RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
MSH6-203ENST00000420813 IGF1RP08069 1367 aa30.31■■■□□ 2.44
MSH6-203ENST00000420813 KIAA0586Q9BVV6 1533 aa30.22■■■□□ 2.43
MSH6-203ENST00000420813 KIF13AQ9H1H9 1805 aa30.12■■■□□ 2.41
MSH6-203ENST00000420813 CARMIL1Q5VZK9 1371 aa30.12■■■□□ 2.41
MSH6-203ENST00000420813 ADCY10Q96PN6 1610 aa30.04■■■□□ 2.4
MSH6-203ENST00000420813 MAPKBP1O60336 1514 aa30.01■■■□□ 2.4
MSH6-203ENST00000420813 IQGAP2Q13576 1575 aa29.98■■■□□ 2.39
MSH6-203ENST00000420813 NPM1P06748 294 aaKnown RBP eCLIP29.97■■■□□ 2.39
MSH6-203ENST00000420813 ABCC10Q5T3U5 1492 aa29.93■■■□□ 2.38
MSH6-203ENST00000420813 CARMIL2Q6F5E8 1435 aa29.92■■■□□ 2.38
MSH6-203ENST00000420813 RAPGEF2Q9Y4G8 1499 aa29.89■■■□□ 2.38
MSH6-203ENST00000420813 DIP2BQ9P265 1576 aa29.89■■■□□ 2.38
MSH6-203ENST00000420813 PTPRGP23470 1445 aa29.88■■■□□ 2.37
MSH6-203ENST00000420813 TNIKQ9UKE5 1360 aa29.87■■■□□ 2.37
MSH6-203ENST00000420813 FAM69CQ0P6D2 419 aa29.83■■■□□ 2.37
MSH6-203ENST00000420813 DISP1Q96F81 1524 aa29.79■■■□□ 2.36
MSH6-203ENST00000420813 UGGT2Q9NYU1 1516 aa29.79■■■□□ 2.36
MSH6-203ENST00000420813 ABCC2Q92887 1545 aa29.76■■■□□ 2.35
MSH6-203ENST00000420813 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
MSH6-203ENST00000420813 UHRF1BP1LA0JNW5 1464 aa29.74■■■□□ 2.35
MSH6-203ENST00000420813 KIAA0556O60303 1618 aa29.71■■■□□ 2.35
MSH6-203ENST00000420813 TTBK1Q5TCY1 1321 aaPredicted RBP29.71■■■□□ 2.35
MSH6-203ENST00000420813 UACAQ9BZF9 1416 aa29.69■■■□□ 2.34
MSH6-203ENST00000420813 TSPOAP1O95153 1857 aa29.68■■■□□ 2.34
MSH6-203ENST00000420813 AEBP2Q6ZN18 517 aaPredicted RBP29.66■■■□□ 2.34
MSH6-203ENST00000420813 PLB1Q6P1J6 1458 aa29.63■■■□□ 2.33
MSH6-203ENST00000420813 ASXL2Q76L83 1435 aa29.62■■■□□ 2.33
MSH6-203ENST00000420813 PRXQ9BXM0 1461 aa29.61■■■□□ 2.33
MSH6-203ENST00000420813 KDM5BQ9UGL1 1544 aa29.6■■■□□ 2.33
MSH6-203ENST00000420813 GLI2P10070 1586 aa29.6■■■□□ 2.33
MSH6-203ENST00000420813 KDM6BO15054 1643 aa29.6■■■□□ 2.33
MSH6-203ENST00000420813 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
MSH6-203ENST00000420813 ZCCHC11Q5TAX3 1644 aaKnown RBP29.55■■■□□ 2.32
MSH6-203ENST00000420813 PPRC1Q5VV67 1664 aaKnown RBP29.51■■■□□ 2.31
MSH6-203ENST00000420813 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.31
MSH6-203ENST00000420813 MAP3K4Q9Y6R4 1608 aa29.44■■■□□ 2.3
MSH6-203ENST00000420813 ABCA8O94911 1581 aa29.42■■■□□ 2.3
MSH6-203ENST00000420813 WDR7Q9Y4E6 1490 aa29.37■■■□□ 2.29
MSH6-203ENST00000420813 CSRNP3Q8WYN3 585 aa29.35■■■□□ 2.29
MSH6-203ENST00000420813 EEA1Q15075 1411 aa29.34■■■□□ 2.29
MSH6-203ENST00000420813 TEX14Q8IWB6 1497 aa29.33■■■□□ 2.29
MSH6-203ENST00000420813 SAMD9Q5K651 1589 aa29.28■■■□□ 2.28
MSH6-203ENST00000420813 CFAP43Q8NDM7 1665 aa29.26■■■□□ 2.27
MSH6-203ENST00000420813 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
MSH6-203ENST00000420813 COL17A1Q9UMD9 1497 aaPredicted RBP29.21■■■□□ 2.27
MSH6-203ENST00000420813 MAGI3Q5TCQ9 1506 aa29.18■■■□□ 2.26
MSH6-203ENST00000420813 KDM4FA0A1W2PPD8 638 aa29.16■■■□□ 2.26
MSH6-203ENST00000420813 P3H3Q8IVL6 736 aa29.16■■■□□ 2.26
MSH6-203ENST00000420813 CD109Q6YHK3 1445 aa29.15■■■□□ 2.26
MSH6-203ENST00000420813 RAPGEF6Q8TEU7 1601 aa29.13■■■□□ 2.25
MSH6-203ENST00000420813 ATP10BO94823 1461 aa29.13■■■□□ 2.25
MSH6-203ENST00000420813 KCNH8Q96L42 1107 aa29.12■■■□□ 2.25
MSH6-203ENST00000420813 KIF21BO75037 1637 aa29.12■■■□□ 2.25
MSH6-203ENST00000420813 ABCA9Q8IUA7 1624 aa29.03■■■□□ 2.24
MSH6-203ENST00000420813 ARID3CA6NKF2 412 aa29.02■■■□□ 2.24
MSH6-203ENST00000420813 EFCAB5A4FU69 1503 aa29.01■■■□□ 2.23
MSH6-203ENST00000420813 ADGRL1O94910 1474 aa29.01■■■□□ 2.23
MSH6-203ENST00000420813 FHOD3Q2V2M9 1422 aa28.99■■■□□ 2.23
MSH6-203ENST00000420813 NUP153P49790 1475 aaKnown RBP28.98■■■□□ 2.23
MSH6-203ENST00000420813 ARAP3Q8WWN8 1544 aa28.94■■■□□ 2.22
MSH6-203ENST00000420813 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
MSH6-203ENST00000420813 PHLDB1Q86UU1 1377 aa28.91■■■□□ 2.22
MSH6-203ENST00000420813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.88■■■□□ 2.21
MSH6-203ENST00000420813 HNRNPUL2Q1KMD3 747 aaKnown RBP28.88■■■□□ 2.21
MSH6-203ENST00000420813 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
MSH6-203ENST00000420813 NEO1Q92859 1461 aa28.85■■■□□ 2.21
MSH6-203ENST00000420813 PLEKHD1A6NEE1 506 aa28.79■■■□□ 2.2
MSH6-203ENST00000420813 UBTFP17480 764 aaKnown RBP28.76■■■□□ 2.19
MSH6-203ENST00000420813 CFAP74Q9C0B2 1584 aa28.72■■■□□ 2.19
MSH6-203ENST00000420813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.72■■■□□ 2.19
MSH6-203ENST00000420813 FRMPD1Q5SYB0 1578 aa28.71■■■□□ 2.19
MSH6-203ENST00000420813 FMN1Q68DA7 1419 aa28.71■■■□□ 2.19
MSH6-203ENST00000420813 ARHGAP35Q9NRY4 1499 aa28.7■■■□□ 2.18
MSH6-203ENST00000420813 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
MSH6-203ENST00000420813 HECW1Q76N89 1606 aa28.69■■■□□ 2.18
MSH6-203ENST00000420813 TTC37Q6PGP7 1564 aa28.68■■■□□ 2.18
MSH6-203ENST00000420813 RAPGEF3O95398 923 aa28.67■■■□□ 2.18
MSH6-203ENST00000420813 EHMT2Q96KQ7 1210 aa28.66■■■□□ 2.18
MSH6-203ENST00000420813 RICTORQ6R327 1708 aa28.66■■■□□ 2.18
MSH6-203ENST00000420813 FANCAO15360 1455 aa28.64■■■□□ 2.17
MSH6-203ENST00000420813 AKNAQ7Z591 1439 aa28.62■■■□□ 2.17
MSH6-203ENST00000420813 DENND4BO75064 1496 aaPredicted RBP28.61■■■□□ 2.17
MSH6-203ENST00000420813 HECW2Q9P2P5 1572 aa28.6■■■□□ 2.17
MSH6-203ENST00000420813 ADAMTSL3P82987 1691 aa28.59■■■□□ 2.17
MSH6-203ENST00000420813 ARHGEF40Q8TER5 1519 aa28.58■■■□□ 2.17
MSH6-203ENST00000420813 BCORL1Q5H9F3 1711 aa28.55■■■□□ 2.16
MSH6-203ENST00000420813 MYO5CQ9NQX4 1742 aa28.55■■■□□ 2.16
MSH6-203ENST00000420813 ZMYM4Q5VZL5 1548 aa28.54■■■□□ 2.16
MSH6-203ENST00000420813 PLCH2O75038 1416 aa28.52■■■□□ 2.16
MSH6-203ENST00000420813 LRRIQ1Q96JM4 1722 aa28.52■■■□□ 2.16
MSH6-203ENST00000420813 ATP1B4Q9UN42 357 aaPredicted RBP28.52■■■□□ 2.16
MSH6-203ENST00000420813 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
MSH6-203ENST00000420813 KIF14Q15058 1648 aa28.49■■■□□ 2.15
MSH6-203ENST00000420813 PTPRMP28827 1452 aa28.46■■■□□ 2.15
MSH6-203ENST00000420813 TROQ12816 1431 aaPredicted RBP28.46■■■□□ 2.15
MSH6-203ENST00000420813 MAGI2Q86UL8 1455 aa28.46■■■□□ 2.15
MSH6-203ENST00000420813 ZFYVE16Q7Z3T8 1539 aa28.44■■■□□ 2.14
MSH6-203ENST00000420813 MADDQ8WXG6 1647 aa28.44■■■□□ 2.14
MSH6-203ENST00000420813 CLIP1P30622 1438 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms