RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
VARS2-202ENST00000421263 CUL7Q14999 1698 aa32.9■■■□□ 2.86
VARS2-202ENST00000421263 KIAA0586Q9BVV6 1533 aa32.88■■■□□ 2.85
VARS2-202ENST00000421263 CARMIL1Q5VZK9 1371 aa32.81■■■□□ 2.84
VARS2-202ENST00000421263 NPM1P06748 294 aaKnown RBP eCLIP32.63■■■□□ 2.81
VARS2-202ENST00000421263 KIF13AQ9H1H9 1805 aa32.61■■■□□ 2.81
VARS2-202ENST00000421263 ADCY10Q96PN6 1610 aa32.6■■■□□ 2.81
VARS2-202ENST00000421263 MAPKBP1O60336 1514 aa32.57■■■□□ 2.8
VARS2-202ENST00000421263 ABCC10Q5T3U5 1492 aa32.54■■■□□ 2.8
VARS2-202ENST00000421263 PTPRGP23470 1445 aa32.54■■■□□ 2.8
VARS2-202ENST00000421263 CARMIL2Q6F5E8 1435 aa32.52■■■□□ 2.8
VARS2-202ENST00000421263 IQGAP2Q13576 1575 aa32.52■■■□□ 2.8
VARS2-202ENST00000421263 RAPGEF2Q9Y4G8 1499 aa32.51■■■□□ 2.79
VARS2-202ENST00000421263 TNIKQ9UKE5 1360 aa32.5■■■□□ 2.79
VARS2-202ENST00000421263 FAM69CQ0P6D2 419 aa32.5■■■□□ 2.79
VARS2-202ENST00000421263 DIP2BQ9P265 1576 aa32.42■■■□□ 2.78
VARS2-202ENST00000421263 DISP1Q96F81 1524 aa32.41■■■□□ 2.78
VARS2-202ENST00000421263 TTBK1Q5TCY1 1321 aaPredicted RBP32.37■■■□□ 2.77
VARS2-202ENST00000421263 UGGT2Q9NYU1 1516 aa32.36■■■□□ 2.77
VARS2-202ENST00000421263 ABCC2Q92887 1545 aa32.34■■■□□ 2.77
VARS2-202ENST00000421263 UHRF1BP1LA0JNW5 1464 aa32.33■■■□□ 2.77
VARS2-202ENST00000421263 UACAQ9BZF9 1416 aa32.29■■■□□ 2.76
VARS2-202ENST00000421263 AEBP2Q6ZN18 517 aaPredicted RBP32.25■■■□□ 2.75
VARS2-202ENST00000421263 PRXQ9BXM0 1461 aa32.23■■■□□ 2.75
VARS2-202ENST00000421263 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
VARS2-202ENST00000421263 PLB1Q6P1J6 1458 aa32.21■■■□□ 2.75
VARS2-202ENST00000421263 ASXL2Q76L83 1435 aa32.2■■■□□ 2.75
VARS2-202ENST00000421263 KDM5BQ9UGL1 1544 aa32.17■■■□□ 2.74
VARS2-202ENST00000421263 CTTNBP2Q8WZ74 1663 aa32.17■■■□□ 2.74
VARS2-202ENST00000421263 GLI2P10070 1586 aa32.14■■■□□ 2.74
VARS2-202ENST00000421263 TSPOAP1O95153 1857 aa32.14■■■□□ 2.74
VARS2-202ENST00000421263 GOLGA3Q08378 1498 aa32.1■■■□□ 2.73
VARS2-202ENST00000421263 KDM6BO15054 1643 aa32.08■■■□□ 2.73
VARS2-202ENST00000421263 ZCCHC11Q5TAX3 1644 aaKnown RBP32.04■■■□□ 2.72
VARS2-202ENST00000421263 CSRNP3Q8WYN3 585 aa32.03■■■□□ 2.72
VARS2-202ENST00000421263 EPRSP07814 1512 aaKnown RBP32.03■■■□□ 2.72
VARS2-202ENST00000421263 PPRC1Q5VV67 1664 aaKnown RBP32.01■■■□□ 2.71
VARS2-202ENST00000421263 ABCA8O94911 1581 aa31.96■■■□□ 2.71
VARS2-202ENST00000421263 MAP3K4Q9Y6R4 1608 aa31.93■■■□□ 2.7
VARS2-202ENST00000421263 WDR7Q9Y4E6 1490 aa31.9■■■□□ 2.7
VARS2-202ENST00000421263 EEA1Q15075 1411 aa31.88■■■□□ 2.69
VARS2-202ENST00000421263 COL17A1Q9UMD9 1497 aaPredicted RBP31.84■■■□□ 2.69
VARS2-202ENST00000421263 TEX14Q8IWB6 1497 aa31.83■■■□□ 2.69
VARS2-202ENST00000421263 P3H3Q8IVL6 736 aa31.82■■■□□ 2.68
VARS2-202ENST00000421263 KDM4FA0A1W2PPD8 638 aa31.81■■■□□ 2.68
VARS2-202ENST00000421263 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
VARS2-202ENST00000421263 SAMD9Q5K651 1589 aa31.77■■■□□ 2.68
VARS2-202ENST00000421263 KCNH8Q96L42 1107 aa31.75■■■□□ 2.67
VARS2-202ENST00000421263 ATP10BO94823 1461 aa31.72■■■□□ 2.67
VARS2-202ENST00000421263 CD109Q6YHK3 1445 aa31.72■■■□□ 2.67
VARS2-202ENST00000421263 MAGI3Q5TCQ9 1506 aa31.71■■■□□ 2.67
VARS2-202ENST00000421263 CFAP43Q8NDM7 1665 aa31.7■■■□□ 2.66
VARS2-202ENST00000421263 ARID3CA6NKF2 412 aa31.63■■■□□ 2.65
VARS2-202ENST00000421263 RAPGEF6Q8TEU7 1601 aa31.6■■■□□ 2.65
VARS2-202ENST00000421263 KIF21BO75037 1637 aa31.59■■■□□ 2.65
VARS2-202ENST00000421263 RANGAP1P46060 587 aaPredicted RBP31.55■■■□□ 2.64
VARS2-202ENST00000421263 CHIC1Q5VXU3 224 aa31.54■■■□□ 2.64
VARS2-202ENST00000421263 FHOD3Q2V2M9 1422 aa31.54■■■□□ 2.64
VARS2-202ENST00000421263 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
VARS2-202ENST00000421263 ABCA9Q8IUA7 1624 aa31.5■■■□□ 2.63
VARS2-202ENST00000421263 ADGRL1O94910 1474 aa31.5■■■□□ 2.63
VARS2-202ENST00000421263 ARAP3Q8WWN8 1544 aa31.47■■■□□ 2.63
VARS2-202ENST00000421263 EFCAB5A4FU69 1503 aa31.46■■■□□ 2.63
VARS2-202ENST00000421263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.46■■■□□ 2.63
VARS2-202ENST00000421263 HNRNPUL2Q1KMD3 747 aaKnown RBP31.46■■■□□ 2.63
VARS2-202ENST00000421263 PHLDB1Q86UU1 1377 aa31.44■■■□□ 2.62
VARS2-202ENST00000421263 PLEKHD1A6NEE1 506 aa31.37■■■□□ 2.61
VARS2-202ENST00000421263 UBTFP17480 764 aaKnown RBP31.35■■■□□ 2.61
VARS2-202ENST00000421263 NEO1Q92859 1461 aa31.34■■■□□ 2.61
VARS2-202ENST00000421263 EHMT2Q96KQ7 1210 aa31.28■■■□□ 2.6
VARS2-202ENST00000421263 RAPGEF3O95398 923 aa31.26■■■□□ 2.59
VARS2-202ENST00000421263 ARHGAP35Q9NRY4 1499 aa31.23■■■□□ 2.59
VARS2-202ENST00000421263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.21■■■□□ 2.59
VARS2-202ENST00000421263 FMN1Q68DA7 1419 aa31.21■■■□□ 2.59
VARS2-202ENST00000421263 CDK13Q14004 1512 aaKnown RBP31.18■■■□□ 2.58
VARS2-202ENST00000421263 FRMPD1Q5SYB0 1578 aa31.16■■■□□ 2.58
VARS2-202ENST00000421263 AKNAQ7Z591 1439 aa31.15■■■□□ 2.58
VARS2-202ENST00000421263 FANCAO15360 1455 aa31.13■■■□□ 2.57
VARS2-202ENST00000421263 TTC37Q6PGP7 1564 aa31.12■■■□□ 2.57
VARS2-202ENST00000421263 DENND4BO75064 1496 aaPredicted RBP31.1■■■□□ 2.57
VARS2-202ENST00000421263 HECW1Q76N89 1606 aa31.09■■■□□ 2.57
VARS2-202ENST00000421263 ATP1B4Q9UN42 357 aaPredicted RBP31.08■■■□□ 2.57
VARS2-202ENST00000421263 CFAP74Q9C0B2 1584 aa31.08■■■□□ 2.57
VARS2-202ENST00000421263 RICTORQ6R327 1708 aa31.06■■■□□ 2.56
VARS2-202ENST00000421263 PLCH2O75038 1416 aa31.06■■■□□ 2.56
VARS2-202ENST00000421263 CDK11AQ9UQ88 783 aaPredicted RBP31.04■■■□□ 2.56
VARS2-202ENST00000421263 ADAMTSL3P82987 1691 aa31.03■■■□□ 2.56
VARS2-202ENST00000421263 HECW2Q9P2P5 1572 aa31.02■■■□□ 2.56
VARS2-202ENST00000421263 ZMYM4Q5VZL5 1548 aa30.96■■■□□ 2.55
VARS2-202ENST00000421263 ARHGEF40Q8TER5 1519 aa30.96■■■□□ 2.55
VARS2-202ENST00000421263 TROQ12816 1431 aaPredicted RBP30.95■■■□□ 2.54
VARS2-202ENST00000421263 BCORL1Q5H9F3 1711 aa30.95■■■□□ 2.54
VARS2-202ENST00000421263 PTPRMP28827 1452 aa30.94■■■□□ 2.54
VARS2-202ENST00000421263 LRRIQ1Q96JM4 1722 aa30.93■■■□□ 2.54
VARS2-202ENST00000421263 SCAPERQ9BY12 1400 aa30.93■■■□□ 2.54
VARS2-202ENST00000421263 EFCAB2Q5VUJ9 269 aa30.93■■■□□ 2.54
VARS2-202ENST00000421263 ARID4BQ4LE39 1312 aaPredicted RBP30.93■■■□□ 2.54
VARS2-202ENST00000421263 MAGI2Q86UL8 1455 aa30.92■■■□□ 2.54
VARS2-202ENST00000421263 KIF14Q15058 1648 aa30.91■■■□□ 2.54
VARS2-202ENST00000421263 CASKIN1Q8WXD9 1431 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms