RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 SNAPC4Q5SXM2 1469 aa10.95□□□□□ -0.66
ABCA13-202ENST00000417403 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
ABCA13-202ENST00000417403 LRRIQ1Q96JM4 1722 aa10.94□□□□□ -0.66
ABCA13-202ENST00000417403 FHAD1B1AJZ9 1412 aa10.94□□□□□ -0.66
ABCA13-202ENST00000417403 MAGI1Q96QZ7 1491 aaPredicted RBP10.93□□□□□ -0.66
ABCA13-202ENST00000417403 CHD1O14646 1710 aa10.92□□□□□ -0.66
ABCA13-202ENST00000417403 GRIN2AQ12879 1464 aa10.9□□□□□ -0.66
ABCA13-202ENST00000417403 CLIP1P30622 1438 aa10.89□□□□□ -0.67
ABCA13-202ENST00000417403 SYNJ2O15056 1496 aa10.89□□□□□ -0.67
ABCA13-202ENST00000417403 NUP160Q12769 1436 aa10.88□□□□□ -0.67
ABCA13-202ENST00000417403 IQGAP2Q13576 1575 aa10.86□□□□□ -0.67
ABCA13-202ENST00000417403 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
ABCA13-202ENST00000417403 UGGT2Q9NYU1 1516 aa10.86□□□□□ -0.67
ABCA13-202ENST00000417403 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
ABCA13-202ENST00000417403 VPS8Q8N3P4 1428 aa10.85□□□□□ -0.67
ABCA13-202ENST00000417403 DISP1Q96F81 1524 aa10.84□□□□□ -0.67
ABCA13-202ENST00000417403 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
ABCA13-202ENST00000417403 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
ABCA13-202ENST00000417403 KIAA0556O60303 1618 aa10.82□□□□□ -0.68
ABCA13-202ENST00000417403 UBTFP17480 764 aaKnown RBP10.81□□□□□ -0.68
ABCA13-202ENST00000417403 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
ABCA13-202ENST00000417403 KIAA0586Q9BVV6 1533 aa10.81□□□□□ -0.68
ABCA13-202ENST00000417403 MAP3K1Q13233 1512 aa10.76□□□□□ -0.69
ABCA13-202ENST00000417403 FHOD3Q2V2M9 1422 aa10.76□□□□□ -0.69
ABCA13-202ENST00000417403 TIAM1Q13009 1591 aa10.75□□□□□ -0.69
ABCA13-202ENST00000417403 ERCC6L2Q5T890 1561 aa10.74□□□□□ -0.69
ABCA13-202ENST00000417403 KCNA4P22459 653 aa10.72□□□□□ -0.69
ABCA13-202ENST00000417403 FYCO1Q9BQS8 1478 aa10.72□□□□□ -0.69
ABCA13-202ENST00000417403 MAGI3Q5TCQ9 1506 aa10.72□□□□□ -0.69
ABCA13-202ENST00000417403 CASKIN1Q8WXD9 1431 aa10.71□□□□□ -0.69
ABCA13-202ENST00000417403 ABCA8O94911 1581 aa10.68□□□□□ -0.7
ABCA13-202ENST00000417403 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
ABCA13-202ENST00000417403 RAPGEF6Q8TEU7 1601 aa10.67□□□□□ -0.7
ABCA13-202ENST00000417403 NUP153P49790 1475 aaKnown RBP10.66□□□□□ -0.7
ABCA13-202ENST00000417403 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
ABCA13-202ENST00000417403 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
ABCA13-202ENST00000417403 HECW1Q76N89 1606 aa10.65□□□□□ -0.71
ABCA13-202ENST00000417403 FMN1Q68DA7 1419 aa10.64□□□□□ -0.71
ABCA13-202ENST00000417403 RANGAP1P46060 587 aaPredicted RBP10.63□□□□□ -0.71
ABCA13-202ENST00000417403 CHMP7Q8WUX9 453 aaPredicted RBP10.63□□□□□ -0.71
ABCA13-202ENST00000417403 EPRSP07814 1512 aaKnown RBP10.62□□□□□ -0.71
ABCA13-202ENST00000417403 CDK13Q14004 1512 aaKnown RBP10.61□□□□□ -0.71
ABCA13-202ENST00000417403 PLB1Q6P1J6 1458 aa10.61□□□□□ -0.71
ABCA13-202ENST00000417403 ADCY10Q96PN6 1610 aa10.61□□□□□ -0.71
ABCA13-202ENST00000417403 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
ABCA13-202ENST00000417403 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
ABCA13-202ENST00000417403 PRG4Q92954 1404 aaPredicted RBP10.59□□□□□ -0.71
ABCA13-202ENST00000417403 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
ABCA13-202ENST00000417403 RRBP1Q9P2E9 1410 aaKnown RBP10.59□□□□□ -0.71
ABCA13-202ENST00000417403 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
ABCA13-202ENST00000417403 TRIM26Q12899 539 aaPredicted RBP10.56□□□□□ -0.72
ABCA13-202ENST00000417403 NCBP3Q53F19 620 aaKnown RBP10.56□□□□□ -0.72
ABCA13-202ENST00000417403 PHLDB1Q86UU1 1377 aa10.55□□□□□ -0.72
ABCA13-202ENST00000417403 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
ABCA13-202ENST00000417403 KIF14Q15058 1648 aa10.55□□□□□ -0.72
ABCA13-202ENST00000417403 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
ABCA13-202ENST00000417403 FBLN2P98095 1184 aa10.54□□□□□ -0.72
ABCA13-202ENST00000417403 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
ABCA13-202ENST00000417403 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
ABCA13-202ENST00000417403 ATP10BO94823 1461 aa10.52□□□□□ -0.72
ABCA13-202ENST00000417403 ABCC2Q92887 1545 aa10.52□□□□□ -0.72
ABCA13-202ENST00000417403 ZCCHC11Q5TAX3 1644 aaKnown RBP10.52□□□□□ -0.72
ABCA13-202ENST00000417403 UHRF1BP1LA0JNW5 1464 aa10.52□□□□□ -0.73
ABCA13-202ENST00000417403 CDC42BPAQ5VT25 1732 aa10.51□□□□□ -0.73
ABCA13-202ENST00000417403 CARMIL2Q6F5E8 1435 aa10.51□□□□□ -0.73
ABCA13-202ENST00000417403 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
ABCA13-202ENST00000417403 NCOA2Q15596 1464 aa10.5□□□□□ -0.73
ABCA13-202ENST00000417403 KDM5BQ9UGL1 1544 aa10.49□□□□□ -0.73
ABCA13-202ENST00000417403 ABCC10Q5T3U5 1492 aa10.49□□□□□ -0.73
ABCA13-202ENST00000417403 CDC42BPBQ9Y5S2 1711 aa10.48□□□□□ -0.73
ABCA13-202ENST00000417403 TCOF1Q13428 1488 aaKnown RBP10.48□□□□□ -0.73
ABCA13-202ENST00000417403 PRKCSHP14314 528 aaPredicted RBP10.47□□□□□ -0.73
ABCA13-202ENST00000417403 UACAQ9BZF9 1416 aa10.47□□□□□ -0.73
ABCA13-202ENST00000417403 PTPN23Q9H3S7 1636 aa10.46□□□□□ -0.74
ABCA13-202ENST00000417403 TTC37Q6PGP7 1564 aa10.45□□□□□ -0.74
ABCA13-202ENST00000417403 PTPRGP23470 1445 aa10.45□□□□□ -0.74
ABCA13-202ENST00000417403 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
ABCA13-202ENST00000417403 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
ABCA13-202ENST00000417403 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
ABCA13-202ENST00000417403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
ABCA13-202ENST00000417403 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
ABCA13-202ENST00000417403 PTPRKQ15262 1439 aa10.44□□□□□ -0.74
ABCA13-202ENST00000417403 FGD6Q6ZV73 1430 aa10.44□□□□□ -0.74
ABCA13-202ENST00000417403 TROQ12816 1431 aaPredicted RBP10.43□□□□□ -0.74
ABCA13-202ENST00000417403 PREX2Q70Z35 1606 aa10.43□□□□□ -0.74
ABCA13-202ENST00000417403 MYOM3Q5VTT5 1437 aa10.43□□□□□ -0.74
ABCA13-202ENST00000417403 TTBK1Q5TCY1 1321 aaPredicted RBP10.42□□□□□ -0.74
ABCA13-202ENST00000417403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.42□□□□□ -0.74
ABCA13-202ENST00000417403 ITSN2Q9NZM3 1697 aa10.42□□□□□ -0.74
ABCA13-202ENST00000417403 CCNB3Q8WWL7 1395 aa10.42□□□□□ -0.74
ABCA13-202ENST00000417403 GPATCH8Q9UKJ3 1502 aaKnown RBP10.41□□□□□ -0.74
ABCA13-202ENST00000417403 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.75
ABCA13-202ENST00000417403 OSCARQ8IYS5 282 aa10.38□□□□□ -0.75
ABCA13-202ENST00000417403 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
ABCA13-202ENST00000417403 GCC2Q8IWJ2 1684 aa10.38□□□□□ -0.75
ABCA13-202ENST00000417403 MTUS2Q5JR59 1369 aa10.38□□□□□ -0.75
ABCA13-202ENST00000417403 KDM6BO15054 1643 aa10.38□□□□□ -0.75
ABCA13-202ENST00000417403 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
ABCA13-202ENST00000417403 MYO5CQ9NQX4 1742 aa10.37□□□□□ -0.75
ABCA13-202ENST00000417403 ABCA9Q8IUA7 1624 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms