RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
SYNGAP1-202ENST00000418600 KDM2AQ9Y2K7 1162 aa23.34■■□□□ 1.33
SYNGAP1-202ENST00000418600 CLIP1P30622 1438 aa23.34■■□□□ 1.33
SYNGAP1-202ENST00000418600 LMOD2Q6P5Q4 547 aa23.33■■□□□ 1.32
SYNGAP1-202ENST00000418600 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
SYNGAP1-202ENST00000418600 BCL11AQ9H165 835 aa23.3■■□□□ 1.32
SYNGAP1-202ENST00000418600 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
SYNGAP1-202ENST00000418600 TONSLQ96HA7 1378 aa23.28■■□□□ 1.32
SYNGAP1-202ENST00000418600 KANK1Q14678 1352 aa23.28■■□□□ 1.32
SYNGAP1-202ENST00000418600 EEA1Q15075 1411 aa23.27■■□□□ 1.32
SYNGAP1-202ENST00000418600 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
SYNGAP1-202ENST00000418600 ANP32CO43423 234 aa23.25■■□□□ 1.31
SYNGAP1-202ENST00000418600 RRP7BPQ9NSQ0 103 aa23.25■■□□□ 1.31
SYNGAP1-202ENST00000418600 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
SYNGAP1-202ENST00000418600 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
SYNGAP1-202ENST00000418600 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
SYNGAP1-202ENST00000418600 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
SYNGAP1-202ENST00000418600 POGKQ9P215 609 aa23.14■■□□□ 1.3
SYNGAP1-202ENST00000418600 GGT6Q6P531 493 aa23.14■■□□□ 1.29
SYNGAP1-202ENST00000418600 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
SYNGAP1-202ENST00000418600 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
SYNGAP1-202ENST00000418600 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
SYNGAP1-202ENST00000418600 ATAD2BQ9ULI0 1458 aa23.1■■□□□ 1.29
SYNGAP1-202ENST00000418600 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
SYNGAP1-202ENST00000418600 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
SYNGAP1-202ENST00000418600 TMC1Q8TDI8 760 aa23.08■■□□□ 1.29
SYNGAP1-202ENST00000418600 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
SYNGAP1-202ENST00000418600 EFCAB2Q5VUJ9 269 aa23.04■■□□□ 1.28
SYNGAP1-202ENST00000418600 ARXQ96QS3 562 aa23.01■■□□□ 1.27
SYNGAP1-202ENST00000418600 NPHP1O15259 732 aa23.01■■□□□ 1.27
SYNGAP1-202ENST00000418600 HRCP23327 699 aa23.01■■□□□ 1.27
SYNGAP1-202ENST00000418600 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
SYNGAP1-202ENST00000418600 RTL5Q5HYW3 569 aaPredicted RBP22.99■■□□□ 1.27
SYNGAP1-202ENST00000418600 FHAD1B1AJZ9 1412 aa22.98■■□□□ 1.27
SYNGAP1-202ENST00000418600 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
SYNGAP1-202ENST00000418600 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
SYNGAP1-202ENST00000418600 EID1Q9Y6B2 187 aa22.97■■□□□ 1.27
SYNGAP1-202ENST00000418600 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
SYNGAP1-202ENST00000418600 CCDC9Q9Y3X0 531 aaKnown RBP22.93■■□□□ 1.26
SYNGAP1-202ENST00000418600 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.259e-6■■■□□ 15.6
SYNGAP1-202ENST00000418600 WIZO95785 1651 aa22.87■■□□□ 1.25
SYNGAP1-202ENST00000418600 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
SYNGAP1-202ENST00000418600 PPM1GO15355 546 aaPredicted RBP22.84■■□□□ 1.25
SYNGAP1-202ENST00000418600 PTPRGP23470 1445 aa22.84■■□□□ 1.25
SYNGAP1-202ENST00000418600 MEX3CQ5U5Q3 659 aaKnown RBP22.83■■□□□ 1.24
SYNGAP1-202ENST00000418600 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
SYNGAP1-202ENST00000418600 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
SYNGAP1-202ENST00000418600 DIEXFQ68CQ4 756 aaKnown RBP22.78■■□□□ 1.24
SYNGAP1-202ENST00000418600 SPAG9O60271 1321 aaKnown RBP22.75■■□□□ 1.23
SYNGAP1-202ENST00000418600 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
SYNGAP1-202ENST00000418600 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
SYNGAP1-202ENST00000418600 PAK3O75914 559 aaPredicted RBP22.74■■□□□ 1.23
SYNGAP1-202ENST00000418600 KIF3BO15066 747 aa22.73■■□□□ 1.23
SYNGAP1-202ENST00000418600 CFAP53Q96M91 514 aa22.73■■□□□ 1.23
SYNGAP1-202ENST00000418600 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
SYNGAP1-202ENST00000418600 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
SYNGAP1-202ENST00000418600 TNIKQ9UKE5 1360 aa22.7■■□□□ 1.22
SYNGAP1-202ENST00000418600 STK26Q9P289 416 aa22.7■■□□□ 1.22
SYNGAP1-202ENST00000418600 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
SYNGAP1-202ENST00000418600 SRPK2P78362 688 aaKnown RBP22.68■■□□□ 1.22
SYNGAP1-202ENST00000418600 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
SYNGAP1-202ENST00000418600 SOX12O15370 315 aa22.66■■□□□ 1.22
SYNGAP1-202ENST00000418600 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
SYNGAP1-202ENST00000418600 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
SYNGAP1-202ENST00000418600 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
SYNGAP1-202ENST00000418600 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
SYNGAP1-202ENST00000418600 HNRNPMP52272 730 aaKnown RBP eCLIP22.62■■□□□ 1.21
SYNGAP1-202ENST00000418600 KNSTRNQ9Y448 316 aa22.6■■□□□ 1.21
SYNGAP1-202ENST00000418600 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.212e-6■■■■■ 32.4
SYNGAP1-202ENST00000418600 SALL2Q9Y467 1007 aaPredicted RBP22.59■■□□□ 1.21
SYNGAP1-202ENST00000418600 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
SYNGAP1-202ENST00000418600 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.21e-7■■■■■ 32.2
SYNGAP1-202ENST00000418600 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
SYNGAP1-202ENST00000418600 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
SYNGAP1-202ENST00000418600 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
SYNGAP1-202ENST00000418600 ANKRD30AQ9BXX3 1397 aa22.54■■□□□ 1.2
SYNGAP1-202ENST00000418600 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
SYNGAP1-202ENST00000418600 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
SYNGAP1-202ENST00000418600 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
SYNGAP1-202ENST00000418600 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
SYNGAP1-202ENST00000418600 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
SYNGAP1-202ENST00000418600 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
SYNGAP1-202ENST00000418600 DCAF11Q8TEB1 546 aa22.5■■□□□ 1.19
SYNGAP1-202ENST00000418600 MAPK8IP3Q9UPT6 1336 aa22.5■■□□□ 1.19
SYNGAP1-202ENST00000418600 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
SYNGAP1-202ENST00000418600 DCAF8L1A6NGE4 600 aa22.49■■□□□ 1.19
SYNGAP1-202ENST00000418600 NESP48681 1621 aa22.48■■□□□ 1.19
SYNGAP1-202ENST00000418600 TMX4Q9H1E5 349 aaPredicted RBP22.48■■□□□ 1.19
SYNGAP1-202ENST00000418600 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
SYNGAP1-202ENST00000418600 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
SYNGAP1-202ENST00000418600 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
SYNGAP1-202ENST00000418600 TNNT2P45379 298 aaPredicted RBP22.44■■□□□ 1.18
SYNGAP1-202ENST00000418600 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
SYNGAP1-202ENST00000418600 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
SYNGAP1-202ENST00000418600 LAS1LQ9Y4W2 734 aaKnown RBP22.42■■□□□ 1.18
SYNGAP1-202ENST00000418600 DDX10Q13206 875 aaKnown RBP22.41■■□□□ 1.18
SYNGAP1-202ENST00000418600 NUP155O75694 1391 aa22.39■■□□□ 1.17
SYNGAP1-202ENST00000418600 PKD2Q13563 968 aa22.39■■□□□ 1.17
SYNGAP1-202ENST00000418600 PNNQ9H307 717 aaKnown RBP22.39■■□□□ 1.17
SYNGAP1-202ENST00000418600 EVA1CP58658 441 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms