RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 ERCC6L2Q5T890 1561 aa16.35■□□□□ 0.21
CTSA-205ENST00000419493 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
CTSA-205ENST00000419493 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
CTSA-205ENST00000419493 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
CTSA-205ENST00000419493 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
CTSA-205ENST00000419493 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
CTSA-205ENST00000419493 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTSA-205ENST00000419493 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
CTSA-205ENST00000419493 IQGAP2Q13576 1575 aa16.18■□□□□ 0.18
CTSA-205ENST00000419493 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
CTSA-205ENST00000419493 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
CTSA-205ENST00000419493 PTPRGP23470 1445 aa16.15■□□□□ 0.18
CTSA-205ENST00000419493 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
CTSA-205ENST00000419493 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
CTSA-205ENST00000419493 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
CTSA-205ENST00000419493 EEA1Q15075 1411 aa16.08■□□□□ 0.16
CTSA-205ENST00000419493 CTTNBP2Q8WZ74 1663 aa16.07■□□□□ 0.16
CTSA-205ENST00000419493 DISP1Q96F81 1524 aa16.06■□□□□ 0.16
CTSA-205ENST00000419493 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
CTSA-205ENST00000419493 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
CTSA-205ENST00000419493 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
CTSA-205ENST00000419493 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
CTSA-205ENST00000419493 P3H3Q8IVL6 736 aa16.02■□□□□ 0.16
CTSA-205ENST00000419493 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
CTSA-205ENST00000419493 GOLGA3Q08378 1498 aa16.02■□□□□ 0.15
CTSA-205ENST00000419493 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
CTSA-205ENST00000419493 UACAQ9BZF9 1416 aa16.01■□□□□ 0.15
CTSA-205ENST00000419493 MAPKBP1O60336 1514 aa15.98■□□□□ 0.15
CTSA-205ENST00000419493 ABCC2Q92887 1545 aa15.98■□□□□ 0.15
CTSA-205ENST00000419493 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
CTSA-205ENST00000419493 UBTFP17480 764 aaKnown RBP15.95■□□□□ 0.14
CTSA-205ENST00000419493 UHRF1BP1LA0JNW5 1464 aa15.95■□□□□ 0.14
CTSA-205ENST00000419493 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
CTSA-205ENST00000419493 ASXL2Q76L83 1435 aa15.92■□□□□ 0.14
CTSA-205ENST00000419493 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
CTSA-205ENST00000419493 DIP2BQ9P265 1576 aa15.9■□□□□ 0.14
CTSA-205ENST00000419493 KIF21BO75037 1637 aa15.9■□□□□ 0.14
CTSA-205ENST00000419493 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
CTSA-205ENST00000419493 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
CTSA-205ENST00000419493 ZCCHC11Q5TAX3 1644 aaKnown RBP15.86■□□□□ 0.13
CTSA-205ENST00000419493 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
CTSA-205ENST00000419493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
CTSA-205ENST00000419493 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
CTSA-205ENST00000419493 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
CTSA-205ENST00000419493 ABCA8O94911 1581 aa15.84■□□□□ 0.13
CTSA-205ENST00000419493 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
CTSA-205ENST00000419493 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
CTSA-205ENST00000419493 EPRSP07814 1512 aaKnown RBP15.79■□□□□ 0.12
CTSA-205ENST00000419493 WDR7Q9Y4E6 1490 aa15.79■□□□□ 0.12
CTSA-205ENST00000419493 GLI2P10070 1586 aa15.78■□□□□ 0.12
CTSA-205ENST00000419493 ATP1B4Q9UN42 357 aaPredicted RBP15.77■□□□□ 0.12
CTSA-205ENST00000419493 ATP10BO94823 1461 aa15.76■□□□□ 0.11
CTSA-205ENST00000419493 RAPGEF6Q8TEU7 1601 aa15.76■□□□□ 0.11
CTSA-205ENST00000419493 EFCAB5A4FU69 1503 aa15.75■□□□□ 0.11
CTSA-205ENST00000419493 KDM6BO15054 1643 aa15.73■□□□□ 0.11
CTSA-205ENST00000419493 TEX14Q8IWB6 1497 aa15.71■□□□□ 0.1
CTSA-205ENST00000419493 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
CTSA-205ENST00000419493 MAP3K4Q9Y6R4 1608 aa15.7■□□□□ 0.1
CTSA-205ENST00000419493 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
CTSA-205ENST00000419493 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
CTSA-205ENST00000419493 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
CTSA-205ENST00000419493 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
CTSA-205ENST00000419493 PPRC1Q5VV67 1664 aaKnown RBP15.67■□□□□ 0.1
CTSA-205ENST00000419493 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
CTSA-205ENST00000419493 CFAP43Q8NDM7 1665 aa15.64■□□□□ 0.09
CTSA-205ENST00000419493 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
CTSA-205ENST00000419493 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
CTSA-205ENST00000419493 CDK11AQ9UQ88 783 aaPredicted RBP15.6■□□□□ 0.09
CTSA-205ENST00000419493 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
CTSA-205ENST00000419493 CLIP1P30622 1438 aa15.58■□□□□ 0.08
CTSA-205ENST00000419493 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
CTSA-205ENST00000419493 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
CTSA-205ENST00000419493 PHLDB1Q86UU1 1377 aa15.52■□□□□ 0.08
CTSA-205ENST00000419493 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
CTSA-205ENST00000419493 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
CTSA-205ENST00000419493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
CTSA-205ENST00000419493 CASKIN1Q8WXD9 1431 aa15.5■□□□□ 0.07
CTSA-205ENST00000419493 ARAP3Q8WWN8 1544 aa15.49■□□□□ 0.07
CTSA-205ENST00000419493 NEO1Q92859 1461 aa15.49■□□□□ 0.07
CTSA-205ENST00000419493 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
CTSA-205ENST00000419493 PCF11O94913 1555 aaKnown RBP15.48■□□□□ 0.07
CTSA-205ENST00000419493 FANCAO15360 1455 aa15.46■□□□□ 0.07
CTSA-205ENST00000419493 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.07
CTSA-205ENST00000419493 TTC37Q6PGP7 1564 aa15.46■□□□□ 0.07
CTSA-205ENST00000419493 TROQ12816 1431 aaPredicted RBP15.46■□□□□ 0.07
CTSA-205ENST00000419493 AKNAQ7Z591 1439 aa15.46■□□□□ 0.07
CTSA-205ENST00000419493 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
CTSA-205ENST00000419493 LRRIQ1Q96JM4 1722 aa15.44■□□□□ 0.06
CTSA-205ENST00000419493 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
CTSA-205ENST00000419493 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
CTSA-205ENST00000419493 PLCH2O75038 1416 aa15.43■□□□□ 0.06
CTSA-205ENST00000419493 KIF14Q15058 1648 aa15.43■□□□□ 0.06
CTSA-205ENST00000419493 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
CTSA-205ENST00000419493 CFAP74Q9C0B2 1584 aa15.41■□□□□ 0.06
CTSA-205ENST00000419493 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
CTSA-205ENST00000419493 SCAPERQ9BY12 1400 aa15.39■□□□□ 0.05
CTSA-205ENST00000419493 ARID4BQ4LE39 1312 aaPredicted RBP15.39■□□□□ 0.05
CTSA-205ENST00000419493 MYO5CQ9NQX4 1742 aa15.38■□□□□ 0.05
CTSA-205ENST00000419493 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
CTSA-205ENST00000419493 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms