RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 PRXQ9BXM0 1461 aa31.02■■■□□ 2.56
DDR1-233ENST00000421124 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
DDR1-233ENST00000421124 KIAA0586Q9BVV6 1533 aa31■■■□□ 2.55
DDR1-233ENST00000421124 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
DDR1-233ENST00000421124 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
DDR1-233ENST00000421124 JPH4Q96JJ6 628 aa30.9■■■□□ 2.54
DDR1-233ENST00000421124 IQGAP2Q13576 1575 aa30.9■■■□□ 2.54
DDR1-233ENST00000421124 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
DDR1-233ENST00000421124 ERCC6L2Q5T890 1561 aa30.89■■■□□ 2.54
DDR1-233ENST00000421124 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
DDR1-233ENST00000421124 KIF21BO75037 1637 aa30.83■■■□□ 2.53
DDR1-233ENST00000421124 CYB5RLQ6IPT4 315 aa30.8■■■□□ 2.52
DDR1-233ENST00000421124 UGGT2Q9NYU1 1516 aa30.71■■■□□ 2.51
DDR1-233ENST00000421124 CARMIL2Q6F5E8 1435 aa30.67■■■□□ 2.5
DDR1-233ENST00000421124 GOLGA3Q08378 1498 aa30.63■■■□□ 2.49
DDR1-233ENST00000421124 DISP1Q96F81 1524 aa30.63■■■□□ 2.49
DDR1-233ENST00000421124 KIAA0556O60303 1618 aa30.59■■■□□ 2.49
DDR1-233ENST00000421124 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
DDR1-233ENST00000421124 EHMT2Q96KQ7 1210 aa30.54■■■□□ 2.48
DDR1-233ENST00000421124 PTPRGP23470 1445 aa30.5■■■□□ 2.47
DDR1-233ENST00000421124 UBTFP17480 764 aaKnown RBP30.5■■■□□ 2.47
DDR1-233ENST00000421124 SAMD9Q5K651 1589 aa30.45■■■□□ 2.46
DDR1-233ENST00000421124 TTBK1Q5TCY1 1321 aaPredicted RBP30.44■■■□□ 2.46
DDR1-233ENST00000421124 ADCY10Q96PN6 1610 aa30.4■■■□□ 2.46
DDR1-233ENST00000421124 RANGAP1P46060 587 aaPredicted RBP30.36■■■□□ 2.45
DDR1-233ENST00000421124 EFCAB5A4FU69 1503 aa30.35■■■□□ 2.45
DDR1-233ENST00000421124 P3H3Q8IVL6 736 aa30.33■■■□□ 2.45
DDR1-233ENST00000421124 UACAQ9BZF9 1416 aa30.31■■■□□ 2.44
DDR1-233ENST00000421124 UHRF1BP1LA0JNW5 1464 aa30.29■■■□□ 2.44
DDR1-233ENST00000421124 ABCC2Q92887 1545 aa30.28■■■□□ 2.44
DDR1-233ENST00000421124 NPM1P06748 294 aaKnown RBP eCLIP30.25■■■□□ 2.43
DDR1-233ENST00000421124 FHOD3Q2V2M9 1422 aa30.24■■■□□ 2.43
DDR1-233ENST00000421124 PLB1Q6P1J6 1458 aa30.24■■■□□ 2.43
DDR1-233ENST00000421124 ABCA8O94911 1581 aa30.24■■■□□ 2.43
DDR1-233ENST00000421124 ARHGAP35Q9NRY4 1499 aa30.19■■■□□ 2.42
DDR1-233ENST00000421124 MAPKBP1O60336 1514 aa30.17■■■□□ 2.42
DDR1-233ENST00000421124 KDM5BQ9UGL1 1544 aa30.15■■■□□ 2.42
DDR1-233ENST00000421124 ZCCHC11Q5TAX3 1644 aaKnown RBP30.14■■■□□ 2.41
DDR1-233ENST00000421124 RAPGEF6Q8TEU7 1601 aa30.14■■■□□ 2.41
DDR1-233ENST00000421124 TRHP20396 242 aaPredicted RBP30.12■■■□□ 2.41
DDR1-233ENST00000421124 CLIP1P30622 1438 aa30.06■■■□□ 2.4
DDR1-233ENST00000421124 LOC105371045A0A1W2PR82 267 aa30.06■■■□□ 2.4
DDR1-233ENST00000421124 FMN1Q68DA7 1419 aa30.04■■■□□ 2.4
DDR1-233ENST00000421124 KIF13AQ9H1H9 1805 aa30.03■■■□□ 2.4
DDR1-233ENST00000421124 ASXL2Q76L83 1435 aa30.01■■■□□ 2.39
DDR1-233ENST00000421124 ABCC10Q5T3U5 1492 aa29.99■■■□□ 2.39
DDR1-233ENST00000421124 NUP153P49790 1475 aaKnown RBP29.98■■■□□ 2.39
DDR1-233ENST00000421124 DIP2BQ9P265 1576 aa29.98■■■□□ 2.39
DDR1-233ENST00000421124 CEP162Q5TB80 1403 aa29.97■■■□□ 2.39
DDR1-233ENST00000421124 ATP10BO94823 1461 aa29.96■■■□□ 2.39
DDR1-233ENST00000421124 ARID3CA6NKF2 412 aa29.93■■■□□ 2.38
DDR1-233ENST00000421124 HECW1Q76N89 1606 aa29.92■■■□□ 2.38
DDR1-233ENST00000421124 WDR7Q9Y4E6 1490 aa29.9■■■□□ 2.38
DDR1-233ENST00000421124 FAM69CQ0P6D2 419 aa29.88■■■□□ 2.37
DDR1-233ENST00000421124 PCF11O94913 1555 aaKnown RBP29.86■■■□□ 2.37
DDR1-233ENST00000421124 EPRSP07814 1512 aaKnown RBP29.84■■■□□ 2.37
DDR1-233ENST00000421124 GLI2P10070 1586 aa29.84■■■□□ 2.37
DDR1-233ENST00000421124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.83■■■□□ 2.37
DDR1-233ENST00000421124 HNRNPUL2Q1KMD3 747 aaKnown RBP29.83■■■□□ 2.37
DDR1-233ENST00000421124 ATP1B4Q9UN42 357 aaPredicted RBP29.82■■■□□ 2.36
DDR1-233ENST00000421124 CASKIN1Q8WXD9 1431 aa29.81■■■□□ 2.36
DDR1-233ENST00000421124 LRRIQ1Q96JM4 1722 aa29.81■■■□□ 2.36
DDR1-233ENST00000421124 CDK13Q14004 1512 aaKnown RBP29.81■■■□□ 2.36
DDR1-233ENST00000421124 FYCO1Q9BQS8 1478 aa29.78■■■□□ 2.36
DDR1-233ENST00000421124 TSPOAP1O95153 1857 aa29.77■■■□□ 2.36
DDR1-233ENST00000421124 MAP3K4Q9Y6R4 1608 aa29.74■■■□□ 2.35
DDR1-233ENST00000421124 KCNH8Q96L42 1107 aa29.73■■■□□ 2.35
DDR1-233ENST00000421124 PLEKHD1A6NEE1 506 aa29.71■■■□□ 2.35
DDR1-233ENST00000421124 CCDC18Q5T9S5 1454 aa29.71■■■□□ 2.35
DDR1-233ENST00000421124 CFAP43Q8NDM7 1665 aa29.7■■■□□ 2.35
DDR1-233ENST00000421124 PPRC1Q5VV67 1664 aaKnown RBP29.66■■■□□ 2.34
DDR1-233ENST00000421124 ABCA9Q8IUA7 1624 aa29.64■■■□□ 2.34
DDR1-233ENST00000421124 CDK11AQ9UQ88 783 aaPredicted RBP29.63■■■□□ 2.33
DDR1-233ENST00000421124 VPS8Q8N3P4 1428 aa29.61■■■□□ 2.33
DDR1-233ENST00000421124 CD109Q6YHK3 1445 aa29.59■■■□□ 2.33
DDR1-233ENST00000421124 TROQ12816 1431 aaPredicted RBP29.56■■■□□ 2.32
DDR1-233ENST00000421124 TEX14Q8IWB6 1497 aa29.55■■■□□ 2.32
DDR1-233ENST00000421124 MAGI3Q5TCQ9 1506 aa29.54■■■□□ 2.32
DDR1-233ENST00000421124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.53■■■□□ 2.329e-7■■■□□ 17.5
DDR1-233ENST00000421124 KIF14Q15058 1648 aa29.53■■■□□ 2.32
DDR1-233ENST00000421124 TTC37Q6PGP7 1564 aa29.51■■■□□ 2.31
DDR1-233ENST00000421124 KDM6BO15054 1643 aa29.46■■■□□ 2.31
DDR1-233ENST00000421124 MYO5CQ9NQX4 1742 aa29.42■■■□□ 2.3
DDR1-233ENST00000421124 TIAM1Q13009 1591 aa29.42■■■□□ 2.3
DDR1-233ENST00000421124 AEBP2Q6ZN18 517 aaPredicted RBP29.4■■■□□ 2.3
DDR1-233ENST00000421124 MTUS2Q5JR59 1369 aa29.39■■■□□ 2.3
DDR1-233ENST00000421124 EHBP1L1Q8N3D4 1523 aa29.38■■■□□ 2.29
DDR1-233ENST00000421124 CFAP74Q9C0B2 1584 aa29.37■■■□□ 2.29
DDR1-233ENST00000421124 NEO1Q92859 1461 aa29.35■■■□□ 2.29
DDR1-233ENST00000421124 MAP3K1Q13233 1512 aa29.35■■■□□ 2.29
DDR1-233ENST00000421124 PLCH2O75038 1416 aa29.34■■■□□ 2.29
DDR1-233ENST00000421124 ARAP3Q8WWN8 1544 aa29.32■■■□□ 2.28
DDR1-233ENST00000421124 PHLDB1Q86UU1 1377 aa29.32■■■□□ 2.28
DDR1-233ENST00000421124 FANCAO15360 1455 aa29.31■■■□□ 2.28
DDR1-233ENST00000421124 COL17A1Q9UMD9 1497 aaPredicted RBP29.3■■■□□ 2.28
DDR1-233ENST00000421124 CDC42BPAQ5VT25 1732 aa29.3■■■□□ 2.28
DDR1-233ENST00000421124 CDC42BPBQ9Y5S2 1711 aa29.29■■■□□ 2.28
DDR1-233ENST00000421124 PREX2Q70Z35 1606 aa29.29■■■□□ 2.28
DDR1-233ENST00000421124 SUPT6HQ7KZ85 1726 aaKnown RBP29.26■■■□□ 2.27
DDR1-233ENST00000421124 LRRC9Q6ZRR7 1453 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms