RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 CNGB1Q14028 1251 aaPredicted RBP8.55□□□□□ -1.04
SBNO1-202ENST00000420886 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
SBNO1-202ENST00000420886 TONSLQ96HA7 1378 aa8.53□□□□□ -1.04
SBNO1-202ENST00000420886 FAM9BQ8IZU0 186 aa8.51□□□□□ -1.05
SBNO1-202ENST00000420886 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
SBNO1-202ENST00000420886 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
SBNO1-202ENST00000420886 GOLGA6L22H0YM25 854 aa8.5□□□□□ -1.05
SBNO1-202ENST00000420886 SALL2Q9Y467 1007 aaPredicted RBP8.5□□□□□ -1.05
SBNO1-202ENST00000420886 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.5□□□□□ -1.05
SBNO1-202ENST00000420886 CCER2I3L3R5 266 aa8.49□□□□□ -1.05
SBNO1-202ENST00000420886 GSE1Q14687 1217 aa8.49□□□□□ -1.05
SBNO1-202ENST00000420886 EEA1Q15075 1411 aa8.48□□□□□ -1.05
SBNO1-202ENST00000420886 DNTTIP2Q5QJE6 756 aaKnown RBP8.47□□□□□ -1.05
SBNO1-202ENST00000420886 ZCCHC6Q5VYS8 1495 aaKnown RBP8.47□□□□□ -1.05
SBNO1-202ENST00000420886 MRS2Q9HD23 443 aa8.46□□□□□ -1.05
SBNO1-202ENST00000420886 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
SBNO1-202ENST00000420886 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
SBNO1-202ENST00000420886 CHAF1AQ13111 956 aaPredicted RBP8.44□□□□□ -1.06
SBNO1-202ENST00000420886 PTMSP20962 102 aa8.43□□□□□ -1.06
SBNO1-202ENST00000420886 A0A0U1RQG5 324 aaPredicted RBP8.43□□□□□ -1.06
SBNO1-202ENST00000420886 CEP162Q5TB80 1403 aa8.42□□□□□ -1.06
SBNO1-202ENST00000420886 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
SBNO1-202ENST00000420886 RRP9O43818 475 aaKnown RBP8.42□□□□□ -1.06
SBNO1-202ENST00000420886 PTMAP06454 111 aaKnown RBP8.42□□□□□ -1.06
SBNO1-202ENST00000420886 TCERG1O14776 1098 aaKnown RBP8.41□□□□□ -1.06
SBNO1-202ENST00000420886 ARID4BQ4LE39 1312 aaPredicted RBP8.4□□□□□ -1.06
SBNO1-202ENST00000420886 GOLGA6L3A6NEY3 463 aa8.4□□□□□ -1.07
SBNO1-202ENST00000420886 MTERF4Q7Z6M4 381 aaKnown RBP8.39□□□□□ -1.07
SBNO1-202ENST00000420886 FAM43AQ8N2R8 423 aa8.39□□□□□ -1.07
SBNO1-202ENST00000420886 MAP7D2Q96T17 732 aa8.39□□□□□ -1.07
SBNO1-202ENST00000420886 TNNT3P45378 269 aaPredicted RBP8.37□□□□□ -1.07
SBNO1-202ENST00000420886 AMER1Q5JTC6 1135 aaPredicted RBP8.37□□□□□ -1.07
SBNO1-202ENST00000420886 GOLGA3Q08378 1498 aa8.36□□□□□ -1.07
SBNO1-202ENST00000420886 IL27Q8NEV9 243 aa8.35□□□□□ -1.07
SBNO1-202ENST00000420886 RB1CC1Q8TDY2 1594 aa8.34□□□□□ -1.07
SBNO1-202ENST00000420886 TPM2P07951 284 aa8.34□□□□□ -1.08
SBNO1-202ENST00000420886 CLIP1P30622 1438 aa8.33□□□□□ -1.08
SBNO1-202ENST00000420886 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
SBNO1-202ENST00000420886 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
SBNO1-202ENST00000420886 PDE4CQ08493 712 aa8.3□□□□□ -1.08
SBNO1-202ENST00000420886 TAF3Q5VWG9 929 aa8.3□□□□□ -1.08
SBNO1-202ENST00000420886 TNIKQ9UKE5 1360 aa8.3□□□□□ -1.08
SBNO1-202ENST00000420886 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.3□□□□□ -1.08
SBNO1-202ENST00000420886 GBP4Q96PP9 640 aa8.3□□□□□ -1.08
SBNO1-202ENST00000420886 KIAA2012Q0VF49 1180 aa8.29□□□□□ -1.08
SBNO1-202ENST00000420886 HSCBQ8IWL3 235 aa8.29□□□□□ -1.08
SBNO1-202ENST00000420886 ZMYND15Q9H091 742 aa8.28□□□□□ -1.08
SBNO1-202ENST00000420886 DDX11L8A8MPP1 907 aa8.27□□□□□ -1.08
SBNO1-202ENST00000420886 ARID3AQ99856 593 aa8.27□□□□□ -1.09
SBNO1-202ENST00000420886 HSP90AB1P08238 724 aaKnown RBP8.26□□□□□ -1.09
SBNO1-202ENST00000420886 APPP05067 770 aa8.26□□□□□ -1.09
SBNO1-202ENST00000420886 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
SBNO1-202ENST00000420886 SLC4A1APQ9BWU0 796 aaKnown RBP8.26□□□□□ -1.09
SBNO1-202ENST00000420886 SCRIBQ14160 1630 aa8.26□□□□□ -1.09
SBNO1-202ENST00000420886 HIRIP3Q9BW71 556 aaPredicted RBP8.26□□□□□ -1.09
SBNO1-202ENST00000420886 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
SBNO1-202ENST00000420886 MS4A1P11836 297 aa8.26□□□□□ -1.09
SBNO1-202ENST00000420886 GOLGA6L6A8MZA4 724 aa8.26□□□□□ -1.09
SBNO1-202ENST00000420886 WDR43Q15061 677 aaKnown RBP eCLIP8.26□□□□□ -1.09
SBNO1-202ENST00000420886 BRPF3Q9ULD4 1205 aa8.26□□□□□ -1.09
SBNO1-202ENST00000420886 WRNQ14191 1432 aaPredicted RBP eCLIP8.25□□□□□ -1.09
SBNO1-202ENST00000420886 ZNF771Q7L3S4 317 aaPredicted RBP8.24□□□□□ -1.09
SBNO1-202ENST00000420886 CEP164Q9UPV0 1460 aa8.24□□□□□ -1.09
SBNO1-202ENST00000420886 FAM13BQ9NYF5 915 aa8.24□□□□□ -1.09
SBNO1-202ENST00000420886 RGS3P49796 1198 aa8.23□□□□□ -1.09
SBNO1-202ENST00000420886 MSH5O43196 834 aa8.23□□□□□ -1.09
SBNO1-202ENST00000420886 FRAT1Q92837 279 aaPredicted RBP8.23□□□□□ -1.09
SBNO1-202ENST00000420886 ABCC9O60706 1549 aa8.23□□□□□ -1.09
SBNO1-202ENST00000420886 ZBED9Q6R2W3 1325 aa8.23□□□□□ -1.09
SBNO1-202ENST00000420886 NFKBIBQ15653 356 aa8.23□□□□□ -1.09
SBNO1-202ENST00000420886 SKOR2Q2VWA4 1001 aaPredicted RBP8.23□□□□□ -1.09
SBNO1-202ENST00000420886 PDE4AP27815 886 aa8.22□□□□□ -1.09
SBNO1-202ENST00000420886 CASC1Q6TDU7 716 aa8.22□□□□□ -1.09
SBNO1-202ENST00000420886 CCDC66A2RUB6 948 aa8.21□□□□□ -1.09
SBNO1-202ENST00000420886 NRDCO43847 1150 aa8.21□□□□□ -1.09
SBNO1-202ENST00000420886 CALRP27797 417 aaKnown RBP8.21□□□□□ -1.09
SBNO1-202ENST00000420886 PDCL3Q9H2J4 239 aa8.21□□□□□ -1.09
SBNO1-202ENST00000420886 NUDCQ9Y266 331 aa8.21□□□□□ -1.1
SBNO1-202ENST00000420886 SYAP1Q96A49 352 aaPredicted RBP8.21□□□□□ -1.1
SBNO1-202ENST00000420886 GOLGA6L1Q8N7Z2 621 aa8.21□□□□□ -1.1
SBNO1-202ENST00000420886 SLKQ9H2G2 1235 aaPredicted RBP8.21□□□□□ -1.1
SBNO1-202ENST00000420886 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
SBNO1-202ENST00000420886 PHF14O94880 888 aa8.18□□□□□ -1.1
SBNO1-202ENST00000420886 RCAN3Q9UKA8 241 aa8.18□□□□□ -1.1
SBNO1-202ENST00000420886 CCNB3Q8WWL7 1395 aa8.18□□□□□ -1.1
SBNO1-202ENST00000420886 FAM161AQ3B820 660 aa8.18□□□□□ -1.1
SBNO1-202ENST00000420886 TAF7LQ5H9L4 462 aa8.18□□□□□ -1.1
SBNO1-202ENST00000420886 MRE11P49959 708 aa8.18□□□□□ -1.1
SBNO1-202ENST00000420886 SETQ01105 290 aaPredicted RBP8.18□□□□□ -1.1
SBNO1-202ENST00000420886 PAK3O75914 559 aaPredicted RBP8.16□□□□□ -1.1
SBNO1-202ENST00000420886 KCNH8Q96L42 1107 aa8.16□□□□□ -1.1
SBNO1-202ENST00000420886 ISY1Q9ULR0 285 aaKnown RBP8.16□□□□□ -1.1
SBNO1-202ENST00000420886 NOM1Q5C9Z4 860 aaKnown RBP8.16□□□□□ -1.1
SBNO1-202ENST00000420886 VPS8Q8N3P4 1428 aa8.16□□□□□ -1.1
SBNO1-202ENST00000420886 SETD5Q9C0A6 1442 aa8.15□□□□□ -1.1
SBNO1-202ENST00000420886 ZRSR1Q15695 479 aaKnown RBP8.15□□□□□ -1.1
SBNO1-202ENST00000420886 PLCB2Q00722 1185 aa8.15□□□□□ -1.11
SBNO1-202ENST00000420886 TEX35Q5T0J7 233 aa8.15□□□□□ -1.11
SBNO1-202ENST00000420886 CENPQQ7L2Z9 268 aaPredicted RBP8.14□□□□□ -1.11
SBNO1-202ENST00000420886 HTATSF1O43719 755 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms