RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
CMC1-204ENST00000423894 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
CMC1-204ENST00000423894 KIAA0586Q9BVV6 1533 aa24.66■■□□□ 1.54
CMC1-204ENST00000423894 CUL7Q14999 1698 aa24.62■■□□□ 1.53
CMC1-204ENST00000423894 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
CMC1-204ENST00000423894 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
CMC1-204ENST00000423894 PTPRGP23470 1445 aa24.44■■□□□ 1.5
CMC1-204ENST00000423894 NPM1P06748 294 aaKnown RBP eCLIP24.41■■□□□ 1.5
CMC1-204ENST00000423894 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
CMC1-204ENST00000423894 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
CMC1-204ENST00000423894 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
CMC1-204ENST00000423894 PRXQ9BXM0 1461 aa24.37■■□□□ 1.49
CMC1-204ENST00000423894 DISP1Q96F81 1524 aa24.36■■□□□ 1.49
CMC1-204ENST00000423894 ADCY10Q96PN6 1610 aa24.36■■□□□ 1.49
CMC1-204ENST00000423894 FAM69CQ0P6D2 419 aa24.35■■□□□ 1.49
CMC1-204ENST00000423894 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
CMC1-204ENST00000423894 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
CMC1-204ENST00000423894 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
CMC1-204ENST00000423894 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
CMC1-204ENST00000423894 ABCC10Q5T3U5 1492 aa24.25■■□□□ 1.47
CMC1-204ENST00000423894 UACAQ9BZF9 1416 aa24.23■■□□□ 1.47
CMC1-204ENST00000423894 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
CMC1-204ENST00000423894 P3H3Q8IVL6 736 aa24.2■■□□□ 1.46
CMC1-204ENST00000423894 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
CMC1-204ENST00000423894 KIAA0556O60303 1618 aa24.17■■□□□ 1.46
CMC1-204ENST00000423894 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
CMC1-204ENST00000423894 UHRF1BP1LA0JNW5 1464 aa24.16■■□□□ 1.46
CMC1-204ENST00000423894 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.45
CMC1-204ENST00000423894 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
CMC1-204ENST00000423894 PLB1Q6P1J6 1458 aa24.13■■□□□ 1.45
CMC1-204ENST00000423894 DIP2BQ9P265 1576 aa24.12■■□□□ 1.45
CMC1-204ENST00000423894 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
CMC1-204ENST00000423894 EEA1Q15075 1411 aa24.09■■□□□ 1.45
CMC1-204ENST00000423894 CTTNBP2Q8WZ74 1663 aa24.08■■□□□ 1.44
CMC1-204ENST00000423894 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
CMC1-204ENST00000423894 KDM5BQ9UGL1 1544 aa24.07■■□□□ 1.44
CMC1-204ENST00000423894 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
CMC1-204ENST00000423894 ABCA8O94911 1581 aa23.98■■□□□ 1.43
CMC1-204ENST00000423894 EPRSP07814 1512 aaKnown RBP23.97■■□□□ 1.43
CMC1-204ENST00000423894 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
CMC1-204ENST00000423894 ZCCHC11Q5TAX3 1644 aaKnown RBP23.95■■□□□ 1.43
CMC1-204ENST00000423894 TSPOAP1O95153 1857 aa23.94■■□□□ 1.42
CMC1-204ENST00000423894 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
CMC1-204ENST00000423894 GLI2P10070 1586 aa23.91■■□□□ 1.42
CMC1-204ENST00000423894 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
CMC1-204ENST00000423894 ATP10BO94823 1461 aa23.88■■□□□ 1.41
CMC1-204ENST00000423894 WDR7Q9Y4E6 1490 aa23.88■■□□□ 1.41
CMC1-204ENST00000423894 SAMD9Q5K651 1589 aa23.87■■□□□ 1.41
CMC1-204ENST00000423894 KIF21BO75037 1637 aa23.85■■□□□ 1.41
CMC1-204ENST00000423894 COL17A1Q9UMD9 1497 aaPredicted RBP23.85■■□□□ 1.41
CMC1-204ENST00000423894 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
CMC1-204ENST00000423894 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.4
CMC1-204ENST00000423894 KDM6BO15054 1643 aa23.81■■□□□ 1.4
CMC1-204ENST00000423894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
CMC1-204ENST00000423894 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
CMC1-204ENST00000423894 CD109Q6YHK3 1445 aa23.77■■□□□ 1.4
CMC1-204ENST00000423894 MAP3K4Q9Y6R4 1608 aa23.77■■□□□ 1.4
CMC1-204ENST00000423894 NUP153P49790 1475 aaKnown RBP23.75■■□□□ 1.39
CMC1-204ENST00000423894 RAPGEF6Q8TEU7 1601 aa23.72■■□□□ 1.39
CMC1-204ENST00000423894 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
CMC1-204ENST00000423894 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
CMC1-204ENST00000423894 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
CMC1-204ENST00000423894 ARHGAP35Q9NRY4 1499 aa23.67■■□□□ 1.38
CMC1-204ENST00000423894 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
CMC1-204ENST00000423894 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
CMC1-204ENST00000423894 PLEKHD1A6NEE1 506 aa23.64■■□□□ 1.37
CMC1-204ENST00000423894 CDK13Q14004 1512 aaKnown RBP23.57■■□□□ 1.36
CMC1-204ENST00000423894 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
CMC1-204ENST00000423894 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
CMC1-204ENST00000423894 ABCA9Q8IUA7 1624 aa23.52■■□□□ 1.36
CMC1-204ENST00000423894 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
CMC1-204ENST00000423894 ARAP3Q8WWN8 1544 aa23.47■■□□□ 1.35
CMC1-204ENST00000423894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.44■■□□□ 1.342e-9■□□□□ 11.3
CMC1-204ENST00000423894 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
CMC1-204ENST00000423894 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
CMC1-204ENST00000423894 NEO1Q92859 1461 aa23.41■■□□□ 1.34
CMC1-204ENST00000423894 CLIP1P30622 1438 aa23.4■■□□□ 1.34
CMC1-204ENST00000423894 LOC105371045A0A1W2PR82 267 aa23.38■■□□□ 1.33
CMC1-204ENST00000423894 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
CMC1-204ENST00000423894 AKNAQ7Z591 1439 aa23.38■■□□□ 1.33
CMC1-204ENST00000423894 TTC37Q6PGP7 1564 aa23.38■■□□□ 1.33
CMC1-204ENST00000423894 HECW1Q76N89 1606 aa23.37■■□□□ 1.33
CMC1-204ENST00000423894 FANCAO15360 1455 aa23.36■■□□□ 1.33
CMC1-204ENST00000423894 CASKIN1Q8WXD9 1431 aa23.35■■□□□ 1.33
CMC1-204ENST00000423894 PLCH2O75038 1416 aa23.33■■□□□ 1.33
CMC1-204ENST00000423894 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.32
CMC1-204ENST00000423894 DENND4BO75064 1496 aaPredicted RBP23.3■■□□□ 1.32
CMC1-204ENST00000423894 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
CMC1-204ENST00000423894 FRMPD1Q5SYB0 1578 aa23.3■■□□□ 1.32
CMC1-204ENST00000423894 KIF14Q15058 1648 aa23.29■■□□□ 1.32
CMC1-204ENST00000423894 LRRIQ1Q96JM4 1722 aa23.28■■□□□ 1.32
CMC1-204ENST00000423894 EFCAB2Q5VUJ9 269 aa23.28■■□□□ 1.32
CMC1-204ENST00000423894 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
CMC1-204ENST00000423894 ARID4BQ4LE39 1312 aaPredicted RBP23.23■■□□□ 1.31
CMC1-204ENST00000423894 AFAP1Q8N556 730 aa23.21■■□□□ 1.31
CMC1-204ENST00000423894 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
CMC1-204ENST00000423894 YEATS2Q9ULM3 1422 aa23.21■■□□□ 1.31
CMC1-204ENST00000423894 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.3
CMC1-204ENST00000423894 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
CMC1-204ENST00000423894 POGZQ7Z3K3 1410 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms