RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 ERCC6L2Q5T890 1561 aa36.09■■■■□ 3.37
FNDC3B-204ENST00000421757 KIAA0586Q9BVV6 1533 aa36.06■■■■□ 3.36
FNDC3B-204ENST00000421757 PRG4Q92954 1404 aaPredicted RBP36.05■■■■□ 3.36
FNDC3B-204ENST00000421757 RAPGEF2Q9Y4G8 1499 aa36.03■■■■□ 3.36
FNDC3B-204ENST00000421757 CHIC1Q5VXU3 224 aa35.92■■■■□ 3.34
FNDC3B-204ENST00000421757 CSRNP3Q8WYN3 585 aa35.84■■■■□ 3.33
FNDC3B-204ENST00000421757 IQGAP2Q13576 1575 aa35.84■■■■□ 3.33
FNDC3B-204ENST00000421757 PRXQ9BXM0 1461 aa35.83■■■■□ 3.33
FNDC3B-204ENST00000421757 EEA1Q15075 1411 aa35.8■■■■□ 3.32
FNDC3B-204ENST00000421757 FAM9AQ8IZU1 332 aaPredicted RBP35.78■■■■□ 3.32
FNDC3B-204ENST00000421757 TRHP20396 242 aaPredicted RBP35.73■■■■□ 3.31
FNDC3B-204ENST00000421757 CARMIL2Q6F5E8 1435 aa35.73■■■■□ 3.31
FNDC3B-204ENST00000421757 TTBK1Q5TCY1 1321 aaPredicted RBP35.67■■■■□ 3.3
FNDC3B-204ENST00000421757 CTTNBP2Q8WZ74 1663 aa35.65■■■■□ 3.3
FNDC3B-204ENST00000421757 UGGT2Q9NYU1 1516 aa35.62■■■■□ 3.29
FNDC3B-204ENST00000421757 PTPRGP23470 1445 aa35.61■■■■□ 3.29
FNDC3B-204ENST00000421757 TNIKQ9UKE5 1360 aa35.61■■■■□ 3.29
FNDC3B-204ENST00000421757 DISP1Q96F81 1524 aa35.58■■■■□ 3.29
FNDC3B-204ENST00000421757 NPM1P06748 294 aaKnown RBP eCLIP35.52■■■■□ 3.28
FNDC3B-204ENST00000421757 KIAA0556O60303 1618 aa35.49■■■■□ 3.27
FNDC3B-204ENST00000421757 ADCY10Q96PN6 1610 aa35.46■■■■□ 3.27
FNDC3B-204ENST00000421757 GOLGA3Q08378 1498 aa35.45■■■■□ 3.27
FNDC3B-204ENST00000421757 KIF21BO75037 1637 aa35.41■■■■□ 3.26
FNDC3B-204ENST00000421757 EHMT2Q96KQ7 1210 aa35.38■■■■□ 3.25
FNDC3B-204ENST00000421757 UACAQ9BZF9 1416 aa35.34■■■■□ 3.25
FNDC3B-204ENST00000421757 RANGAP1P46060 587 aaPredicted RBP35.32■■■■□ 3.24
FNDC3B-204ENST00000421757 P3H3Q8IVL6 736 aa35.3■■■■□ 3.24
FNDC3B-204ENST00000421757 UHRF1BP1LA0JNW5 1464 aa35.28■■■■□ 3.24
FNDC3B-204ENST00000421757 UBTFP17480 764 aaKnown RBP35.27■■■■□ 3.24
FNDC3B-204ENST00000421757 ABCC2Q92887 1545 aa35.27■■■■□ 3.24
FNDC3B-204ENST00000421757 MAPKBP1O60336 1514 aa35.26■■■■□ 3.23
FNDC3B-204ENST00000421757 PLB1Q6P1J6 1458 aa35.19■■■■□ 3.22
FNDC3B-204ENST00000421757 SAMD9Q5K651 1589 aa35.17■■■■□ 3.22
FNDC3B-204ENST00000421757 FAM69CQ0P6D2 419 aa35.16■■■■□ 3.22
FNDC3B-204ENST00000421757 ABCC10Q5T3U5 1492 aa35.15■■■■□ 3.22
FNDC3B-204ENST00000421757 KDM5BQ9UGL1 1544 aa35.11■■■■□ 3.21
FNDC3B-204ENST00000421757 KIF13AQ9H1H9 1805 aa35.11■■■■□ 3.21
FNDC3B-204ENST00000421757 ABCA8O94911 1581 aa35.09■■■■□ 3.21
FNDC3B-204ENST00000421757 ASXL2Q76L83 1435 aa35.08■■■■□ 3.21
FNDC3B-204ENST00000421757 DIP2BQ9P265 1576 aa35.07■■■■□ 3.2
FNDC3B-204ENST00000421757 ZCCHC11Q5TAX3 1644 aaKnown RBP35.05■■■■□ 3.2
FNDC3B-204ENST00000421757 FHOD3Q2V2M9 1422 aa35.05■■■■□ 3.2
FNDC3B-204ENST00000421757 EFCAB5A4FU69 1503 aa35.02■■■■□ 3.2
FNDC3B-204ENST00000421757 ARID3CA6NKF2 412 aa34.96■■■■□ 3.19
FNDC3B-204ENST00000421757 RAPGEF6Q8TEU7 1601 aa34.9■■■■□ 3.18
FNDC3B-204ENST00000421757 WDR7Q9Y4E6 1490 aa34.87■■■■□ 3.17
FNDC3B-204ENST00000421757 EPRSP07814 1512 aaKnown RBP34.86■■■■□ 3.17
FNDC3B-204ENST00000421757 ARHGAP35Q9NRY4 1499 aa34.84■■■■□ 3.17
FNDC3B-204ENST00000421757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.84■■■■□ 3.17
FNDC3B-204ENST00000421757 HNRNPUL2Q1KMD3 747 aaKnown RBP34.84■■■■□ 3.17
FNDC3B-204ENST00000421757 ATP10BO94823 1461 aa34.84■■■■□ 3.17
FNDC3B-204ENST00000421757 GLI2P10070 1586 aa34.83■■■■□ 3.17
FNDC3B-204ENST00000421757 KCNH8Q96L42 1107 aa34.81■■■■□ 3.16
FNDC3B-204ENST00000421757 TSPOAP1O95153 1857 aa34.81■■■■□ 3.16
FNDC3B-204ENST00000421757 NUP153P49790 1475 aaKnown RBP34.78■■■■□ 3.16
FNDC3B-204ENST00000421757 FMN1Q68DA7 1419 aa34.74■■■■□ 3.15
FNDC3B-204ENST00000421757 ATP1B4Q9UN42 357 aaPredicted RBP34.71■■■■□ 3.15
FNDC3B-204ENST00000421757 MAP3K4Q9Y6R4 1608 aa34.66■■■■□ 3.14
FNDC3B-204ENST00000421757 CLIP1P30622 1438 aa34.63■■■■□ 3.13
FNDC3B-204ENST00000421757 PPRC1Q5VV67 1664 aaKnown RBP34.6■■■■□ 3.13
FNDC3B-204ENST00000421757 PLEKHD1A6NEE1 506 aa34.6■■■■□ 3.13
FNDC3B-204ENST00000421757 CD109Q6YHK3 1445 aa34.6■■■■□ 3.13
FNDC3B-204ENST00000421757 KDM6BO15054 1643 aa34.58■■■■□ 3.13
FNDC3B-204ENST00000421757 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
FNDC3B-204ENST00000421757 HECW1Q76N89 1606 aa34.57■■■■□ 3.12
FNDC3B-204ENST00000421757 CFAP43Q8NDM7 1665 aa34.56■■■■□ 3.12
FNDC3B-204ENST00000421757 CDK13Q14004 1512 aaKnown RBP34.55■■■■□ 3.12
FNDC3B-204ENST00000421757 LOC105371045A0A1W2PR82 267 aa34.5■■■■□ 3.11
FNDC3B-204ENST00000421757 MAGI3Q5TCQ9 1506 aa34.48■■■■□ 3.11
FNDC3B-204ENST00000421757 ABCA9Q8IUA7 1624 aa34.44■■■■□ 3.1
FNDC3B-204ENST00000421757 CDK11AQ9UQ88 783 aaPredicted RBP34.44■■■■□ 3.1
FNDC3B-204ENST00000421757 CEP162Q5TB80 1403 aa34.43■■■■□ 3.1
FNDC3B-204ENST00000421757 CASKIN1Q8WXD9 1431 aa34.43■■■■□ 3.1
FNDC3B-204ENST00000421757 PCF11O94913 1555 aaKnown RBP34.42■■■■□ 3.1
FNDC3B-204ENST00000421757 COL17A1Q9UMD9 1497 aaPredicted RBP34.35■■■■□ 3.09
FNDC3B-204ENST00000421757 FYCO1Q9BQS8 1478 aa34.33■■■■□ 3.09
FNDC3B-204ENST00000421757 LRRIQ1Q96JM4 1722 aa34.32■■■■□ 3.08
FNDC3B-204ENST00000421757 CCDC18Q5T9S5 1454 aa34.32■■■■□ 3.08
FNDC3B-204ENST00000421757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.3■■■■□ 3.081e-14■□□□□ 11
FNDC3B-204ENST00000421757 TROQ12816 1431 aaPredicted RBP34.26■■■■□ 3.07
FNDC3B-204ENST00000421757 TTC37Q6PGP7 1564 aa34.25■■■■□ 3.07
FNDC3B-204ENST00000421757 PHLDB1Q86UU1 1377 aa34.23■■■■□ 3.07
FNDC3B-204ENST00000421757 NEO1Q92859 1461 aa34.21■■■■□ 3.07
FNDC3B-204ENST00000421757 KIF14Q15058 1648 aa34.19■■■■□ 3.06
FNDC3B-204ENST00000421757 ARAP3Q8WWN8 1544 aa34.18■■■■□ 3.06
FNDC3B-204ENST00000421757 FANCAO15360 1455 aa34.15■■■■□ 3.06
FNDC3B-204ENST00000421757 PLCH2O75038 1416 aa34.12■■■■□ 3.05
FNDC3B-204ENST00000421757 AKNAQ7Z591 1439 aa34.1■■■■□ 3.05
FNDC3B-204ENST00000421757 CFAP74Q9C0B2 1584 aa34.1■■■■□ 3.05
FNDC3B-204ENST00000421757 RAPGEF3O95398 923 aa34.09■■■■□ 3.05
FNDC3B-204ENST00000421757 MYO5CQ9NQX4 1742 aa34.06■■■■□ 3.04
FNDC3B-204ENST00000421757 EFCAB2Q5VUJ9 269 aa34.04■■■■□ 3.04
FNDC3B-204ENST00000421757 AEBP2Q6ZN18 517 aaPredicted RBP34.04■■■■□ 3.04
FNDC3B-204ENST00000421757 MTUS2Q5JR59 1369 aa34.01■■■■□ 3.04
FNDC3B-204ENST00000421757 VPS8Q8N3P4 1428 aa34.01■■■■□ 3.03
FNDC3B-204ENST00000421757 DENND4BO75064 1496 aaPredicted RBP34.01■■■■□ 3.03
FNDC3B-204ENST00000421757 ARHGAP5Q13017 1502 aa33.99■■■■□ 3.03
FNDC3B-204ENST00000421757 ADGRL1O94910 1474 aa33.97■■■■□ 3.03
FNDC3B-204ENST00000421757 SCAPERQ9BY12 1400 aa33.94■■■■□ 3.02
FNDC3B-204ENST00000421757 FRMPD1Q5SYB0 1578 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms