RNA–Protein interactions for RNA: ENST00000418194.6

SP3-203, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-203ENST00000418194 B4GALNT3Q6L9W6 998 aa24.07■■□□□ 1.44
SP3-203ENST00000418194 SLC4A1APQ9BWU0 796 aaKnown RBP24.04■■□□□ 1.44
SP3-203ENST00000418194 BCL11AQ9H165 835 aa24.04■■□□□ 1.44
SP3-203ENST00000418194 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
SP3-203ENST00000418194 NACADO15069 1562 aa24.04■■□□□ 1.44
SP3-203ENST00000418194 CCDC136Q96JN2 1154 aa24.02■■□□□ 1.44
SP3-203ENST00000418194 DHX57Q6P158 1386 aaKnown RBP24.01■■□□□ 1.43
SP3-203ENST00000418194 ANP32AP39687 249 aaKnown RBP24.01■■□□□ 1.43
SP3-203ENST00000418194 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
SP3-203ENST00000418194 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
SP3-203ENST00000418194 KDM2AQ9Y2K7 1162 aa23.97■■□□□ 1.43
SP3-203ENST00000418194 FOXD1Q16676 465 aa23.94■■□□□ 1.42
SP3-203ENST00000418194 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
SP3-203ENST00000418194 EIF4G2P78344 907 aaKnown RBP eCLIP23.93■■□□□ 1.42
SP3-203ENST00000418194 TMC1Q8TDI8 760 aa23.89■■□□□ 1.41
SP3-203ENST00000418194 KIF27Q86VH2 1401 aa23.86■■□□□ 1.41
SP3-203ENST00000418194 RTN4Q9NQC3 1192 aaKnown RBP23.81■■□□□ 1.4
SP3-203ENST00000418194 ZBTB47Q9UFB7 747 aaPredicted RBP23.8■■□□□ 1.4
SP3-203ENST00000418194 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
SP3-203ENST00000418194 SETD5Q9C0A6 1442 aa23.75■■□□□ 1.39
SP3-203ENST00000418194 PPP1R15AO75807 674 aaPredicted RBP23.75■■□□□ 1.39
SP3-203ENST00000418194 HSPA5P11021 654 aaKnown RBP23.74■■□□□ 1.39
SP3-203ENST00000418194 EIF5BO60841 1220 aaKnown RBP23.73■■□□□ 1.39
SP3-203ENST00000418194 ARXQ96QS3 562 aa23.72■■□□□ 1.39
SP3-203ENST00000418194 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.39
SP3-203ENST00000418194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.7■■□□□ 1.387e-13■■□□□ 12.4
SP3-203ENST00000418194 CUX2O14529 1486 aa23.7■■□□□ 1.38
SP3-203ENST00000418194 PPP4R2Q9NY27 417 aa23.68■■□□□ 1.38
SP3-203ENST00000418194 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
SP3-203ENST00000418194 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
SP3-203ENST00000418194 CCER2I3L3R5 266 aa23.64■■□□□ 1.37
SP3-203ENST00000418194 DEKP35659 375 aaKnown RBP23.6■■□□□ 1.37
SP3-203ENST00000418194 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
SP3-203ENST00000418194 CANXP27824 592 aaKnown RBP23.58■■□□□ 1.37
SP3-203ENST00000418194 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
SP3-203ENST00000418194 NOP58Q9Y2X3 529 aaKnown RBP23.55■■□□□ 1.36
SP3-203ENST00000418194 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
SP3-203ENST00000418194 FHOD3Q2V2M9 1422 aa23.51■■□□□ 1.35
SP3-203ENST00000418194 L3MBTL2Q969R5 705 aa23.5■■□□□ 1.35
SP3-203ENST00000418194 KIF21BO75037 1637 aa23.49■■□□□ 1.35
SP3-203ENST00000418194 CARD11Q9BXL7 1154 aa23.46■■□□□ 1.35
SP3-203ENST00000418194 NEFMP07197 916 aa23.41■■□□□ 1.34
SP3-203ENST00000418194 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
SP3-203ENST00000418194 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
SP3-203ENST00000418194 PHLDB1Q86UU1 1377 aa23.41■■□□□ 1.34
SP3-203ENST00000418194 TIMELESSQ9UNS1 1208 aa23.4■■□□□ 1.34
SP3-203ENST00000418194 ARHGAP35Q9NRY4 1499 aa23.4■■□□□ 1.34
SP3-203ENST00000418194 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
SP3-203ENST00000418194 MPHOSPH9Q99550 1183 aa23.39■■□□□ 1.33
SP3-203ENST00000418194 RGS3P49796 1198 aa23.38■■□□□ 1.33
SP3-203ENST00000418194 CCDC184Q52MB2 194 aa23.38■■□□□ 1.33
SP3-203ENST00000418194 CFDP1Q9UEE9 299 aaPredicted RBP23.37■■□□□ 1.33
SP3-203ENST00000418194 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
SP3-203ENST00000418194 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
SP3-203ENST00000418194 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
SP3-203ENST00000418194 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
SP3-203ENST00000418194 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
SP3-203ENST00000418194 CHGAP10645 457 aaKnown RBP23.34■■□□□ 1.33
SP3-203ENST00000418194 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
SP3-203ENST00000418194 WDR43Q15061 677 aaKnown RBP eCLIP23.29■■□□□ 1.32
SP3-203ENST00000418194 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
SP3-203ENST00000418194 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
SP3-203ENST00000418194 PKD2Q13563 968 aa23.25■■□□□ 1.31
SP3-203ENST00000418194 MSH5O43196 834 aa23.24■■□□□ 1.31
SP3-203ENST00000418194 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.24■■□□□ 1.31
SP3-203ENST00000418194 EIF4G1Q04637 1599 aaKnown RBP23.24■■□□□ 1.31
SP3-203ENST00000418194 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
SP3-203ENST00000418194 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
SP3-203ENST00000418194 PLIN1O60240 522 aa23.2■■□□□ 1.3
SP3-203ENST00000418194 IGF1RP08069 1367 aa23.2■■□□□ 1.3
SP3-203ENST00000418194 SLC4A3P48751 1232 aa23.19■■□□□ 1.3
SP3-203ENST00000418194 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
SP3-203ENST00000418194 TNNT2P45379 298 aaPredicted RBP23.18■■□□□ 1.3
SP3-203ENST00000418194 PAK3O75914 559 aaPredicted RBP23.15■■□□□ 1.3
SP3-203ENST00000418194 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
SP3-203ENST00000418194 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
SP3-203ENST00000418194 EXOC6Q8TAG9 804 aa23.12■■□□□ 1.29
SP3-203ENST00000418194 RCAN3Q9UKA8 241 aa23.12■■□□□ 1.29
SP3-203ENST00000418194 FMN1Q68DA7 1419 aa23.12■■□□□ 1.29
SP3-203ENST00000418194 RRBP1Q9P2E9 1410 aaKnown RBP23.12■■□□□ 1.29
SP3-203ENST00000418194 ZNF644Q9H582 1327 aaPredicted RBP23.1■■□□□ 1.29
SP3-203ENST00000418194 IPO9Q96P70 1041 aaKnown RBP23.1■■□□□ 1.29
SP3-203ENST00000418194 PLEKHD1A6NEE1 506 aa23.1■■□□□ 1.29
SP3-203ENST00000418194 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
SP3-203ENST00000418194 FANCIQ9NVI1 1328 aa23.07■■□□□ 1.28
SP3-203ENST00000418194 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
SP3-203ENST00000418194 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
SP3-203ENST00000418194 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
SP3-203ENST00000418194 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
SP3-203ENST00000418194 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
SP3-203ENST00000418194 KIF7Q2M1P5 1343 aa23.02■■□□□ 1.28
SP3-203ENST00000418194 HSP90AA1P07900 732 aaKnown RBP23.02■■□□□ 1.28
SP3-203ENST00000418194 C11orf95C9JLR9 678 aaPredicted RBP23.02■■□□□ 1.27
SP3-203ENST00000418194 UPF2Q9HAU5 1272 aaKnown RBP23.02■■□□□ 1.27
SP3-203ENST00000418194 ZBED9Q6R2W3 1325 aa23.01■■□□□ 1.27
SP3-203ENST00000418194 SLC24A1O60721 1099 aa22.99■■□□□ 1.27
SP3-203ENST00000418194 PRXQ9BXM0 1461 aa22.99■■□□□ 1.27
SP3-203ENST00000418194 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
SP3-203ENST00000418194 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
SP3-203ENST00000418194 PPM1GO15355 546 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms