RNA–Protein interactions for RNA: ENST00000421516.1

MYD88-204, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MYD88, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-204ENST00000421516 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
MYD88-204ENST00000421516 ARHGAP35Q9NRY4 1499 aa20.39■□□□□ 0.85
MYD88-204ENST00000421516 P3H3Q8IVL6 736 aa20.39■□□□□ 0.85
MYD88-204ENST00000421516 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
MYD88-204ENST00000421516 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.851e-6■■■■■ 35.7
MYD88-204ENST00000421516 KANK4Q5T7N3 995 aaPredicted RBP20.35■□□□□ 0.85
MYD88-204ENST00000421516 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
MYD88-204ENST00000421516 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
MYD88-204ENST00000421516 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
MYD88-204ENST00000421516 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
MYD88-204ENST00000421516 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.83
MYD88-204ENST00000421516 EIF4G3O43432 1585 aaKnown RBP20.26■□□□□ 0.83
MYD88-204ENST00000421516 ITGAEP38570 1179 aa20.24■□□□□ 0.83
MYD88-204ENST00000421516 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
MYD88-204ENST00000421516 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
MYD88-204ENST00000421516 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
MYD88-204ENST00000421516 SAMD9Q5K651 1589 aa20.13■□□□□ 0.81
MYD88-204ENST00000421516 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
MYD88-204ENST00000421516 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
MYD88-204ENST00000421516 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
MYD88-204ENST00000421516 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
MYD88-204ENST00000421516 TIAM1Q13009 1591 aa20.07■□□□□ 0.8
MYD88-204ENST00000421516 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
MYD88-204ENST00000421516 FMN1Q68DA7 1419 aa20.04■□□□□ 0.8
MYD88-204ENST00000421516 FYCO1Q9BQS8 1478 aa20.04■□□□□ 0.8
MYD88-204ENST00000421516 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
MYD88-204ENST00000421516 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
MYD88-204ENST00000421516 CASKIN1Q8WXD9 1431 aa20.03■□□□□ 0.8
MYD88-204ENST00000421516 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
MYD88-204ENST00000421516 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
MYD88-204ENST00000421516 UGGT2Q9NYU1 1516 aa19.98■□□□□ 0.79
MYD88-204ENST00000421516 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
MYD88-204ENST00000421516 ARID3CA6NKF2 412 aa19.96■□□□□ 0.79
MYD88-204ENST00000421516 FAM50AQ14320 339 aaKnown RBP19.96■□□□□ 0.79
MYD88-204ENST00000421516 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
MYD88-204ENST00000421516 FBLN2P98095 1184 aa19.94■□□□□ 0.78
MYD88-204ENST00000421516 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
MYD88-204ENST00000421516 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
MYD88-204ENST00000421516 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
MYD88-204ENST00000421516 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.78
MYD88-204ENST00000421516 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.78
MYD88-204ENST00000421516 KIAA0556O60303 1618 aa19.89■□□□□ 0.77
MYD88-204ENST00000421516 NUP160Q12769 1436 aa19.89■□□□□ 0.77
MYD88-204ENST00000421516 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
MYD88-204ENST00000421516 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
MYD88-204ENST00000421516 CHD1O14646 1710 aa19.82■□□□□ 0.76
MYD88-204ENST00000421516 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
MYD88-204ENST00000421516 CCDC18Q5T9S5 1454 aa19.8■□□□□ 0.76
MYD88-204ENST00000421516 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
MYD88-204ENST00000421516 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
MYD88-204ENST00000421516 JPH4Q96JJ6 628 aa19.77■□□□□ 0.75
MYD88-204ENST00000421516 EPRSP07814 1512 aaKnown RBP19.75■□□□□ 0.75
MYD88-204ENST00000421516 EHBP1L1Q8N3D4 1523 aa19.75■□□□□ 0.75
MYD88-204ENST00000421516 CARMIL2Q6F5E8 1435 aa19.75■□□□□ 0.75
MYD88-204ENST00000421516 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
MYD88-204ENST00000421516 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
MYD88-204ENST00000421516 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
MYD88-204ENST00000421516 SUPT6HQ7KZ85 1726 aaKnown RBP19.73■□□□□ 0.75
MYD88-204ENST00000421516 CDK13Q14004 1512 aaKnown RBP19.71■□□□□ 0.75
MYD88-204ENST00000421516 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
MYD88-204ENST00000421516 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
MYD88-204ENST00000421516 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
MYD88-204ENST00000421516 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
MYD88-204ENST00000421516 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
MYD88-204ENST00000421516 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
MYD88-204ENST00000421516 PLB1Q6P1J6 1458 aa19.63■□□□□ 0.73
MYD88-204ENST00000421516 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
MYD88-204ENST00000421516 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
MYD88-204ENST00000421516 SIN3AQ96ST3 1273 aa19.62■□□□□ 0.73
MYD88-204ENST00000421516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.61■□□□□ 0.73
MYD88-204ENST00000421516 MYOM3Q5VTT5 1437 aa19.61■□□□□ 0.73
MYD88-204ENST00000421516 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
MYD88-204ENST00000421516 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
MYD88-204ENST00000421516 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
MYD88-204ENST00000421516 ABCA8O94911 1581 aa19.58■□□□□ 0.73
MYD88-204ENST00000421516 MIER1Q8N108 512 aa19.58■□□□□ 0.72
MYD88-204ENST00000421516 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
MYD88-204ENST00000421516 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
MYD88-204ENST00000421516 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
MYD88-204ENST00000421516 PTPRGP23470 1445 aa19.53■□□□□ 0.72
MYD88-204ENST00000421516 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
MYD88-204ENST00000421516 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.72
MYD88-204ENST00000421516 PTPRKQ15262 1439 aa19.52■□□□□ 0.71
MYD88-204ENST00000421516 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
MYD88-204ENST00000421516 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
MYD88-204ENST00000421516 TROQ12816 1431 aaPredicted RBP19.49■□□□□ 0.71
MYD88-204ENST00000421516 ERCC6L2Q5T890 1561 aa19.49■□□□□ 0.71
MYD88-204ENST00000421516 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
MYD88-204ENST00000421516 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
MYD88-204ENST00000421516 HIRIP3Q9BW71 556 aaPredicted RBP19.47■□□□□ 0.71
MYD88-204ENST00000421516 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
MYD88-204ENST00000421516 ATP10BO94823 1461 aa19.46■□□□□ 0.71
MYD88-204ENST00000421516 KIF14Q15058 1648 aa19.43■□□□□ 0.7
MYD88-204ENST00000421516 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
MYD88-204ENST00000421516 ITSN2Q9NZM3 1697 aa19.41■□□□□ 0.7
MYD88-204ENST00000421516 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
MYD88-204ENST00000421516 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
MYD88-204ENST00000421516 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
MYD88-204ENST00000421516 TRIM52Q96A61 297 aa19.38■□□□□ 0.69
MYD88-204ENST00000421516 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms