RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
CNBP-201ENST00000422453 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
CNBP-201ENST00000422453 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
CNBP-201ENST00000422453 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
CNBP-201ENST00000422453 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
CNBP-201ENST00000422453 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
CNBP-201ENST00000422453 IQGAP2Q13576 1575 aa23.39■■□□□ 1.34
CNBP-201ENST00000422453 CARMIL2Q6F5E8 1435 aa23.37■■□□□ 1.33
CNBP-201ENST00000422453 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
CNBP-201ENST00000422453 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
CNBP-201ENST00000422453 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.33
CNBP-201ENST00000422453 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
CNBP-201ENST00000422453 EEA1Q15075 1411 aa23.31■■□□□ 1.32
CNBP-201ENST00000422453 PTPRGP23470 1445 aa23.3■■□□□ 1.32
CNBP-201ENST00000422453 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
CNBP-201ENST00000422453 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
CNBP-201ENST00000422453 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
CNBP-201ENST00000422453 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
CNBP-201ENST00000422453 CTTNBP2Q8WZ74 1663 aa23.23■■□□□ 1.31
CNBP-201ENST00000422453 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
CNBP-201ENST00000422453 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
CNBP-201ENST00000422453 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
CNBP-201ENST00000422453 KIAA0556O60303 1618 aa23.16■■□□□ 1.3
CNBP-201ENST00000422453 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
CNBP-201ENST00000422453 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
CNBP-201ENST00000422453 ABCC2Q92887 1545 aa23.08■■□□□ 1.28
CNBP-201ENST00000422453 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
CNBP-201ENST00000422453 UHRF1BP1LA0JNW5 1464 aa23.07■■□□□ 1.28
CNBP-201ENST00000422453 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
CNBP-201ENST00000422453 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
CNBP-201ENST00000422453 KIF21BO75037 1637 aa23.02■■□□□ 1.28
CNBP-201ENST00000422453 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
CNBP-201ENST00000422453 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
CNBP-201ENST00000422453 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
CNBP-201ENST00000422453 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
CNBP-201ENST00000422453 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
CNBP-201ENST00000422453 DIP2BQ9P265 1576 aa22.97■■□□□ 1.27
CNBP-201ENST00000422453 ASXL2Q76L83 1435 aa22.97■■□□□ 1.27
CNBP-201ENST00000422453 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
CNBP-201ENST00000422453 SAMD9Q5K651 1589 aa22.92■■□□□ 1.26
CNBP-201ENST00000422453 ABCA8O94911 1581 aa22.9■■□□□ 1.26
CNBP-201ENST00000422453 ZCCHC11Q5TAX3 1644 aaKnown RBP22.9■■□□□ 1.26
CNBP-201ENST00000422453 FHOD3Q2V2M9 1422 aa22.84■■□□□ 1.25
CNBP-201ENST00000422453 ARID3CA6NKF2 412 aa22.83■■□□□ 1.24
CNBP-201ENST00000422453 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
CNBP-201ENST00000422453 TSPOAP1O95153 1857 aa22.82■■□□□ 1.24
CNBP-201ENST00000422453 EPRSP07814 1512 aaKnown RBP22.81■■□□□ 1.24
CNBP-201ENST00000422453 GLI2P10070 1586 aa22.81■■□□□ 1.24
CNBP-201ENST00000422453 WDR7Q9Y4E6 1490 aa22.81■■□□□ 1.24
CNBP-201ENST00000422453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
CNBP-201ENST00000422453 HNRNPUL2Q1KMD3 747 aaKnown RBP22.78■■□□□ 1.24
CNBP-201ENST00000422453 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
CNBP-201ENST00000422453 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
CNBP-201ENST00000422453 ATP10BO94823 1461 aa22.75■■□□□ 1.23
CNBP-201ENST00000422453 KDM6BO15054 1643 aa22.69■■□□□ 1.22
CNBP-201ENST00000422453 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
CNBP-201ENST00000422453 NUP153P49790 1475 aaKnown RBP22.68■■□□□ 1.22
CNBP-201ENST00000422453 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
CNBP-201ENST00000422453 TEX14Q8IWB6 1497 aa22.67■■□□□ 1.22
CNBP-201ENST00000422453 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
CNBP-201ENST00000422453 ATP1B4Q9UN42 357 aaPredicted RBP22.65■■□□□ 1.22
CNBP-201ENST00000422453 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
CNBP-201ENST00000422453 PPRC1Q5VV67 1664 aaKnown RBP22.64■■□□□ 1.22
CNBP-201ENST00000422453 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CNBP-201ENST00000422453 CFAP43Q8NDM7 1665 aa22.61■■□□□ 1.21
CNBP-201ENST00000422453 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
CNBP-201ENST00000422453 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
CNBP-201ENST00000422453 CLIP1P30622 1438 aa22.52■■□□□ 1.2
CNBP-201ENST00000422453 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.2
CNBP-201ENST00000422453 CDK11AQ9UQ88 783 aaPredicted RBP22.52■■□□□ 1.2
CNBP-201ENST00000422453 ABCA9Q8IUA7 1624 aa22.51■■□□□ 1.19
CNBP-201ENST00000422453 COL17A1Q9UMD9 1497 aaPredicted RBP22.49■■□□□ 1.19
CNBP-201ENST00000422453 PHLDB1Q86UU1 1377 aa22.44■■□□□ 1.18
CNBP-201ENST00000422453 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
CNBP-201ENST00000422453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.4■■□□□ 1.184e-8■■□□□ 14.5
CNBP-201ENST00000422453 NEO1Q92859 1461 aa22.39■■□□□ 1.17
CNBP-201ENST00000422453 PCF11O94913 1555 aaKnown RBP22.39■■□□□ 1.17
CNBP-201ENST00000422453 CCDC18Q5T9S5 1454 aa22.38■■□□□ 1.17
CNBP-201ENST00000422453 ARAP3Q8WWN8 1544 aa22.38■■□□□ 1.17
CNBP-201ENST00000422453 FYCO1Q9BQS8 1478 aa22.36■■□□□ 1.17
CNBP-201ENST00000422453 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
CNBP-201ENST00000422453 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
CNBP-201ENST00000422453 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
CNBP-201ENST00000422453 TTC37Q6PGP7 1564 aa22.34■■□□□ 1.17
CNBP-201ENST00000422453 FANCAO15360 1455 aa22.33■■□□□ 1.16
CNBP-201ENST00000422453 LRRIQ1Q96JM4 1722 aa22.32■■□□□ 1.16
CNBP-201ENST00000422453 RAPGEF3O95398 923 aa22.32■■□□□ 1.16
CNBP-201ENST00000422453 KIF14Q15058 1648 aa22.31■■□□□ 1.16
CNBP-201ENST00000422453 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
CNBP-201ENST00000422453 CFAP74Q9C0B2 1584 aa22.3■■□□□ 1.16
CNBP-201ENST00000422453 PLCH2O75038 1416 aa22.28■■□□□ 1.16
CNBP-201ENST00000422453 KDM4FA0A1W2PPD8 638 aa22.26■■□□□ 1.15
CNBP-201ENST00000422453 EFCAB2Q5VUJ9 269 aa22.26■■□□□ 1.15
CNBP-201ENST00000422453 DENND4BO75064 1496 aaPredicted RBP22.25■■□□□ 1.15
CNBP-201ENST00000422453 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
CNBP-201ENST00000422453 ADGRL1O94910 1474 aa22.21■■□□□ 1.15
CNBP-201ENST00000422453 ARHGAP5Q13017 1502 aa22.2■■□□□ 1.14
CNBP-201ENST00000422453 SCAPERQ9BY12 1400 aa22.19■■□□□ 1.14
CNBP-201ENST00000422453 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
CNBP-201ENST00000422453 FRMPD1Q5SYB0 1578 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms