
LINC00487-203ENST00000424179 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
LINC00487-203ENST00000424179 SOX12O15370 315 aa8.22□□□□□ -1.09
LINC00487-203ENST00000424179 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms