RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
SHMT1P1-201ENST00000419974 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
SHMT1P1-201ENST00000419974 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
SHMT1P1-201ENST00000419974 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
SHMT1P1-201ENST00000419974 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
SHMT1P1-201ENST00000419974 GRIN2AQ12879 1464 aa22.91■■□□□ 1.26
SHMT1P1-201ENST00000419974 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
SHMT1P1-201ENST00000419974 CEP162Q5TB80 1403 aa22.88■■□□□ 1.25
SHMT1P1-201ENST00000419974 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.25
SHMT1P1-201ENST00000419974 NUP160Q12769 1436 aa22.83■■□□□ 1.25
SHMT1P1-201ENST00000419974 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
SHMT1P1-201ENST00000419974 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
SHMT1P1-201ENST00000419974 CLIP1P30622 1438 aa22.79■■□□□ 1.24
SHMT1P1-201ENST00000419974 CEP170Q5SW79 1584 aa22.75■■□□□ 1.23
SHMT1P1-201ENST00000419974 EFCAB5A4FU69 1503 aa22.73■■□□□ 1.23
SHMT1P1-201ENST00000419974 IQGAP2Q13576 1575 aa22.71■■□□□ 1.23
SHMT1P1-201ENST00000419974 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
SHMT1P1-201ENST00000419974 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
SHMT1P1-201ENST00000419974 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
SHMT1P1-201ENST00000419974 SAMD9Q5K651 1589 aa22.64■■□□□ 1.22
SHMT1P1-201ENST00000419974 JPH4Q96JJ6 628 aa22.6■■□□□ 1.21
SHMT1P1-201ENST00000419974 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
SHMT1P1-201ENST00000419974 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
SHMT1P1-201ENST00000419974 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
SHMT1P1-201ENST00000419974 DISP1Q96F81 1524 aa22.54■■□□□ 1.2
SHMT1P1-201ENST00000419974 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
SHMT1P1-201ENST00000419974 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
SHMT1P1-201ENST00000419974 CARMIL2Q6F5E8 1435 aa22.5■■□□□ 1.19
SHMT1P1-201ENST00000419974 KIAA0556O60303 1618 aa22.48■■□□□ 1.19
SHMT1P1-201ENST00000419974 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
SHMT1P1-201ENST00000419974 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
SHMT1P1-201ENST00000419974 CASKIN1Q8WXD9 1431 aa22.41■■□□□ 1.18
SHMT1P1-201ENST00000419974 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
SHMT1P1-201ENST00000419974 FYCO1Q9BQS8 1478 aa22.4■■□□□ 1.18
SHMT1P1-201ENST00000419974 P3H3Q8IVL6 736 aa22.36■■□□□ 1.17
SHMT1P1-201ENST00000419974 PCF11O94913 1555 aaKnown RBP22.29■■□□□ 1.16
SHMT1P1-201ENST00000419974 PTPRGP23470 1445 aa22.27■■□□□ 1.16
SHMT1P1-201ENST00000419974 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
SHMT1P1-201ENST00000419974 APLP2Q06481 763 aa22.26■■□□□ 1.15
SHMT1P1-201ENST00000419974 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
SHMT1P1-201ENST00000419974 ABCA8O94911 1581 aa22.23■■□□□ 1.15
SHMT1P1-201ENST00000419974 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
SHMT1P1-201ENST00000419974 ADCY10Q96PN6 1610 aa22.22■■□□□ 1.15
SHMT1P1-201ENST00000419974 TIAM1Q13009 1591 aa22.22■■□□□ 1.15
SHMT1P1-201ENST00000419974 MAPKBP1O60336 1514 aa22.21■■□□□ 1.15
SHMT1P1-201ENST00000419974 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.15
SHMT1P1-201ENST00000419974 NUP153P49790 1475 aaKnown RBP22.18■■□□□ 1.14
SHMT1P1-201ENST00000419974 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
SHMT1P1-201ENST00000419974 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
SHMT1P1-201ENST00000419974 CFAP43Q8NDM7 1665 aa22.17■■□□□ 1.14
SHMT1P1-201ENST00000419974 UACAQ9BZF9 1416 aa22.17■■□□□ 1.14
SHMT1P1-201ENST00000419974 UHRF1BP1LA0JNW5 1464 aa22.17■■□□□ 1.14
SHMT1P1-201ENST00000419974 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
SHMT1P1-201ENST00000419974 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.14
SHMT1P1-201ENST00000419974 KIF13AQ9H1H9 1805 aa22.14■■□□□ 1.13
SHMT1P1-201ENST00000419974 FAM69CQ0P6D2 419 aa22.1■■□□□ 1.13
SHMT1P1-201ENST00000419974 ABCC2Q92887 1545 aa22.1■■□□□ 1.13
SHMT1P1-201ENST00000419974 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
SHMT1P1-201ENST00000419974 LRRIQ1Q96JM4 1722 aa22.08■■□□□ 1.13
SHMT1P1-201ENST00000419974 TTBK1Q5TCY1 1321 aaPredicted RBP22.07■■□□□ 1.12
SHMT1P1-201ENST00000419974 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
SHMT1P1-201ENST00000419974 DIP2BQ9P265 1576 aa22.05■■□□□ 1.12
SHMT1P1-201ENST00000419974 ATP10BO94823 1461 aa22.05■■□□□ 1.12
SHMT1P1-201ENST00000419974 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
SHMT1P1-201ENST00000419974 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
SHMT1P1-201ENST00000419974 EHBP1L1Q8N3D4 1523 aa22.03■■□□□ 1.12
SHMT1P1-201ENST00000419974 TRIM26Q12899 539 aaPredicted RBP22.02■■□□□ 1.12
SHMT1P1-201ENST00000419974 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
SHMT1P1-201ENST00000419974 MTUS2Q5JR59 1369 aa22■■□□□ 1.11
SHMT1P1-201ENST00000419974 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
SHMT1P1-201ENST00000419974 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
SHMT1P1-201ENST00000419974 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
SHMT1P1-201ENST00000419974 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
SHMT1P1-201ENST00000419974 PLEKHD1A6NEE1 506 aa21.93■■□□□ 1.1
SHMT1P1-201ENST00000419974 GLI2P10070 1586 aa21.93■■□□□ 1.1
SHMT1P1-201ENST00000419974 RRBP1Q9P2E9 1410 aaKnown RBP21.92■■□□□ 1.1
SHMT1P1-201ENST00000419974 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
SHMT1P1-201ENST00000419974 NCOA2Q15596 1464 aa21.89■■□□□ 1.1
SHMT1P1-201ENST00000419974 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
SHMT1P1-201ENST00000419974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHMT1P1-201ENST00000419974 PHLDB1Q86UU1 1377 aa21.87■■□□□ 1.09
SHMT1P1-201ENST00000419974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
SHMT1P1-201ENST00000419974 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
SHMT1P1-201ENST00000419974 MIA2Q96PC5 1412 aa21.83■■□□□ 1.08
SHMT1P1-201ENST00000419974 MYOM3Q5VTT5 1437 aa21.82■■□□□ 1.08
SHMT1P1-201ENST00000419974 TSPOAP1O95153 1857 aa21.82■■□□□ 1.08
SHMT1P1-201ENST00000419974 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
SHMT1P1-201ENST00000419974 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
SHMT1P1-201ENST00000419974 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
SHMT1P1-201ENST00000419974 KIF14Q15058 1648 aa21.8■■□□□ 1.08
SHMT1P1-201ENST00000419974 KDM6BO15054 1643 aa21.78■■□□□ 1.08
SHMT1P1-201ENST00000419974 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
SHMT1P1-201ENST00000419974 MAP3K4Q9Y6R4 1608 aa21.77■■□□□ 1.08
SHMT1P1-201ENST00000419974 PPRC1Q5VV67 1664 aaKnown RBP21.76■■□□□ 1.07
SHMT1P1-201ENST00000419974 GPATCH8Q9UKJ3 1502 aaKnown RBP21.74■■□□□ 1.07
SHMT1P1-201ENST00000419974 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
SHMT1P1-201ENST00000419974 TCOF1Q13428 1488 aaKnown RBP21.73■■□□□ 1.07
SHMT1P1-201ENST00000419974 TEX14Q8IWB6 1497 aa21.73■■□□□ 1.07
SHMT1P1-201ENST00000419974 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
SHMT1P1-201ENST00000419974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms