RNA–Protein interactions for RNA: ENST00000424179.5

LINC00487-203, long intergenic non-protein coding RNA 487, humanhuman

TSL 3

Gene LINC00487, Length 602 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-203ENST00000424179 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
LINC00487-203ENST00000424179 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
LINC00487-203ENST00000424179 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
LINC00487-203ENST00000424179 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
LINC00487-203ENST00000424179 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
LINC00487-203ENST00000424179 FOXD1Q16676 465 aa13.28□□□□□ -0.28
LINC00487-203ENST00000424179 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
LINC00487-203ENST00000424179 ADRA2BP18089 450 aa12.79□□□□□ -0.36
LINC00487-203ENST00000424179 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
LINC00487-203ENST00000424179 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
LINC00487-203ENST00000424179 MSH5O43196 834 aa12.18□□□□□ -0.46
LINC00487-203ENST00000424179 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
LINC00487-203ENST00000424179 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
LINC00487-203ENST00000424179 KCNA4P22459 653 aa11.62□□□□□ -0.55
LINC00487-203ENST00000424179 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
LINC00487-203ENST00000424179 NCBP3Q53F19 620 aaKnown RBP11.47□□□□□ -0.57
LINC00487-203ENST00000424179 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
LINC00487-203ENST00000424179 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
LINC00487-203ENST00000424179 NISCHQ9Y2I1 1504 aa11.39□□□□□ -0.59
LINC00487-203ENST00000424179 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
LINC00487-203ENST00000424179 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
LINC00487-203ENST00000424179 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
LINC00487-203ENST00000424179 DNAJC5BQ9UF47 199 aa11.08□□□□□ -0.64
LINC00487-203ENST00000424179 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
LINC00487-203ENST00000424179 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
LINC00487-203ENST00000424179 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
LINC00487-203ENST00000424179 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
LINC00487-203ENST00000424179 ZBTB22O15209 634 aa10.73□□□□□ -0.69
LINC00487-203ENST00000424179 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
LINC00487-203ENST00000424179 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
LINC00487-203ENST00000424179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00487-203ENST00000424179 U3KPZ7 1027 aaPredicted RBP10.52□□□□□ -0.73
LINC00487-203ENST00000424179 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
LINC00487-203ENST00000424179 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
LINC00487-203ENST00000424179 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
LINC00487-203ENST00000424179 C1QBPQ07021 282 aaKnown RBP10.33□□□□□ -0.76
LINC00487-203ENST00000424179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
LINC00487-203ENST00000424179 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
LINC00487-203ENST00000424179 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
LINC00487-203ENST00000424179 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
LINC00487-203ENST00000424179 ATF5Q9Y2D1 282 aaPredicted RBP10.25□□□□□ -0.77
LINC00487-203ENST00000424179 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
LINC00487-203ENST00000424179 APLP2Q06481 763 aa10.18□□□□□ -0.78
LINC00487-203ENST00000424179 CAPN15O75808 1086 aa10.11□□□□□ -0.79
LINC00487-203ENST00000424179 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
LINC00487-203ENST00000424179 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
LINC00487-203ENST00000424179 DSG3P32926 999 aa9.98□□□□□ -0.81
LINC00487-203ENST00000424179 ABCB7O75027 752 aa9.95□□□□□ -0.82
LINC00487-203ENST00000424179 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
LINC00487-203ENST00000424179 POLA2Q14181 598 aa9.94□□□□□ -0.82
LINC00487-203ENST00000424179 MKRN4PQ13434 485 aaPredicted RBP9.81□□□□□ -0.84
LINC00487-203ENST00000424179 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
LINC00487-203ENST00000424179 FBLN2P98095 1184 aa9.72□□□□□ -0.85
LINC00487-203ENST00000424179 OSCARQ8IYS5 282 aa9.62□□□□□ -0.87
LINC00487-203ENST00000424179 ABCC9O60706 1549 aa9.61□□□□□ -0.87
LINC00487-203ENST00000424179 FKBP8Q14318 412 aa9.6□□□□□ -0.87
LINC00487-203ENST00000424179 POTEHQ6S545 545 aa9.59□□□□□ -0.87
LINC00487-203ENST00000424179 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
LINC00487-203ENST00000424179 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
LINC00487-203ENST00000424179 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
LINC00487-203ENST00000424179 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
LINC00487-203ENST00000424179 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
LINC00487-203ENST00000424179 ZCCHC6Q5VYS8 1495 aaKnown RBP9.52□□□□□ -0.89
LINC00487-203ENST00000424179 SSUH2Q9Y2M2 353 aa9.5□□□□□ -0.89
LINC00487-203ENST00000424179 PROM2Q8N271 834 aa9.47□□□□□ -0.89
LINC00487-203ENST00000424179 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
LINC00487-203ENST00000424179 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
LINC00487-203ENST00000424179 DCAF1Q9Y4B6 1507 aa9.39□□□□□ -0.91
LINC00487-203ENST00000424179 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
LINC00487-203ENST00000424179 PABPN1Q86U42 306 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00487-203ENST00000424179 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
LINC00487-203ENST00000424179 NACADO15069 1562 aa9.33□□□□□ -0.92
LINC00487-203ENST00000424179 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
LINC00487-203ENST00000424179 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
LINC00487-203ENST00000424179 SHROOM4Q9ULL8 1493 aa9.25□□□□□ -0.93
LINC00487-203ENST00000424179 PITPNM1O00562 1244 aa9.21□□□□□ -0.94
LINC00487-203ENST00000424179 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
LINC00487-203ENST00000424179 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
LINC00487-203ENST00000424179 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
LINC00487-203ENST00000424179 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
LINC00487-203ENST00000424179 CLEC11AQ9Y240 323 aa9.15□□□□□ -0.94
LINC00487-203ENST00000424179 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
LINC00487-203ENST00000424179 CHRDL2Q6WN34 429 aa9.1□□□□□ -0.95
LINC00487-203ENST00000424179 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
LINC00487-203ENST00000424179 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
LINC00487-203ENST00000424179 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00487-203ENST00000424179 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.97
LINC00487-203ENST00000424179 MIER1Q8N108 512 aa9.02□□□□□ -0.97
LINC00487-203ENST00000424179 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
LINC00487-203ENST00000424179 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
LINC00487-203ENST00000424179 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
LINC00487-203ENST00000424179 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
LINC00487-203ENST00000424179 MNX1P50219 401 aaPredicted RBP8.98□□□□□ -0.97
LINC00487-203ENST00000424179 CHADLQ6NUI6 762 aa8.97□□□□□ -0.97
LINC00487-203ENST00000424179 PRKAR2AP13861 404 aaKnown RBP8.94□□□□□ -0.98
LINC00487-203ENST00000424179 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
LINC00487-203ENST00000424179 KLHL34Q8N239 644 aa8.9□□□□□ -0.98
LINC00487-203ENST00000424179 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
LINC00487-203ENST00000424179 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
LINC00487-203ENST00000424179 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms