RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
TMEM53-206ENST00000420706 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
TMEM53-206ENST00000420706 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
TMEM53-206ENST00000420706 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
TMEM53-206ENST00000420706 CTTNBP2Q8WZ74 1663 aa20.2■□□□□ 0.82
TMEM53-206ENST00000420706 IQGAP2Q13576 1575 aa20.14■□□□□ 0.81
TMEM53-206ENST00000420706 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
TMEM53-206ENST00000420706 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
TMEM53-206ENST00000420706 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-206ENST00000420706 UGGT2Q9NYU1 1516 aa20.07■□□□□ 0.8
TMEM53-206ENST00000420706 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
TMEM53-206ENST00000420706 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
TMEM53-206ENST00000420706 CLIP1P30622 1438 aa20.03■□□□□ 0.8
TMEM53-206ENST00000420706 PRG4Q92954 1404 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-206ENST00000420706 P3H3Q8IVL6 736 aa20■□□□□ 0.79
TMEM53-206ENST00000420706 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
TMEM53-206ENST00000420706 DISP1Q96F81 1524 aa19.99■□□□□ 0.79
TMEM53-206ENST00000420706 SAMD9Q5K651 1589 aa19.98■□□□□ 0.79
TMEM53-206ENST00000420706 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
TMEM53-206ENST00000420706 CARMIL2Q6F5E8 1435 aa19.97■□□□□ 0.79
TMEM53-206ENST00000420706 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
TMEM53-206ENST00000420706 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
TMEM53-206ENST00000420706 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
TMEM53-206ENST00000420706 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
TMEM53-206ENST00000420706 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-206ENST00000420706 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
TMEM53-206ENST00000420706 PTPRGP23470 1445 aa19.84■□□□□ 0.77
TMEM53-206ENST00000420706 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
TMEM53-206ENST00000420706 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
TMEM53-206ENST00000420706 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
TMEM53-206ENST00000420706 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
TMEM53-206ENST00000420706 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
TMEM53-206ENST00000420706 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
TMEM53-206ENST00000420706 PLB1Q6P1J6 1458 aa19.73■□□□□ 0.75
TMEM53-206ENST00000420706 ABCA8O94911 1581 aa19.72■□□□□ 0.75
TMEM53-206ENST00000420706 CASKIN1Q8WXD9 1431 aa19.72■□□□□ 0.75
TMEM53-206ENST00000420706 UACAQ9BZF9 1416 aa19.72■□□□□ 0.75
TMEM53-206ENST00000420706 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
TMEM53-206ENST00000420706 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
TMEM53-206ENST00000420706 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
TMEM53-206ENST00000420706 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
TMEM53-206ENST00000420706 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
TMEM53-206ENST00000420706 ABCC2Q92887 1545 aa19.65■□□□□ 0.74
TMEM53-206ENST00000420706 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
TMEM53-206ENST00000420706 HECW1Q76N89 1606 aa19.63■□□□□ 0.73
TMEM53-206ENST00000420706 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
TMEM53-206ENST00000420706 ADCY10Q96PN6 1610 aa19.6■□□□□ 0.73
TMEM53-206ENST00000420706 EPRSP07814 1512 aaKnown RBP19.6■□□□□ 0.73
TMEM53-206ENST00000420706 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
TMEM53-206ENST00000420706 APLP2Q06481 763 aa19.59■□□□□ 0.73
TMEM53-206ENST00000420706 ATP10BO94823 1461 aa19.59■□□□□ 0.73
TMEM53-206ENST00000420706 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
TMEM53-206ENST00000420706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.56■□□□□ 0.72
TMEM53-206ENST00000420706 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
TMEM53-206ENST00000420706 CCDC18Q5T9S5 1454 aa19.55■□□□□ 0.72
TMEM53-206ENST00000420706 MAP3K1Q13233 1512 aa19.55■□□□□ 0.72
TMEM53-206ENST00000420706 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
TMEM53-206ENST00000420706 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
TMEM53-206ENST00000420706 TIAM1Q13009 1591 aa19.52■□□□□ 0.71
TMEM53-206ENST00000420706 ZCCHC11Q5TAX3 1644 aaKnown RBP19.51■□□□□ 0.71
TMEM53-206ENST00000420706 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
TMEM53-206ENST00000420706 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
TMEM53-206ENST00000420706 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
TMEM53-206ENST00000420706 PLEKHD1A6NEE1 506 aa19.49■□□□□ 0.71
TMEM53-206ENST00000420706 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
TMEM53-206ENST00000420706 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
TMEM53-206ENST00000420706 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
TMEM53-206ENST00000420706 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
TMEM53-206ENST00000420706 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
TMEM53-206ENST00000420706 ASXL2Q76L83 1435 aa19.41■□□□□ 0.7
TMEM53-206ENST00000420706 EHBP1L1Q8N3D4 1523 aa19.39■□□□□ 0.69
TMEM53-206ENST00000420706 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
TMEM53-206ENST00000420706 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-206ENST00000420706 WDR7Q9Y4E6 1490 aa19.37■□□□□ 0.69
TMEM53-206ENST00000420706 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
TMEM53-206ENST00000420706 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
TMEM53-206ENST00000420706 KIF14Q15058 1648 aa19.31■□□□□ 0.68
TMEM53-206ENST00000420706 NCOA2Q15596 1464 aa19.3■□□□□ 0.68
TMEM53-206ENST00000420706 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
TMEM53-206ENST00000420706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.26■□□□□ 0.67
TMEM53-206ENST00000420706 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
TMEM53-206ENST00000420706 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
TMEM53-206ENST00000420706 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
TMEM53-206ENST00000420706 GLI2P10070 1586 aa19.23■□□□□ 0.67
TMEM53-206ENST00000420706 TTC37Q6PGP7 1564 aa19.22■□□□□ 0.67
TMEM53-206ENST00000420706 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
TMEM53-206ENST00000420706 GPATCH8Q9UKJ3 1502 aaKnown RBP19.21■□□□□ 0.67
TMEM53-206ENST00000420706 DIP2BQ9P265 1576 aa19.21■□□□□ 0.67
TMEM53-206ENST00000420706 MYOM3Q5VTT5 1437 aa19.19■□□□□ 0.66
TMEM53-206ENST00000420706 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
TMEM53-206ENST00000420706 PLCH2O75038 1416 aa19.17■□□□□ 0.66
TMEM53-206ENST00000420706 CD109Q6YHK3 1445 aa19.17■□□□□ 0.66
TMEM53-206ENST00000420706 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
TMEM53-206ENST00000420706 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
TMEM53-206ENST00000420706 MYO5CQ9NQX4 1742 aa19.15■□□□□ 0.66
TMEM53-206ENST00000420706 MIA2Q96PC5 1412 aa19.15■□□□□ 0.66
TMEM53-206ENST00000420706 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.66
TMEM53-206ENST00000420706 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
TMEM53-206ENST00000420706 FGD6Q6ZV73 1430 aa19.14■□□□□ 0.65
TMEM53-206ENST00000420706 MAP3K4Q9Y6R4 1608 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms