RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
ITSN1-215ENST00000420666 KIAA0586Q9BVV6 1533 aa25.72■■□□□ 1.71
ITSN1-215ENST00000420666 NPM1P06748 294 aaKnown RBP eCLIP25.71■■□□□ 1.71
ITSN1-215ENST00000420666 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
ITSN1-215ENST00000420666 CARMIL1Q5VZK9 1371 aa25.63■■□□□ 1.69
ITSN1-215ENST00000420666 FAM69CQ0P6D2 419 aa25.62■■□□□ 1.69
ITSN1-215ENST00000420666 CUL7Q14999 1698 aa25.61■■□□□ 1.69
ITSN1-215ENST00000420666 ABCC10Q5T3U5 1492 aa25.59■■□□□ 1.69
ITSN1-215ENST00000420666 MAPKBP1O60336 1514 aa25.56■■□□□ 1.68
ITSN1-215ENST00000420666 KIF13AQ9H1H9 1805 aa25.53■■□□□ 1.68
ITSN1-215ENST00000420666 PTPRGP23470 1445 aa25.53■■□□□ 1.68
ITSN1-215ENST00000420666 ADCY10Q96PN6 1610 aa25.52■■□□□ 1.68
ITSN1-215ENST00000420666 CARMIL2Q6F5E8 1435 aa25.47■■□□□ 1.67
ITSN1-215ENST00000420666 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
ITSN1-215ENST00000420666 DIP2BQ9P265 1576 aa25.44■■□□□ 1.66
ITSN1-215ENST00000420666 TTBK1Q5TCY1 1321 aaPredicted RBP25.43■■□□□ 1.66
ITSN1-215ENST00000420666 IQGAP2Q13576 1575 aa25.37■■□□□ 1.65
ITSN1-215ENST00000420666 ABCC2Q92887 1545 aa25.35■■□□□ 1.65
ITSN1-215ENST00000420666 RAPGEF2Q9Y4G8 1499 aa25.34■■□□□ 1.65
ITSN1-215ENST00000420666 UACAQ9BZF9 1416 aa25.31■■□□□ 1.64
ITSN1-215ENST00000420666 UHRF1BP1LA0JNW5 1464 aa25.31■■□□□ 1.64
ITSN1-215ENST00000420666 DISP1Q96F81 1524 aa25.31■■□□□ 1.64
ITSN1-215ENST00000420666 ASXL2Q76L83 1435 aa25.29■■□□□ 1.64
ITSN1-215ENST00000420666 PLB1Q6P1J6 1458 aa25.28■■□□□ 1.64
ITSN1-215ENST00000420666 UGGT2Q9NYU1 1516 aa25.26■■□□□ 1.63
ITSN1-215ENST00000420666 KDM6BO15054 1643 aa25.23■■□□□ 1.63
ITSN1-215ENST00000420666 GLI2P10070 1586 aa25.19■■□□□ 1.62
ITSN1-215ENST00000420666 KDM5BQ9UGL1 1544 aa25.18■■□□□ 1.62
ITSN1-215ENST00000420666 TSPOAP1O95153 1857 aa25.17■■□□□ 1.62
ITSN1-215ENST00000420666 KDM4FA0A1W2PPD8 638 aa25.15■■□□□ 1.62
ITSN1-215ENST00000420666 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
ITSN1-215ENST00000420666 EPRSP07814 1512 aaKnown RBP25.12■■□□□ 1.61
ITSN1-215ENST00000420666 PRXQ9BXM0 1461 aa25.08■■□□□ 1.6
ITSN1-215ENST00000420666 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
ITSN1-215ENST00000420666 PPRC1Q5VV67 1664 aaKnown RBP25.04■■□□□ 1.6
ITSN1-215ENST00000420666 ZCCHC11Q5TAX3 1644 aaKnown RBP25.02■■□□□ 1.6
ITSN1-215ENST00000420666 TEX14Q8IWB6 1497 aa25.01■■□□□ 1.59
ITSN1-215ENST00000420666 COL17A1Q9UMD9 1497 aaPredicted RBP25.01■■□□□ 1.59
ITSN1-215ENST00000420666 WDR7Q9Y4E6 1490 aa25■■□□□ 1.59
ITSN1-215ENST00000420666 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
ITSN1-215ENST00000420666 CTTNBP2Q8WZ74 1663 aa24.96■■□□□ 1.59
ITSN1-215ENST00000420666 FAM9AQ8IZU1 332 aaPredicted RBP24.95■■□□□ 1.58
ITSN1-215ENST00000420666 ABCA8O94911 1581 aa24.94■■□□□ 1.58
ITSN1-215ENST00000420666 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
ITSN1-215ENST00000420666 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
ITSN1-215ENST00000420666 CD109Q6YHK3 1445 aa24.9■■□□□ 1.58
ITSN1-215ENST00000420666 P3H3Q8IVL6 736 aa24.88■■□□□ 1.57
ITSN1-215ENST00000420666 MAGI3Q5TCQ9 1506 aa24.87■■□□□ 1.57
ITSN1-215ENST00000420666 ADGRL1O94910 1474 aa24.85■■□□□ 1.57
ITSN1-215ENST00000420666 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
ITSN1-215ENST00000420666 ATP10BO94823 1461 aa24.8■■□□□ 1.56
ITSN1-215ENST00000420666 CFAP43Q8NDM7 1665 aa24.77■■□□□ 1.56
ITSN1-215ENST00000420666 EEA1Q15075 1411 aa24.76■■□□□ 1.55
ITSN1-215ENST00000420666 SAMD9Q5K651 1589 aa24.7■■□□□ 1.54
ITSN1-215ENST00000420666 PHLDB1Q86UU1 1377 aa24.68■■□□□ 1.54
ITSN1-215ENST00000420666 ARAP3Q8WWN8 1544 aa24.67■■□□□ 1.54
ITSN1-215ENST00000420666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
ITSN1-215ENST00000420666 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
ITSN1-215ENST00000420666 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
ITSN1-215ENST00000420666 RAPGEF6Q8TEU7 1601 aa24.62■■□□□ 1.53
ITSN1-215ENST00000420666 FHOD3Q2V2M9 1422 aa24.6■■□□□ 1.53
ITSN1-215ENST00000420666 NUP153P49790 1475 aaKnown RBP24.59■■□□□ 1.53
ITSN1-215ENST00000420666 ABCA9Q8IUA7 1624 aa24.59■■□□□ 1.53
ITSN1-215ENST00000420666 PLEKHD1A6NEE1 506 aa24.57■■□□□ 1.52
ITSN1-215ENST00000420666 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
ITSN1-215ENST00000420666 NEO1Q92859 1461 aa24.56■■□□□ 1.52
ITSN1-215ENST00000420666 HECW2Q9P2P5 1572 aa24.49■■□□□ 1.51
ITSN1-215ENST00000420666 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
ITSN1-215ENST00000420666 KIF21BO75037 1637 aa24.46■■□□□ 1.51
ITSN1-215ENST00000420666 ILDR1Q86SU0 546 aaPredicted RBP24.46■■□□□ 1.51
ITSN1-215ENST00000420666 UBTFP17480 764 aaKnown RBP24.42■■□□□ 1.5
ITSN1-215ENST00000420666 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
ITSN1-215ENST00000420666 AKNAQ7Z591 1439 aa24.4■■□□□ 1.5
ITSN1-215ENST00000420666 ARID4BQ4LE39 1312 aaPredicted RBP24.39■■□□□ 1.5
ITSN1-215ENST00000420666 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
ITSN1-215ENST00000420666 FANCAO15360 1455 aa24.37■■□□□ 1.49
ITSN1-215ENST00000420666 FRMPD1Q5SYB0 1578 aa24.37■■□□□ 1.49
ITSN1-215ENST00000420666 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.36■■□□□ 1.49
ITSN1-215ENST00000420666 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
ITSN1-215ENST00000420666 PTPRMP28827 1452 aa24.36■■□□□ 1.49
ITSN1-215ENST00000420666 ADAMTSL3P82987 1691 aa24.34■■□□□ 1.49
ITSN1-215ENST00000420666 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
ITSN1-215ENST00000420666 ATP1B4Q9UN42 357 aaPredicted RBP24.31■■□□□ 1.48
ITSN1-215ENST00000420666 CDK13Q14004 1512 aaKnown RBP24.3■■□□□ 1.48
ITSN1-215ENST00000420666 CDK11AQ9UQ88 783 aaPredicted RBP24.29■■□□□ 1.48
ITSN1-215ENST00000420666 PLCH2O75038 1416 aa24.28■■□□□ 1.48
ITSN1-215ENST00000420666 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
ITSN1-215ENST00000420666 TTC37Q6PGP7 1564 aa24.27■■□□□ 1.48
ITSN1-215ENST00000420666 CFAP74Q9C0B2 1584 aa24.27■■□□□ 1.48
ITSN1-215ENST00000420666 ARHGEF40Q8TER5 1519 aa24.26■■□□□ 1.47
ITSN1-215ENST00000420666 BCORL1Q5H9F3 1711 aa24.25■■□□□ 1.47
ITSN1-215ENST00000420666 MAGI2Q86UL8 1455 aa24.24■■□□□ 1.47
ITSN1-215ENST00000420666 RICTORQ6R327 1708 aa24.24■■□□□ 1.47
ITSN1-215ENST00000420666 EFCAB2Q5VUJ9 269 aa24.23■■□□□ 1.47
ITSN1-215ENST00000420666 SCAPERQ9BY12 1400 aa24.23■■□□□ 1.47
ITSN1-215ENST00000420666 ZMYM4Q5VZL5 1548 aa24.22■■□□□ 1.47
ITSN1-215ENST00000420666 POGZQ7Z3K3 1410 aa24.22■■□□□ 1.47
ITSN1-215ENST00000420666 YEATS2Q9ULM3 1422 aa24.21■■□□□ 1.47
ITSN1-215ENST00000420666 MADDQ8WXG6 1647 aa24.2■■□□□ 1.46
ITSN1-215ENST00000420666 HECW1Q76N89 1606 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms