RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
SREBF1-206ENST00000423161 IGF1RP08069 1367 aa32.22■■■□□ 2.75
SREBF1-206ENST00000423161 KIAA0586Q9BVV6 1533 aa32.13■■■□□ 2.73
SREBF1-206ENST00000423161 KIF13AQ9H1H9 1805 aa32.04■■■□□ 2.72
SREBF1-206ENST00000423161 CARMIL1Q5VZK9 1371 aa32.04■■■□□ 2.72
SREBF1-206ENST00000423161 ADCY10Q96PN6 1610 aa31.97■■■□□ 2.71
SREBF1-206ENST00000423161 MAPKBP1O60336 1514 aa31.89■■■□□ 2.7
SREBF1-206ENST00000423161 IQGAP2Q13576 1575 aa31.89■■■□□ 2.7
SREBF1-206ENST00000423161 NPM1P06748 294 aaKnown RBP eCLIP31.88■■■□□ 2.69
SREBF1-206ENST00000423161 ABCC10Q5T3U5 1492 aa31.82■■■□□ 2.68
SREBF1-206ENST00000423161 CARMIL2Q6F5E8 1435 aa31.81■■■□□ 2.68
SREBF1-206ENST00000423161 PTPRGP23470 1445 aa31.79■■■□□ 2.68
SREBF1-206ENST00000423161 DIP2BQ9P265 1576 aa31.79■■■□□ 2.68
SREBF1-206ENST00000423161 RAPGEF2Q9Y4G8 1499 aa31.78■■■□□ 2.68
SREBF1-206ENST00000423161 FAM69CQ0P6D2 419 aa31.75■■■□□ 2.67
SREBF1-206ENST00000423161 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
SREBF1-206ENST00000423161 TTBK1Q5TCY1 1321 aaPredicted RBP31.73■■■□□ 2.67
SREBF1-206ENST00000423161 DISP1Q96F81 1524 aa31.69■■■□□ 2.66
SREBF1-206ENST00000423161 UGGT2Q9NYU1 1516 aa31.66■■■□□ 2.66
SREBF1-206ENST00000423161 CTTNBP2Q8WZ74 1663 aa31.64■■■□□ 2.66
SREBF1-206ENST00000423161 ABCC2Q92887 1545 aa31.64■■■□□ 2.66
SREBF1-206ENST00000423161 TSPOAP1O95153 1857 aa31.63■■■□□ 2.65
SREBF1-206ENST00000423161 KIAA0556O60303 1618 aa31.6■■■□□ 2.65
SREBF1-206ENST00000423161 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
SREBF1-206ENST00000423161 UHRF1BP1LA0JNW5 1464 aa31.59■■■□□ 2.65
SREBF1-206ENST00000423161 UACAQ9BZF9 1416 aa31.56■■■□□ 2.64
SREBF1-206ENST00000423161 ASXL2Q76L83 1435 aa31.5■■■□□ 2.63
SREBF1-206ENST00000423161 KDM6BO15054 1643 aa31.49■■■□□ 2.63
SREBF1-206ENST00000423161 PLB1Q6P1J6 1458 aa31.49■■■□□ 2.63
SREBF1-206ENST00000423161 PRXQ9BXM0 1461 aa31.47■■■□□ 2.63
SREBF1-206ENST00000423161 ZCCHC11Q5TAX3 1644 aaKnown RBP31.45■■■□□ 2.62
SREBF1-206ENST00000423161 KDM5BQ9UGL1 1544 aa31.44■■■□□ 2.62
SREBF1-206ENST00000423161 GLI2P10070 1586 aa31.43■■■□□ 2.62
SREBF1-206ENST00000423161 GOLGA3Q08378 1498 aa31.41■■■□□ 2.62
SREBF1-206ENST00000423161 PPRC1Q5VV67 1664 aaKnown RBP31.39■■■□□ 2.62
SREBF1-206ENST00000423161 EPRSP07814 1512 aaKnown RBP31.33■■■□□ 2.61
SREBF1-206ENST00000423161 MAP3K4Q9Y6R4 1608 aa31.31■■■□□ 2.6
SREBF1-206ENST00000423161 ABCA8O94911 1581 aa31.28■■■□□ 2.6
SREBF1-206ENST00000423161 WDR7Q9Y4E6 1490 aa31.23■■■□□ 2.59
SREBF1-206ENST00000423161 CSRNP3Q8WYN3 585 aa31.22■■■□□ 2.59
SREBF1-206ENST00000423161 TEX14Q8IWB6 1497 aa31.17■■■□□ 2.58
SREBF1-206ENST00000423161 EEA1Q15075 1411 aa31.15■■■□□ 2.58
SREBF1-206ENST00000423161 SAMD9Q5K651 1589 aa31.13■■■□□ 2.57
SREBF1-206ENST00000423161 CFAP43Q8NDM7 1665 aa31.11■■■□□ 2.57
SREBF1-206ENST00000423161 P3H3Q8IVL6 736 aa31.1■■■□□ 2.57
SREBF1-206ENST00000423161 COL17A1Q9UMD9 1497 aaPredicted RBP31.08■■■□□ 2.57
SREBF1-206ENST00000423161 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
SREBF1-206ENST00000423161 KDM4FA0A1W2PPD8 638 aa31.03■■■□□ 2.56
SREBF1-206ENST00000423161 KCNH8Q96L42 1107 aa31.03■■■□□ 2.56
SREBF1-206ENST00000423161 CD109Q6YHK3 1445 aa31.01■■■□□ 2.55
SREBF1-206ENST00000423161 RAPGEF6Q8TEU7 1601 aa31■■■□□ 2.55
SREBF1-206ENST00000423161 MAGI3Q5TCQ9 1506 aa30.99■■■□□ 2.55
SREBF1-206ENST00000423161 ATP10BO94823 1461 aa30.98■■■□□ 2.55
SREBF1-206ENST00000423161 ARID3CA6NKF2 412 aa30.98■■■□□ 2.55
SREBF1-206ENST00000423161 KIF21BO75037 1637 aa30.96■■■□□ 2.55
SREBF1-206ENST00000423161 RANGAP1P46060 587 aaPredicted RBP30.91■■■□□ 2.54
SREBF1-206ENST00000423161 FHOD3Q2V2M9 1422 aa30.88■■■□□ 2.53
SREBF1-206ENST00000423161 ADGRL1O94910 1474 aa30.88■■■□□ 2.53
SREBF1-206ENST00000423161 ABCA9Q8IUA7 1624 aa30.87■■■□□ 2.53
SREBF1-206ENST00000423161 NUP153P49790 1475 aaKnown RBP30.83■■■□□ 2.53
SREBF1-206ENST00000423161 EFCAB5A4FU69 1503 aa30.83■■■□□ 2.53
SREBF1-206ENST00000423161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
SREBF1-206ENST00000423161 HNRNPUL2Q1KMD3 747 aaKnown RBP30.79■■■□□ 2.52
SREBF1-206ENST00000423161 ARAP3Q8WWN8 1544 aa30.75■■■□□ 2.51
SREBF1-206ENST00000423161 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
SREBF1-206ENST00000423161 EHMT2Q96KQ7 1210 aa30.67■■■□□ 2.5
SREBF1-206ENST00000423161 PHLDB1Q86UU1 1377 aa30.66■■■□□ 2.5
SREBF1-206ENST00000423161 NEO1Q92859 1461 aa30.65■■■□□ 2.5
SREBF1-206ENST00000423161 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
SREBF1-206ENST00000423161 PLEKHD1A6NEE1 506 aa30.62■■■□□ 2.49
SREBF1-206ENST00000423161 CDK13Q14004 1512 aaKnown RBP30.57■■■□□ 2.49
SREBF1-206ENST00000423161 FRMPD1Q5SYB0 1578 aa30.55■■■□□ 2.48
SREBF1-206ENST00000423161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.55■■■□□ 2.481e-6■■□□□ 11.6
SREBF1-206ENST00000423161 TTC37Q6PGP7 1564 aa30.54■■■□□ 2.48
SREBF1-206ENST00000423161 ARHGAP35Q9NRY4 1499 aa30.54■■■□□ 2.48
SREBF1-206ENST00000423161 CFAP74Q9C0B2 1584 aa30.54■■■□□ 2.48
SREBF1-206ENST00000423161 RAPGEF3O95398 923 aa30.53■■■□□ 2.48
SREBF1-206ENST00000423161 HECW1Q76N89 1606 aa30.53■■■□□ 2.48
SREBF1-206ENST00000423161 FMN1Q68DA7 1419 aa30.52■■■□□ 2.48
SREBF1-206ENST00000423161 RICTORQ6R327 1708 aa30.47■■■□□ 2.47
SREBF1-206ENST00000423161 FANCAO15360 1455 aa30.47■■■□□ 2.47
SREBF1-206ENST00000423161 HECW2Q9P2P5 1572 aa30.45■■■□□ 2.46
SREBF1-206ENST00000423161 AKNAQ7Z591 1439 aa30.44■■■□□ 2.46
SREBF1-206ENST00000423161 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
SREBF1-206ENST00000423161 DENND4BO75064 1496 aaPredicted RBP30.43■■■□□ 2.46
SREBF1-206ENST00000423161 ADAMTSL3P82987 1691 aa30.4■■■□□ 2.46
SREBF1-206ENST00000423161 ARHGEF40Q8TER5 1519 aa30.4■■■□□ 2.46
SREBF1-206ENST00000423161 LRRIQ1Q96JM4 1722 aa30.38■■■□□ 2.45
SREBF1-206ENST00000423161 MYO5CQ9NQX4 1742 aa30.37■■■□□ 2.45
SREBF1-206ENST00000423161 BCORL1Q5H9F3 1711 aa30.36■■■□□ 2.45
SREBF1-206ENST00000423161 ZMYM4Q5VZL5 1548 aa30.32■■■□□ 2.44
SREBF1-206ENST00000423161 PLCH2O75038 1416 aa30.32■■■□□ 2.44
SREBF1-206ENST00000423161 KIF14Q15058 1648 aa30.32■■■□□ 2.44
SREBF1-206ENST00000423161 CDK11AQ9UQ88 783 aaPredicted RBP30.31■■■□□ 2.44
SREBF1-206ENST00000423161 ARID4BQ4LE39 1312 aaPredicted RBP30.29■■■□□ 2.44
SREBF1-206ENST00000423161 MADDQ8WXG6 1647 aa30.28■■■□□ 2.44
SREBF1-206ENST00000423161 PTPRMP28827 1452 aa30.27■■■□□ 2.44
SREBF1-206ENST00000423161 TROQ12816 1431 aaPredicted RBP30.27■■■□□ 2.44
SREBF1-206ENST00000423161 PCF11O94913 1555 aaKnown RBP30.27■■■□□ 2.44
SREBF1-206ENST00000423161 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms