RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 RNF216Q9NWF9 866 aaPredicted RBP6.88□□□□□ -1.31
PTPN22-202ENST00000420377 GRIN2BQ13224 1484 aa6.86□□□□□ -1.31
PTPN22-202ENST00000420377 SLC4A2P04920 1241 aa6.85□□□□□ -1.31
PTPN22-202ENST00000420377 GLI2P10070 1586 aa6.84□□□□□ -1.31
PTPN22-202ENST00000420377 CACNB1Q02641 598 aaPredicted RBP6.82□□□□□ -1.32
PTPN22-202ENST00000420377 FKBP8Q14318 412 aa6.81□□□□□ -1.32
PTPN22-202ENST00000420377 NUP160Q12769 1436 aa6.81□□□□□ -1.32
PTPN22-202ENST00000420377 GAPVD1Q14C86 1478 aa6.81□□□□□ -1.32
PTPN22-202ENST00000420377 ZNF608Q9ULD9 1512 aaPredicted RBP6.8□□□□□ -1.32
PTPN22-202ENST00000420377 WIZO95785 1651 aa6.8□□□□□ -1.32
PTPN22-202ENST00000420377 ABCC10Q5T3U5 1492 aa6.79□□□□□ -1.32
PTPN22-202ENST00000420377 KIF13AQ9H1H9 1805 aa6.79□□□□□ -1.32
PTPN22-202ENST00000420377 TOP2BQ02880 1626 aa6.78□□□□□ -1.32
PTPN22-202ENST00000420377 POLA1P09884 1462 aaPredicted RBP6.77□□□□□ -1.32
PTPN22-202ENST00000420377 ABCA5Q8WWZ7 1642 aa6.77□□□□□ -1.33
PTPN22-202ENST00000420377 KIAA0586Q9BVV6 1533 aa6.77□□□□□ -1.33
PTPN22-202ENST00000420377 PBRM1Q86U86 1689 aa6.77□□□□□ -1.33
PTPN22-202ENST00000420377 AMER1Q5JTC6 1135 aaPredicted RBP6.77□□□□□ -1.33
PTPN22-202ENST00000420377 ABCA10Q8WWZ4 1543 aa6.77□□□□□ -1.33
PTPN22-202ENST00000420377 CYB5RLQ6IPT4 315 aa6.75□□□□□ -1.33
PTPN22-202ENST00000420377 ERICH3Q5RHP9 1530 aa6.75□□□□□ -1.33
PTPN22-202ENST00000420377 TRHP20396 242 aaPredicted RBP6.75□□□□□ -1.33
PTPN22-202ENST00000420377 DMRT2Q9Y5R5 561 aa6.75□□□□□ -1.33
PTPN22-202ENST00000420377 SNAPC4Q5SXM2 1469 aa6.74□□□□□ -1.33
PTPN22-202ENST00000420377 HOXD11P31277 338 aaPredicted RBP6.74□□□□□ -1.33
PTPN22-202ENST00000420377 SOGA1O94964 1423 aa6.74□□□□□ -1.33
PTPN22-202ENST00000420377 BCL11AQ9H165 835 aa6.73□□□□□ -1.33
PTPN22-202ENST00000420377 DIP2BQ9P265 1576 aa6.72□□□□□ -1.33
PTPN22-202ENST00000420377 UHRF1BP1LA0JNW5 1464 aa6.72□□□□□ -1.33
PTPN22-202ENST00000420377 CEP170Q5SW79 1584 aa6.72□□□□□ -1.33
PTPN22-202ENST00000420377 PHLDB1Q86UU1 1377 aa6.72□□□□□ -1.33
PTPN22-202ENST00000420377 CCDC88BA6NC98 1476 aa6.71□□□□□ -1.33
PTPN22-202ENST00000420377 ADAMTS12P58397 1594 aa6.71□□□□□ -1.34
PTPN22-202ENST00000420377 FHAD1B1AJZ9 1412 aa6.71□□□□□ -1.34
PTPN22-202ENST00000420377 KDM6BO15054 1643 aa6.7□□□□□ -1.34
PTPN22-202ENST00000420377 GRIN2AQ12879 1464 aa6.7□□□□□ -1.34
PTPN22-202ENST00000420377 MYCNP04198 464 aaPredicted RBP6.69□□□□□ -1.34
PTPN22-202ENST00000420377 FBXO41Q8TF61 875 aa6.69□□□□□ -1.34
PTPN22-202ENST00000420377 TEX14Q8IWB6 1497 aa6.69□□□□□ -1.34
PTPN22-202ENST00000420377 IQSEC2Q5JU85 1478 aa6.68□□□□□ -1.34
PTPN22-202ENST00000420377 AQRO60306 1485 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTPN22-202ENST00000420377 PLB1Q6P1J6 1458 aa6.68□□□□□ -1.34
PTPN22-202ENST00000420377 EIF5BO60841 1220 aaKnown RBP6.66□□□□□ -1.34
PTPN22-202ENST00000420377 ATF5Q9Y2D1 282 aaPredicted RBP6.66□□□□□ -1.34
PTPN22-202ENST00000420377 CHMP7Q8WUX9 453 aaPredicted RBP6.65□□□□□ -1.34
PTPN22-202ENST00000420377 BIVM-ERCC5R4GMW8 1640 aa6.65□□□□□ -1.34
PTPN22-202ENST00000420377 FGD5Q6ZNL6 1462 aa6.65□□□□□ -1.35
PTPN22-202ENST00000420377 DCAF8L1A6NGE4 600 aa6.64□□□□□ -1.35
PTPN22-202ENST00000420377 ILDR1Q86SU0 546 aaPredicted RBP6.64□□□□□ -1.35
PTPN22-202ENST00000420377 PLSCR2Q9NRY7 297 aa6.63□□□□□ -1.35
PTPN22-202ENST00000420377 MAP3K4Q9Y6R4 1608 aa6.62□□□□□ -1.35
PTPN22-202ENST00000420377 MAGI3Q5TCQ9 1506 aa6.61□□□□□ -1.35
PTPN22-202ENST00000420377 CUX1P39880 1505 aa6.6□□□□□ -1.35
PTPN22-202ENST00000420377 RUSC2Q8N2Y8 1516 aa6.6□□□□□ -1.35
PTPN22-202ENST00000420377 ATXN8OSP0DMR3 200 aa6.6□□□□□ -1.35
PTPN22-202ENST00000420377 FAM9AQ8IZU1 332 aaPredicted RBP6.6□□□□□ -1.35
PTPN22-202ENST00000420377 CUL7Q14999 1698 aa6.6□□□□□ -1.35
PTPN22-202ENST00000420377 NPM1P06748 294 aaKnown RBP eCLIP6.59□□□□□ -1.35
PTPN22-202ENST00000420377 PPRC1Q5VV67 1664 aaKnown RBP6.59□□□□□ -1.35
PTPN22-202ENST00000420377 HECW2Q9P2P5 1572 aa6.59□□□□□ -1.35
PTPN22-202ENST00000420377 KDM4FA0A1W2PPD8 638 aa6.59□□□□□ -1.35
PTPN22-202ENST00000420377 CFAP43Q8NDM7 1665 aa6.58□□□□□ -1.36
PTPN22-202ENST00000420377 WRNQ14191 1432 aaPredicted RBP eCLIP6.58□□□□□ -1.36
PTPN22-202ENST00000420377 ADGRL1O94910 1474 aa6.58□□□□□ -1.36
PTPN22-202ENST00000420377 ADCY10Q96PN6 1610 aa6.58□□□□□ -1.36
PTPN22-202ENST00000420377 ABCC2Q92887 1545 aa6.57□□□□□ -1.36
PTPN22-202ENST00000420377 ARAP3Q8WWN8 1544 aa6.56□□□□□ -1.36
PTPN22-202ENST00000420377 RAD54L2Q9Y4B4 1467 aa6.56□□□□□ -1.36
PTPN22-202ENST00000420377 KDM5BQ9UGL1 1544 aa6.55□□□□□ -1.36
PTPN22-202ENST00000420377 ADAMTSL3P82987 1691 aa6.54□□□□□ -1.36
PTPN22-202ENST00000420377 ARXQ96QS3 562 aa6.54□□□□□ -1.36
PTPN22-202ENST00000420377 PRG4Q92954 1404 aaPredicted RBP6.53□□□□□ -1.36
PTPN22-202ENST00000420377 TDRD9Q8NDG6 1382 aaKnown RBP6.53□□□□□ -1.36
PTPN22-202ENST00000420377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPN22-202ENST00000420377 CARMIL2Q6F5E8 1435 aa6.52□□□□□ -1.37
PTPN22-202ENST00000420377 SOCS7O14512 581 aa6.5□□□□□ -1.37
PTPN22-202ENST00000420377 TNIKQ9UKE5 1360 aa6.5□□□□□ -1.37
PTPN22-202ENST00000420377 EPRSP07814 1512 aaKnown RBP6.49□□□□□ -1.37
PTPN22-202ENST00000420377 HRCP23327 699 aa6.49□□□□□ -1.37
PTPN22-202ENST00000420377 UGGT2Q9NYU1 1516 aa6.49□□□□□ -1.37
PTPN22-202ENST00000420377 FAM69CQ0P6D2 419 aa6.48□□□□□ -1.37
PTPN22-202ENST00000420377 JPH4Q96JJ6 628 aa6.48□□□□□ -1.37
PTPN22-202ENST00000420377 U3KPZ7 1027 aaPredicted RBP6.48□□□□□ -1.37
PTPN22-202ENST00000420377 NEO1Q92859 1461 aa6.48□□□□□ -1.37
PTPN22-202ENST00000420377 CFAP74Q9C0B2 1584 aa6.48□□□□□ -1.37
PTPN22-202ENST00000420377 MAGI2Q86UL8 1455 aa6.47□□□□□ -1.37
PTPN22-202ENST00000420377 PTPRTO14522 1441 aa6.46□□□□□ -1.38
PTPN22-202ENST00000420377 PCF11O94913 1555 aaKnown RBP6.46□□□□□ -1.38
PTPN22-202ENST00000420377 FBLN2P98095 1184 aa6.46□□□□□ -1.38
PTPN22-202ENST00000420377 UACAQ9BZF9 1416 aa6.46□□□□□ -1.38
PTPN22-202ENST00000420377 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
PTPN22-202ENST00000420377 BCORL1Q5H9F3 1711 aa6.44□□□□□ -1.38
PTPN22-202ENST00000420377 ASXL2Q76L83 1435 aa6.44□□□□□ -1.38
PTPN22-202ENST00000420377 LMTK3Q96Q04 1460 aa6.43□□□□□ -1.38
PTPN22-202ENST00000420377 PTPRGP23470 1445 aa6.43□□□□□ -1.38
PTPN22-202ENST00000420377 CENPBP07199 599 aaPredicted RBP6.43□□□□□ -1.38
PTPN22-202ENST00000420377 ZMYM4Q5VZL5 1548 aa6.43□□□□□ -1.38
PTPN22-202ENST00000420377 REREQ9P2R6 1566 aa6.43□□□□□ -1.38
PTPN22-202ENST00000420377 GOLGA3Q08378 1498 aa6.43□□□□□ -1.38
PTPN22-202ENST00000420377 WDR7Q9Y4E6 1490 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms