RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
CROCCP3-202ENST00000420820 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
CROCCP3-202ENST00000420820 CFAP43Q8NDM7 1665 aa28.42■■■□□ 2.14
CROCCP3-202ENST00000420820 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
CROCCP3-202ENST00000420820 PCF11O94913 1555 aaKnown RBP28.4■■■□□ 2.14
CROCCP3-202ENST00000420820 LRRC9Q6ZRR7 1453 aa28.38■■■□□ 2.13
CROCCP3-202ENST00000420820 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
CROCCP3-202ENST00000420820 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.13
CROCCP3-202ENST00000420820 FYCO1Q9BQS8 1478 aa28.33■■■□□ 2.13
CROCCP3-202ENST00000420820 FHOD3Q2V2M9 1422 aa28.33■■■□□ 2.13
CROCCP3-202ENST00000420820 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
CROCCP3-202ENST00000420820 SAMD9Q5K651 1589 aa28.3■■■□□ 2.12
CROCCP3-202ENST00000420820 MRC2Q9UBG0 1479 aa28.29■■■□□ 2.12
CROCCP3-202ENST00000420820 CLSPNQ9HAW4 1339 aa28.27■■■□□ 2.12
CROCCP3-202ENST00000420820 PBRM1Q86U86 1689 aa28.26■■■□□ 2.11
CROCCP3-202ENST00000420820 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
CROCCP3-202ENST00000420820 DHX57Q6P158 1386 aaKnown RBP28.24■■■□□ 2.11
CROCCP3-202ENST00000420820 ERCC6Q03468 1493 aa28.24■■■□□ 2.11
CROCCP3-202ENST00000420820 FMN1Q68DA7 1419 aa28.22■■■□□ 2.11
CROCCP3-202ENST00000420820 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
CROCCP3-202ENST00000420820 PHLDB1Q86UU1 1377 aa28.18■■■□□ 2.1
CROCCP3-202ENST00000420820 WDR62O43379 1518 aa28.15■■■□□ 2.1
CROCCP3-202ENST00000420820 ADAMTS12P58397 1594 aa28.14■■■□□ 2.1
CROCCP3-202ENST00000420820 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
CROCCP3-202ENST00000420820 DIEXFQ68CQ4 756 aaKnown RBP28.11■■■□□ 2.09
CROCCP3-202ENST00000420820 LRRIQ1Q96JM4 1722 aa28.09■■■□□ 2.09
CROCCP3-202ENST00000420820 IFT140Q96RY7 1462 aa28.08■■■□□ 2.09
CROCCP3-202ENST00000420820 THOC2Q8NI27 1593 aaKnown RBP28.08■■■□□ 2.09
CROCCP3-202ENST00000420820 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
CROCCP3-202ENST00000420820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.05■■■□□ 2.08
CROCCP3-202ENST00000420820 ATP1B4Q9UN42 357 aaPredicted RBP28.01■■■□□ 2.07
CROCCP3-202ENST00000420820 IQGAP2Q13576 1575 aa28■■■□□ 2.07
CROCCP3-202ENST00000420820 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
CROCCP3-202ENST00000420820 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
CROCCP3-202ENST00000420820 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
CROCCP3-202ENST00000420820 ITGAEP38570 1179 aa27.96■■■□□ 2.07
CROCCP3-202ENST00000420820 UGGT2Q9NYU1 1516 aa27.9■■■□□ 2.06
CROCCP3-202ENST00000420820 FGD6Q6ZV73 1430 aa27.9■■■□□ 2.06
CROCCP3-202ENST00000420820 MTUS2Q5JR59 1369 aa27.88■■■□□ 2.05
CROCCP3-202ENST00000420820 MAPKBP1O60336 1514 aa27.88■■■□□ 2.05
CROCCP3-202ENST00000420820 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
CROCCP3-202ENST00000420820 EHBP1L1Q8N3D4 1523 aa27.88■■■□□ 2.05
CROCCP3-202ENST00000420820 EIF4G3O43432 1585 aaKnown RBP27.87■■■□□ 2.05
CROCCP3-202ENST00000420820 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
CROCCP3-202ENST00000420820 SUPT6HQ7KZ85 1726 aaKnown RBP27.86■■■□□ 2.05
CROCCP3-202ENST00000420820 HECW1Q76N89 1606 aa27.84■■■□□ 2.05
CROCCP3-202ENST00000420820 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
CROCCP3-202ENST00000420820 NCOA2Q15596 1464 aa27.84■■■□□ 2.05
CROCCP3-202ENST00000420820 MAGI3Q5TCQ9 1506 aa27.8■■■□□ 2.04
CROCCP3-202ENST00000420820 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
CROCCP3-202ENST00000420820 MYOM3Q5VTT5 1437 aa27.79■■■□□ 2.04
CROCCP3-202ENST00000420820 GRIN2AQ12879 1464 aa27.77■■■□□ 2.04
CROCCP3-202ENST00000420820 EPRSP07814 1512 aaKnown RBP27.75■■■□□ 2.03
CROCCP3-202ENST00000420820 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
CROCCP3-202ENST00000420820 DISP1Q96F81 1524 aa27.73■■■□□ 2.03
CROCCP3-202ENST00000420820 KIAA0556O60303 1618 aa27.72■■■□□ 2.03
CROCCP3-202ENST00000420820 PTPRKQ15262 1439 aa27.69■■■□□ 2.02
CROCCP3-202ENST00000420820 PTPN23Q9H3S7 1636 aa27.68■■■□□ 2.02
CROCCP3-202ENST00000420820 HFM1A2PYH4 1435 aa27.66■■■□□ 2.02
CROCCP3-202ENST00000420820 TCOF1Q13428 1488 aaKnown RBP27.66■■■□□ 2.02
CROCCP3-202ENST00000420820 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
CROCCP3-202ENST00000420820 CDK13Q14004 1512 aaKnown RBP27.63■■■□□ 2.01
CROCCP3-202ENST00000420820 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
CROCCP3-202ENST00000420820 ACIN1Q9UKV3 1341 aaKnown RBP27.57■■■□□ 2
CROCCP3-202ENST00000420820 NAIPQ13075 1403 aa27.57■■■□□ 2
CROCCP3-202ENST00000420820 MIER1Q8N108 512 aa27.57■■■□□ 2
CROCCP3-202ENST00000420820 SCAF1Q9H7N4 1312 aaKnown RBP27.57■■■□□ 2
CROCCP3-202ENST00000420820 RAPGEF6Q8TEU7 1601 aa27.56■■■□□ 2
CROCCP3-202ENST00000420820 MIA2Q96PC5 1412 aa27.56■■■□□ 2
CROCCP3-202ENST00000420820 NUP153P49790 1475 aaKnown RBP27.54■■■□□ 2
CROCCP3-202ENST00000420820 TIMELESSQ9UNS1 1208 aa27.54■■■□□ 2
CROCCP3-202ENST00000420820 NUP160Q12769 1436 aa27.53■■■□□ 2
CROCCP3-202ENST00000420820 UACAQ9BZF9 1416 aa27.52■■■□□ 2
CROCCP3-202ENST00000420820 NEUROD1Q13562 356 aa27.51■■□□□ 1.99
CROCCP3-202ENST00000420820 GCC2Q8IWJ2 1684 aa27.49■■□□□ 1.99
CROCCP3-202ENST00000420820 CENPBP07199 599 aaPredicted RBP27.49■■□□□ 1.99
CROCCP3-202ENST00000420820 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
CROCCP3-202ENST00000420820 AKNAQ7Z591 1439 aa27.49■■□□□ 1.99
CROCCP3-202ENST00000420820 SIN3AQ96ST3 1273 aa27.48■■□□□ 1.99
CROCCP3-202ENST00000420820 CARMIL2Q6F5E8 1435 aa27.36■■□□□ 1.97
CROCCP3-202ENST00000420820 ARID3CA6NKF2 412 aa27.35■■□□□ 1.97
CROCCP3-202ENST00000420820 FBLN2P98095 1184 aa27.35■■□□□ 1.97
CROCCP3-202ENST00000420820 JPH4Q96JJ6 628 aa27.34■■□□□ 1.97
CROCCP3-202ENST00000420820 PLB1Q6P1J6 1458 aa27.34■■□□□ 1.97
CROCCP3-202ENST00000420820 ADCY10Q96PN6 1610 aa27.33■■□□□ 1.97
CROCCP3-202ENST00000420820 PPP1R15AO75807 674 aaPredicted RBP27.33■■□□□ 1.97
CROCCP3-202ENST00000420820 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.96
CROCCP3-202ENST00000420820 DNMT1P26358 1616 aaKnown RBP27.32■■□□□ 1.96
CROCCP3-202ENST00000420820 CDK11AQ9UQ88 783 aaPredicted RBP27.32■■□□□ 1.96
CROCCP3-202ENST00000420820 KDM6BO15054 1643 aa27.3■■□□□ 1.96
CROCCP3-202ENST00000420820 ROCK1Q13464 1354 aa27.29■■□□□ 1.96
CROCCP3-202ENST00000420820 DAPK1P53355 1430 aa27.28■■□□□ 1.96
CROCCP3-202ENST00000420820 ABCA8O94911 1581 aa27.28■■□□□ 1.96
CROCCP3-202ENST00000420820 RRP7BPQ9NSQ0 103 aa27.28■■□□□ 1.96
CROCCP3-202ENST00000420820 DENND4BO75064 1496 aaPredicted RBP27.27■■□□□ 1.96
CROCCP3-202ENST00000420820 PRG4Q92954 1404 aaPredicted RBP27.26■■□□□ 1.95
CROCCP3-202ENST00000420820 ITSN2Q9NZM3 1697 aa27.25■■□□□ 1.95
CROCCP3-202ENST00000420820 ABCC5O15440 1437 aa27.25■■□□□ 1.95
CROCCP3-202ENST00000420820 CHIC2Q9UKJ5 165 aa27.25■■□□□ 1.95
CROCCP3-202ENST00000420820 KDM5BQ9UGL1 1544 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms