RNA–Protein interactions for RNA: ENST00000417903.5

NDUFA3-205, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-205ENST00000417903 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
NDUFA3-205ENST00000417903 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
NDUFA3-205ENST00000417903 RAPGEF2Q9Y4G8 1499 aa25.47■■□□□ 1.67
NDUFA3-205ENST00000417903 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
NDUFA3-205ENST00000417903 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
NDUFA3-205ENST00000417903 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
NDUFA3-205ENST00000417903 EEA1Q15075 1411 aa25.35■■□□□ 1.65
NDUFA3-205ENST00000417903 PRXQ9BXM0 1461 aa25.34■■□□□ 1.65
NDUFA3-205ENST00000417903 CARMIL2Q6F5E8 1435 aa25.28■■□□□ 1.64
NDUFA3-205ENST00000417903 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
NDUFA3-205ENST00000417903 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
NDUFA3-205ENST00000417903 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
NDUFA3-205ENST00000417903 PTPRGP23470 1445 aa25.2■■□□□ 1.63
NDUFA3-205ENST00000417903 TNIKQ9UKE5 1360 aa25.19■■□□□ 1.62
NDUFA3-205ENST00000417903 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
NDUFA3-205ENST00000417903 NPM1P06748 294 aaKnown RBP eCLIP25.16■■□□□ 1.62
NDUFA3-205ENST00000417903 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
NDUFA3-205ENST00000417903 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
NDUFA3-205ENST00000417903 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
NDUFA3-205ENST00000417903 CTTNBP2Q8WZ74 1663 aa25.06■■□□□ 1.6
NDUFA3-205ENST00000417903 KIAA0556O60303 1618 aa25■■□□□ 1.59
NDUFA3-205ENST00000417903 ADCY10Q96PN6 1610 aa24.99■■□□□ 1.59
NDUFA3-205ENST00000417903 UACAQ9BZF9 1416 aa24.99■■□□□ 1.59
NDUFA3-205ENST00000417903 KIF21BO75037 1637 aa24.98■■□□□ 1.59
NDUFA3-205ENST00000417903 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
NDUFA3-205ENST00000417903 UBTFP17480 764 aaKnown RBP24.95■■□□□ 1.58
NDUFA3-205ENST00000417903 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
NDUFA3-205ENST00000417903 ABCC2Q92887 1545 aa24.92■■□□□ 1.58
NDUFA3-205ENST00000417903 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
NDUFA3-205ENST00000417903 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
NDUFA3-205ENST00000417903 MAPKBP1O60336 1514 aa24.9■■□□□ 1.58
NDUFA3-205ENST00000417903 FAM69CQ0P6D2 419 aa24.87■■□□□ 1.57
NDUFA3-205ENST00000417903 ABCC10Q5T3U5 1492 aa24.84■■□□□ 1.57
NDUFA3-205ENST00000417903 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.57
NDUFA3-205ENST00000417903 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
NDUFA3-205ENST00000417903 SAMD9Q5K651 1589 aa24.8■■□□□ 1.56
NDUFA3-205ENST00000417903 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
NDUFA3-205ENST00000417903 ABCA8O94911 1581 aa24.77■■□□□ 1.56
NDUFA3-205ENST00000417903 EFCAB5A4FU69 1503 aa24.73■■□□□ 1.55
NDUFA3-205ENST00000417903 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
NDUFA3-205ENST00000417903 DIP2BQ9P265 1576 aa24.7■■□□□ 1.54
NDUFA3-205ENST00000417903 KIF13AQ9H1H9 1805 aa24.69■■□□□ 1.54
NDUFA3-205ENST00000417903 ZCCHC11Q5TAX3 1644 aaKnown RBP24.68■■□□□ 1.54
NDUFA3-205ENST00000417903 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
NDUFA3-205ENST00000417903 ATP10BO94823 1461 aa24.64■■□□□ 1.53
NDUFA3-205ENST00000417903 WDR7Q9Y4E6 1490 aa24.63■■□□□ 1.53
NDUFA3-205ENST00000417903 EPRSP07814 1512 aaKnown RBP24.62■■□□□ 1.53
NDUFA3-205ENST00000417903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.61■■□□□ 1.53
NDUFA3-205ENST00000417903 HNRNPUL2Q1KMD3 747 aaKnown RBP24.61■■□□□ 1.53
NDUFA3-205ENST00000417903 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
NDUFA3-205ENST00000417903 GLI2P10070 1586 aa24.61■■□□□ 1.53
NDUFA3-205ENST00000417903 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
NDUFA3-205ENST00000417903 RAPGEF6Q8TEU7 1601 aa24.6■■□□□ 1.53
NDUFA3-205ENST00000417903 FMN1Q68DA7 1419 aa24.58■■□□□ 1.53
NDUFA3-205ENST00000417903 NUP153P49790 1475 aaKnown RBP24.56■■□□□ 1.52
NDUFA3-205ENST00000417903 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
NDUFA3-205ENST00000417903 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
NDUFA3-205ENST00000417903 CLIP1P30622 1438 aa24.47■■□□□ 1.51
NDUFA3-205ENST00000417903 CD109Q6YHK3 1445 aa24.46■■□□□ 1.51
NDUFA3-205ENST00000417903 TSPOAP1O95153 1857 aa24.45■■□□□ 1.5
NDUFA3-205ENST00000417903 TEX14Q8IWB6 1497 aa24.44■■□□□ 1.5
NDUFA3-205ENST00000417903 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
NDUFA3-205ENST00000417903 CDK11AQ9UQ88 783 aaPredicted RBP24.42■■□□□ 1.5
NDUFA3-205ENST00000417903 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
NDUFA3-205ENST00000417903 MAGI3Q5TCQ9 1506 aa24.39■■□□□ 1.49
NDUFA3-205ENST00000417903 PPRC1Q5VV67 1664 aaKnown RBP24.36■■□□□ 1.49
NDUFA3-205ENST00000417903 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
NDUFA3-205ENST00000417903 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
NDUFA3-205ENST00000417903 CFAP43Q8NDM7 1665 aa24.35■■□□□ 1.49
NDUFA3-205ENST00000417903 KDM6BO15054 1643 aa24.35■■□□□ 1.49
NDUFA3-205ENST00000417903 CDK13Q14004 1512 aaKnown RBP24.34■■□□□ 1.49
NDUFA3-205ENST00000417903 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
NDUFA3-205ENST00000417903 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
NDUFA3-205ENST00000417903 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
NDUFA3-205ENST00000417903 COL17A1Q9UMD9 1497 aaPredicted RBP24.27■■□□□ 1.48
NDUFA3-205ENST00000417903 CCDC18Q5T9S5 1454 aa24.25■■□□□ 1.47
NDUFA3-205ENST00000417903 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
NDUFA3-205ENST00000417903 TROQ12816 1431 aaPredicted RBP24.22■■□□□ 1.47
NDUFA3-205ENST00000417903 PCF11O94913 1555 aaKnown RBP24.21■■□□□ 1.47
NDUFA3-205ENST00000417903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.46
NDUFA3-205ENST00000417903 NEO1Q92859 1461 aa24.19■■□□□ 1.46
NDUFA3-205ENST00000417903 ARAP3Q8WWN8 1544 aa24.19■■□□□ 1.46
NDUFA3-205ENST00000417903 PLCH2O75038 1416 aa24.15■■□□□ 1.46
NDUFA3-205ENST00000417903 EFCAB2Q5VUJ9 269 aa24.13■■□□□ 1.45
NDUFA3-205ENST00000417903 FANCAO15360 1455 aa24.12■■□□□ 1.45
NDUFA3-205ENST00000417903 LRRIQ1Q96JM4 1722 aa24.11■■□□□ 1.45
NDUFA3-205ENST00000417903 TTC37Q6PGP7 1564 aa24.11■■□□□ 1.45
NDUFA3-205ENST00000417903 AKNAQ7Z591 1439 aa24.1■■□□□ 1.45
NDUFA3-205ENST00000417903 RAPGEF3O95398 923 aa24.1■■□□□ 1.45
NDUFA3-205ENST00000417903 KIF14Q15058 1648 aa24.09■■□□□ 1.45
NDUFA3-205ENST00000417903 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
NDUFA3-205ENST00000417903 DENND4BO75064 1496 aaPredicted RBP24.04■■□□□ 1.44
NDUFA3-205ENST00000417903 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
NDUFA3-205ENST00000417903 VPS8Q8N3P4 1428 aa24.03■■□□□ 1.44
NDUFA3-205ENST00000417903 CFAP74Q9C0B2 1584 aa24.03■■□□□ 1.44
NDUFA3-205ENST00000417903 SCAPERQ9BY12 1400 aa23.99■■□□□ 1.43
NDUFA3-205ENST00000417903 ADGRL1O94910 1474 aa23.98■■□□□ 1.43
NDUFA3-205ENST00000417903 ARHGAP5Q13017 1502 aa23.97■■□□□ 1.43
NDUFA3-205ENST00000417903 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
NDUFA3-205ENST00000417903 KDM4FA0A1W2PPD8 638 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms