RNA–Protein interactions for RNA: ENST00000419810.6

HPCAL1-203, Transcript of hippocalcin like 1, humanhuman

TSL 1 (best)

Gene HPCAL1, Length 4,781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCAL1-203ENST00000419810 ARXQ96QS3 562 aa17.77■□□□□ 0.44
HPCAL1-203ENST00000419810 RBM19Q9Y4C8 960 aaKnown RBP17.77■□□□□ 0.44
HPCAL1-203ENST00000419810 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
HPCAL1-203ENST00000419810 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
HPCAL1-203ENST00000419810 BECN1Q14457 450 aa17.72■□□□□ 0.43
HPCAL1-203ENST00000419810 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
HPCAL1-203ENST00000419810 ERICH6BQ5W0A0 696 aa17.68■□□□□ 0.42
HPCAL1-203ENST00000419810 TSHZ2Q9NRE2 1034 aa17.68■□□□□ 0.42
HPCAL1-203ENST00000419810 CCER2I3L3R5 266 aa17.68■□□□□ 0.42
HPCAL1-203ENST00000419810 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
HPCAL1-203ENST00000419810 SIN3AQ96ST3 1273 aa17.64■□□□□ 0.41
HPCAL1-203ENST00000419810 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
HPCAL1-203ENST00000419810 B4GALNT3Q6L9W6 998 aa17.64■□□□□ 0.41
HPCAL1-203ENST00000419810 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
HPCAL1-203ENST00000419810 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
HPCAL1-203ENST00000419810 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
HPCAL1-203ENST00000419810 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
HPCAL1-203ENST00000419810 TRIM44Q96DX7 344 aaPredicted RBP17.63■□□□□ 0.41
HPCAL1-203ENST00000419810 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
HPCAL1-203ENST00000419810 NACADO15069 1562 aa17.62■□□□□ 0.41
HPCAL1-203ENST00000419810 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
HPCAL1-203ENST00000419810 CCNB3Q8WWL7 1395 aa17.55■□□□□ 0.4
HPCAL1-203ENST00000419810 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
HPCAL1-203ENST00000419810 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
HPCAL1-203ENST00000419810 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
HPCAL1-203ENST00000419810 GOLGA6L22H0YM25 854 aa17.51■□□□□ 0.39
HPCAL1-203ENST00000419810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.399e-8■■■■□ 24.5
HPCAL1-203ENST00000419810 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
HPCAL1-203ENST00000419810 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
HPCAL1-203ENST00000419810 VPS8Q8N3P4 1428 aa17.45■□□□□ 0.38
HPCAL1-203ENST00000419810 KIF27Q86VH2 1401 aa17.45■□□□□ 0.38
HPCAL1-203ENST00000419810 SOGA1O94964 1423 aa17.45■□□□□ 0.38
HPCAL1-203ENST00000419810 MYH16Q9H6N6 1097 aa17.45■□□□□ 0.38
HPCAL1-203ENST00000419810 CARD11Q9BXL7 1154 aa17.43■□□□□ 0.38
HPCAL1-203ENST00000419810 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
HPCAL1-203ENST00000419810 RGS3P49796 1198 aa17.43■□□□□ 0.38
HPCAL1-203ENST00000419810 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
HPCAL1-203ENST00000419810 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
HPCAL1-203ENST00000419810 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
HPCAL1-203ENST00000419810 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
HPCAL1-203ENST00000419810 NCLP19338 710 aaKnown RBP17.38■□□□□ 0.37
HPCAL1-203ENST00000419810 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
HPCAL1-203ENST00000419810 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
HPCAL1-203ENST00000419810 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
HPCAL1-203ENST00000419810 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
HPCAL1-203ENST00000419810 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.37
HPCAL1-203ENST00000419810 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
HPCAL1-203ENST00000419810 PTMAP06454 111 aaKnown RBP17.33■□□□□ 0.36
HPCAL1-203ENST00000419810 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
HPCAL1-203ENST00000419810 FHAD1B1AJZ9 1412 aa17.32■□□□□ 0.36
HPCAL1-203ENST00000419810 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
HPCAL1-203ENST00000419810 KANK4Q5T7N3 995 aaPredicted RBP17.3■□□□□ 0.36
HPCAL1-203ENST00000419810 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
HPCAL1-203ENST00000419810 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
HPCAL1-203ENST00000419810 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
HPCAL1-203ENST00000419810 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
HPCAL1-203ENST00000419810 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
HPCAL1-203ENST00000419810 DNTTIP2Q5QJE6 756 aaKnown RBP17.28■□□□□ 0.36
HPCAL1-203ENST00000419810 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.36
HPCAL1-203ENST00000419810 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.35
HPCAL1-203ENST00000419810 FRAT1Q92837 279 aaPredicted RBP17.25■□□□□ 0.35
HPCAL1-203ENST00000419810 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
HPCAL1-203ENST00000419810 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
HPCAL1-203ENST00000419810 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
HPCAL1-203ENST00000419810 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
HPCAL1-203ENST00000419810 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
HPCAL1-203ENST00000419810 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
HPCAL1-203ENST00000419810 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
HPCAL1-203ENST00000419810 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
HPCAL1-203ENST00000419810 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
HPCAL1-203ENST00000419810 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
HPCAL1-203ENST00000419810 MS4A1P11836 297 aa17.21■□□□□ 0.35
HPCAL1-203ENST00000419810 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
HPCAL1-203ENST00000419810 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
HPCAL1-203ENST00000419810 HSCBQ8IWL3 235 aa17.2■□□□□ 0.34
HPCAL1-203ENST00000419810 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
HPCAL1-203ENST00000419810 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
HPCAL1-203ENST00000419810 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
HPCAL1-203ENST00000419810 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
HPCAL1-203ENST00000419810 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
HPCAL1-203ENST00000419810 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
HPCAL1-203ENST00000419810 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
HPCAL1-203ENST00000419810 MSNP26038 577 aaKnown RBP17.16■□□□□ 0.34
HPCAL1-203ENST00000419810 TMF1P82094 1093 aa17.16■□□□□ 0.34
HPCAL1-203ENST00000419810 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
HPCAL1-203ENST00000419810 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
HPCAL1-203ENST00000419810 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
HPCAL1-203ENST00000419810 RALBP1Q15311 655 aa17.13■□□□□ 0.33
HPCAL1-203ENST00000419810 DCAF11Q8TEB1 546 aa17.13■□□□□ 0.33
HPCAL1-203ENST00000419810 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
HPCAL1-203ENST00000419810 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
HPCAL1-203ENST00000419810 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
HPCAL1-203ENST00000419810 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
HPCAL1-203ENST00000419810 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
HPCAL1-203ENST00000419810 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
HPCAL1-203ENST00000419810 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
HPCAL1-203ENST00000419810 PTMSP20962 102 aa17.07■□□□□ 0.32
HPCAL1-203ENST00000419810 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
HPCAL1-203ENST00000419810 GBP4Q96PP9 640 aa17.06■□□□□ 0.32
HPCAL1-203ENST00000419810 GOLGA6L3A6NEY3 463 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms