RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 PRXQ9BXM0 1461 aa29.55■■■□□ 2.32
EPCAM-203ENST00000419334 KIAA0586Q9BVV6 1533 aa29.54■■■□□ 2.32
EPCAM-203ENST00000419334 CSRNP3Q8WYN3 585 aa29.51■■■□□ 2.31
EPCAM-203ENST00000419334 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
EPCAM-203ENST00000419334 JPH4Q96JJ6 628 aa29.44■■■□□ 2.3
EPCAM-203ENST00000419334 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
EPCAM-203ENST00000419334 IQGAP2Q13576 1575 aa29.41■■■□□ 2.3
EPCAM-203ENST00000419334 PRG4Q92954 1404 aaPredicted RBP29.39■■■□□ 2.3
EPCAM-203ENST00000419334 CTTNBP2Q8WZ74 1663 aa29.38■■■□□ 2.29
EPCAM-203ENST00000419334 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
EPCAM-203ENST00000419334 CYB5RLQ6IPT4 315 aa29.34■■■□□ 2.29
EPCAM-203ENST00000419334 KIF21BO75037 1637 aa29.33■■■□□ 2.29
EPCAM-203ENST00000419334 UGGT2Q9NYU1 1516 aa29.25■■■□□ 2.27
EPCAM-203ENST00000419334 CARMIL2Q6F5E8 1435 aa29.2■■■□□ 2.27
EPCAM-203ENST00000419334 DISP1Q96F81 1524 aa29.17■■■□□ 2.26
EPCAM-203ENST00000419334 KIAA0556O60303 1618 aa29.13■■■□□ 2.25
EPCAM-203ENST00000419334 GOLGA3Q08378 1498 aa29.12■■■□□ 2.25
EPCAM-203ENST00000419334 TNIKQ9UKE5 1360 aa29.1■■■□□ 2.25
EPCAM-203ENST00000419334 PTPRGP23470 1445 aa29.04■■■□□ 2.24
EPCAM-203ENST00000419334 SAMD9Q5K651 1589 aa29■■■□□ 2.23
EPCAM-203ENST00000419334 UBTFP17480 764 aaKnown RBP28.97■■■□□ 2.23
EPCAM-203ENST00000419334 ADCY10Q96PN6 1610 aa28.97■■■□□ 2.23
EPCAM-203ENST00000419334 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
EPCAM-203ENST00000419334 TTBK1Q5TCY1 1321 aaPredicted RBP28.92■■■□□ 2.22
EPCAM-203ENST00000419334 EFCAB5A4FU69 1503 aa28.89■■■□□ 2.21
EPCAM-203ENST00000419334 UHRF1BP1LA0JNW5 1464 aa28.88■■■□□ 2.21
EPCAM-203ENST00000419334 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
EPCAM-203ENST00000419334 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
EPCAM-203ENST00000419334 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
EPCAM-203ENST00000419334 P3H3Q8IVL6 736 aa28.82■■■□□ 2.2
EPCAM-203ENST00000419334 ABCA8O94911 1581 aa28.8■■■□□ 2.2
EPCAM-203ENST00000419334 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
EPCAM-203ENST00000419334 PLB1Q6P1J6 1458 aa28.78■■■□□ 2.2
EPCAM-203ENST00000419334 MAPKBP1O60336 1514 aa28.77■■■□□ 2.2
EPCAM-203ENST00000419334 FHOD3Q2V2M9 1422 aa28.77■■■□□ 2.2
EPCAM-203ENST00000419334 ARHGAP35Q9NRY4 1499 aa28.73■■■□□ 2.19
EPCAM-203ENST00000419334 KDM5BQ9UGL1 1544 aa28.73■■■□□ 2.19
EPCAM-203ENST00000419334 TRHP20396 242 aaPredicted RBP28.69■■■□□ 2.18
EPCAM-203ENST00000419334 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
EPCAM-203ENST00000419334 RAPGEF6Q8TEU7 1601 aa28.68■■■□□ 2.18
EPCAM-203ENST00000419334 KIF13AQ9H1H9 1805 aa28.62■■■□□ 2.17
EPCAM-203ENST00000419334 ABCC10Q5T3U5 1492 aa28.59■■■□□ 2.17
EPCAM-203ENST00000419334 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
EPCAM-203ENST00000419334 ASXL2Q76L83 1435 aa28.59■■■□□ 2.17
EPCAM-203ENST00000419334 CLIP1P30622 1438 aa28.58■■■□□ 2.17
EPCAM-203ENST00000419334 DIP2BQ9P265 1576 aa28.58■■■□□ 2.17
EPCAM-203ENST00000419334 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
EPCAM-203ENST00000419334 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
EPCAM-203ENST00000419334 ATP10BO94823 1461 aa28.53■■■□□ 2.16
EPCAM-203ENST00000419334 CEP162Q5TB80 1403 aa28.49■■■□□ 2.15
EPCAM-203ENST00000419334 WDR7Q9Y4E6 1490 aa28.48■■■□□ 2.15
EPCAM-203ENST00000419334 FAM69CQ0P6D2 419 aa28.47■■■□□ 2.15
EPCAM-203ENST00000419334 HECW1Q76N89 1606 aa28.47■■■□□ 2.15
EPCAM-203ENST00000419334 GLI2P10070 1586 aa28.45■■■□□ 2.15
EPCAM-203ENST00000419334 EPRSP07814 1512 aaKnown RBP28.44■■■□□ 2.14
EPCAM-203ENST00000419334 ARID3CA6NKF2 412 aa28.44■■■□□ 2.14
EPCAM-203ENST00000419334 PCF11O94913 1555 aaKnown RBP28.4■■■□□ 2.14
EPCAM-203ENST00000419334 CASKIN1Q8WXD9 1431 aa28.38■■■□□ 2.13
EPCAM-203ENST00000419334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.36■■■□□ 2.13
EPCAM-203ENST00000419334 HNRNPUL2Q1KMD3 747 aaKnown RBP28.36■■■□□ 2.13
EPCAM-203ENST00000419334 CDK13Q14004 1512 aaKnown RBP28.35■■■□□ 2.13
EPCAM-203ENST00000419334 LRRIQ1Q96JM4 1722 aa28.35■■■□□ 2.13
EPCAM-203ENST00000419334 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
EPCAM-203ENST00000419334 MAP3K4Q9Y6R4 1608 aa28.33■■■□□ 2.13
EPCAM-203ENST00000419334 TSPOAP1O95153 1857 aa28.32■■■□□ 2.12
EPCAM-203ENST00000419334 ATP1B4Q9UN42 357 aaPredicted RBP28.32■■■□□ 2.12
EPCAM-203ENST00000419334 CFAP43Q8NDM7 1665 aa28.29■■■□□ 2.12
EPCAM-203ENST00000419334 KCNH8Q96L42 1107 aa28.28■■■□□ 2.12
EPCAM-203ENST00000419334 PPRC1Q5VV67 1664 aaKnown RBP28.27■■■□□ 2.12
EPCAM-203ENST00000419334 PLEKHD1A6NEE1 506 aa28.27■■■□□ 2.12
EPCAM-203ENST00000419334 CCDC18Q5T9S5 1454 aa28.27■■■□□ 2.12
EPCAM-203ENST00000419334 ABCA9Q8IUA7 1624 aa28.24■■■□□ 2.11
EPCAM-203ENST00000419334 CDK11AQ9UQ88 783 aaPredicted RBP28.19■■■□□ 2.1
EPCAM-203ENST00000419334 CD109Q6YHK3 1445 aa28.18■■■□□ 2.1
EPCAM-203ENST00000419334 TEX14Q8IWB6 1497 aa28.16■■■□□ 2.1
EPCAM-203ENST00000419334 MAGI3Q5TCQ9 1506 aa28.16■■■□□ 2.1
EPCAM-203ENST00000419334 VPS8Q8N3P4 1428 aa28.16■■■□□ 2.1
EPCAM-203ENST00000419334 TROQ12816 1431 aaPredicted RBP28.14■■■□□ 2.1
EPCAM-203ENST00000419334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.13■■■□□ 2.095e-7■□□□□ 8.9
EPCAM-203ENST00000419334 TTC37Q6PGP7 1564 aa28.09■■■□□ 2.09
EPCAM-203ENST00000419334 KIF14Q15058 1648 aa28.09■■■□□ 2.09
EPCAM-203ENST00000419334 KDM6BO15054 1643 aa28.07■■■□□ 2.08
EPCAM-203ENST00000419334 MYO5CQ9NQX4 1742 aa27.99■■■□□ 2.07
EPCAM-203ENST00000419334 TIAM1Q13009 1591 aa27.98■■■□□ 2.07
EPCAM-203ENST00000419334 NEO1Q92859 1461 aa27.97■■■□□ 2.07
EPCAM-203ENST00000419334 PHLDB1Q86UU1 1377 aa27.96■■■□□ 2.07
EPCAM-203ENST00000419334 CFAP74Q9C0B2 1584 aa27.95■■■□□ 2.07
EPCAM-203ENST00000419334 EHBP1L1Q8N3D4 1523 aa27.95■■■□□ 2.06
EPCAM-203ENST00000419334 ARAP3Q8WWN8 1544 aa27.95■■■□□ 2.06
EPCAM-203ENST00000419334 PLCH2O75038 1416 aa27.94■■■□□ 2.06
EPCAM-203ENST00000419334 MTUS2Q5JR59 1369 aa27.94■■■□□ 2.06
EPCAM-203ENST00000419334 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
EPCAM-203ENST00000419334 MAP3K1Q13233 1512 aa27.93■■■□□ 2.06
EPCAM-203ENST00000419334 FANCAO15360 1455 aa27.92■■■□□ 2.06
EPCAM-203ENST00000419334 PREX2Q70Z35 1606 aa27.88■■■□□ 2.05
EPCAM-203ENST00000419334 CDC42BPBQ9Y5S2 1711 aa27.87■■■□□ 2.05
EPCAM-203ENST00000419334 CDC42BPAQ5VT25 1732 aa27.87■■■□□ 2.05
EPCAM-203ENST00000419334 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
EPCAM-203ENST00000419334 LRRC9Q6ZRR7 1453 aa27.83■■■□□ 2.05
EPCAM-203ENST00000419334 ARHGAP5Q13017 1502 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms