RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 NUP160Q12769 1436 aa28.18■■■□□ 2.1
FOXN4-203ENST00000423960 CEP170Q5SW79 1584 aa28.17■■■□□ 2.1
FOXN4-203ENST00000423960 RAPGEF2Q9Y4G8 1499 aa28.13■■■□□ 2.09
FOXN4-203ENST00000423960 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
FOXN4-203ENST00000423960 ERCC6L2Q5T890 1561 aa28.04■■■□□ 2.08
FOXN4-203ENST00000423960 TRHP20396 242 aaPredicted RBP27.99■■■□□ 2.07
FOXN4-203ENST00000423960 JPH4Q96JJ6 628 aa27.95■■■□□ 2.06
FOXN4-203ENST00000423960 SHROOM2Q13796 1616 aa27.95■■■□□ 2.06
FOXN4-203ENST00000423960 KIAA0586Q9BVV6 1533 aa27.94■■■□□ 2.06
FOXN4-203ENST00000423960 PRG4Q92954 1404 aaPredicted RBP27.92■■■□□ 2.06
FOXN4-203ENST00000423960 KIF21BO75037 1637 aa27.88■■■□□ 2.05
FOXN4-203ENST00000423960 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
FOXN4-203ENST00000423960 UBTFP17480 764 aaKnown RBP27.8■■■□□ 2.04
FOXN4-203ENST00000423960 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
FOXN4-203ENST00000423960 IQGAP2Q13576 1575 aa27.78■■■□□ 2.04
FOXN4-203ENST00000423960 CTTNBP2Q8WZ74 1663 aa27.71■■■□□ 2.03
FOXN4-203ENST00000423960 UGGT2Q9NYU1 1516 aa27.66■■■□□ 2.02
FOXN4-203ENST00000423960 CARMIL2Q6F5E8 1435 aa27.66■■■□□ 2.02
FOXN4-203ENST00000423960 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
FOXN4-203ENST00000423960 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
FOXN4-203ENST00000423960 LOC105371045A0A1W2PR82 267 aa27.6■■■□□ 2.01
FOXN4-203ENST00000423960 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
FOXN4-203ENST00000423960 TNIKQ9UKE5 1360 aa27.55■■■□□ 2
FOXN4-203ENST00000423960 NPM1P06748 294 aaKnown RBP eCLIP27.54■■■□□ 2
FOXN4-203ENST00000423960 PTPRGP23470 1445 aa27.54■■■□□ 2
FOXN4-203ENST00000423960 P3H3Q8IVL6 736 aa27.52■■■□□ 2
FOXN4-203ENST00000423960 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
FOXN4-203ENST00000423960 ADCY10Q96PN6 1610 aa27.49■■□□□ 1.99
FOXN4-203ENST00000423960 SAMD9Q5K651 1589 aa27.42■■□□□ 1.98
FOXN4-203ENST00000423960 EFCAB5A4FU69 1503 aa27.4■■□□□ 1.98
FOXN4-203ENST00000423960 FAM69CQ0P6D2 419 aa27.38■■□□□ 1.97
FOXN4-203ENST00000423960 MAPKBP1O60336 1514 aa27.37■■□□□ 1.97
FOXN4-203ENST00000423960 FHOD3Q2V2M9 1422 aa27.35■■□□□ 1.97
FOXN4-203ENST00000423960 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
FOXN4-203ENST00000423960 CLIP1P30622 1438 aa27.33■■□□□ 1.97
FOXN4-203ENST00000423960 ABCC10Q5T3U5 1492 aa27.33■■□□□ 1.97
FOXN4-203ENST00000423960 UACAQ9BZF9 1416 aa27.32■■□□□ 1.96
FOXN4-203ENST00000423960 ABCC2Q92887 1545 aa27.31■■□□□ 1.96
FOXN4-203ENST00000423960 KIF13AQ9H1H9 1805 aa27.3■■□□□ 1.96
FOXN4-203ENST00000423960 CEP162Q5TB80 1403 aa27.28■■□□□ 1.96
FOXN4-203ENST00000423960 UHRF1BP1LA0JNW5 1464 aa27.27■■□□□ 1.96
FOXN4-203ENST00000423960 DIP2BQ9P265 1576 aa27.26■■□□□ 1.95
FOXN4-203ENST00000423960 PLB1Q6P1J6 1458 aa27.25■■□□□ 1.95
FOXN4-203ENST00000423960 FMN1Q68DA7 1419 aa27.2■■□□□ 1.94
FOXN4-203ENST00000423960 ASXL2Q76L83 1435 aa27.2■■□□□ 1.94
FOXN4-203ENST00000423960 ABCA8O94911 1581 aa27.19■■□□□ 1.94
FOXN4-203ENST00000423960 KDM5BQ9UGL1 1544 aa27.16■■□□□ 1.94
FOXN4-203ENST00000423960 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
FOXN4-203ENST00000423960 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
FOXN4-203ENST00000423960 ARID3CA6NKF2 412 aa27.09■■□□□ 1.93
FOXN4-203ENST00000423960 ZCCHC11Q5TAX3 1644 aaKnown RBP27.08■■□□□ 1.93
FOXN4-203ENST00000423960 NUP153P49790 1475 aaKnown RBP27.05■■□□□ 1.92
FOXN4-203ENST00000423960 ATP10BO94823 1461 aa27.04■■□□□ 1.92
FOXN4-203ENST00000423960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.03■■□□□ 1.92
FOXN4-203ENST00000423960 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
FOXN4-203ENST00000423960 CASKIN1Q8WXD9 1431 aa27.02■■□□□ 1.92
FOXN4-203ENST00000423960 EPRSP07814 1512 aaKnown RBP27.01■■□□□ 1.91
FOXN4-203ENST00000423960 TSPOAP1O95153 1857 aa27.01■■□□□ 1.91
FOXN4-203ENST00000423960 GLI2P10070 1586 aa27.01■■□□□ 1.91
FOXN4-203ENST00000423960 WDR7Q9Y4E6 1490 aa26.97■■□□□ 1.91
FOXN4-203ENST00000423960 HECW1Q76N89 1606 aa26.95■■□□□ 1.91
FOXN4-203ENST00000423960 KCNH8Q96L42 1107 aa26.94■■□□□ 1.9
FOXN4-203ENST00000423960 KDM6BO15054 1643 aa26.94■■□□□ 1.9
FOXN4-203ENST00000423960 FYCO1Q9BQS8 1478 aa26.93■■□□□ 1.9
FOXN4-203ENST00000423960 PCF11O94913 1555 aaKnown RBP26.93■■□□□ 1.9
FOXN4-203ENST00000423960 VPS8Q8N3P4 1428 aa26.93■■□□□ 1.9
FOXN4-203ENST00000423960 PLEKHD1A6NEE1 506 aa26.91■■□□□ 1.9
FOXN4-203ENST00000423960 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.89
FOXN4-203ENST00000423960 CDK11AQ9UQ88 783 aaPredicted RBP26.88■■□□□ 1.89
FOXN4-203ENST00000423960 PPRC1Q5VV67 1664 aaKnown RBP26.88■■□□□ 1.89
FOXN4-203ENST00000423960 MAP3K4Q9Y6R4 1608 aa26.87■■□□□ 1.89
FOXN4-203ENST00000423960 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
FOXN4-203ENST00000423960 CCDC18Q5T9S5 1454 aa26.85■■□□□ 1.89
FOXN4-203ENST00000423960 CD109Q6YHK3 1445 aa26.8■■□□□ 1.88
FOXN4-203ENST00000423960 TEX14Q8IWB6 1497 aa26.8■■□□□ 1.88
FOXN4-203ENST00000423960 LRRIQ1Q96JM4 1722 aa26.77■■□□□ 1.88
FOXN4-203ENST00000423960 COL17A1Q9UMD9 1497 aaPredicted RBP26.77■■□□□ 1.88
FOXN4-203ENST00000423960 APLP2Q06481 763 aa26.73■■□□□ 1.87
FOXN4-203ENST00000423960 TROQ12816 1431 aaPredicted RBP26.72■■□□□ 1.87
FOXN4-203ENST00000423960 MAGI3Q5TCQ9 1506 aa26.71■■□□□ 1.87
FOXN4-203ENST00000423960 CFAP43Q8NDM7 1665 aa26.7■■□□□ 1.86
FOXN4-203ENST00000423960 MTUS2Q5JR59 1369 aa26.67■■□□□ 1.86
FOXN4-203ENST00000423960 MAP3K1Q13233 1512 aa26.64■■□□□ 1.85
FOXN4-203ENST00000423960 TIAM1Q13009 1591 aa26.63■■□□□ 1.85
FOXN4-203ENST00000423960 ABCA9Q8IUA7 1624 aa26.6■■□□□ 1.85
FOXN4-203ENST00000423960 KANK4Q5T7N3 995 aaPredicted RBP26.59■■□□□ 1.85
FOXN4-203ENST00000423960 KDM4FA0A1W2PPD8 638 aa26.58■■□□□ 1.85
FOXN4-203ENST00000423960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.58■■□□□ 1.85
FOXN4-203ENST00000423960 LRRC9Q6ZRR7 1453 aa26.56■■□□□ 1.84
FOXN4-203ENST00000423960 KIF14Q15058 1648 aa26.56■■□□□ 1.84
FOXN4-203ENST00000423960 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
FOXN4-203ENST00000423960 TTC37Q6PGP7 1564 aa26.5■■□□□ 1.83
FOXN4-203ENST00000423960 ARAP3Q8WWN8 1544 aa26.49■■□□□ 1.83
FOXN4-203ENST00000423960 PLCH2O75038 1416 aa26.48■■□□□ 1.83
FOXN4-203ENST00000423960 PHLDB1Q86UU1 1377 aa26.46■■□□□ 1.83
FOXN4-203ENST00000423960 NEO1Q92859 1461 aa26.45■■□□□ 1.82
FOXN4-203ENST00000423960 RAPGEF3O95398 923 aa26.45■■□□□ 1.82
FOXN4-203ENST00000423960 CCNB3Q8WWL7 1395 aa26.45■■□□□ 1.82
FOXN4-203ENST00000423960 EFCAB2Q5VUJ9 269 aa26.43■■□□□ 1.82
FOXN4-203ENST00000423960 ADGRL1O94910 1474 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms