RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 CEP170Q5SW79 1584 aa19.56■□□□□ 0.72
GABRE-202ENST00000417300 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
GABRE-202ENST00000417300 DIP2BQ9P265 1576 aa19.49■□□□□ 0.71
GABRE-202ENST00000417300 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
GABRE-202ENST00000417300 TSPOAP1O95153 1857 aa19.45■□□□□ 0.7
GABRE-202ENST00000417300 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
GABRE-202ENST00000417300 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
GABRE-202ENST00000417300 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
GABRE-202ENST00000417300 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
GABRE-202ENST00000417300 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
GABRE-202ENST00000417300 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
GABRE-202ENST00000417300 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
GABRE-202ENST00000417300 NUP160Q12769 1436 aa19.4■□□□□ 0.7
GABRE-202ENST00000417300 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
GABRE-202ENST00000417300 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
GABRE-202ENST00000417300 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
GABRE-202ENST00000417300 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
GABRE-202ENST00000417300 KIF21BO75037 1637 aa19.33■□□□□ 0.69
GABRE-202ENST00000417300 LOC105371045A0A1W2PR82 267 aa19.31■□□□□ 0.68
GABRE-202ENST00000417300 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
GABRE-202ENST00000417300 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
GABRE-202ENST00000417300 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
GABRE-202ENST00000417300 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
GABRE-202ENST00000417300 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
GABRE-202ENST00000417300 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
GABRE-202ENST00000417300 IGF1RP08069 1367 aa19.22■□□□□ 0.67
GABRE-202ENST00000417300 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
GABRE-202ENST00000417300 CUL7Q14999 1698 aa19.19■□□□□ 0.66
GABRE-202ENST00000417300 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
GABRE-202ENST00000417300 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
GABRE-202ENST00000417300 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
GABRE-202ENST00000417300 COL17A1Q9UMD9 1497 aaPredicted RBP19.15■□□□□ 0.66
GABRE-202ENST00000417300 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
GABRE-202ENST00000417300 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
GABRE-202ENST00000417300 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
GABRE-202ENST00000417300 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
GABRE-202ENST00000417300 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
GABRE-202ENST00000417300 GLI2P10070 1586 aa19.05■□□□□ 0.64
GABRE-202ENST00000417300 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
GABRE-202ENST00000417300 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
GABRE-202ENST00000417300 ASXL2Q76L83 1435 aa19.01■□□□□ 0.63
GABRE-202ENST00000417300 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
GABRE-202ENST00000417300 SPATA31D1Q6ZQQ2 1576 aa18.96■□□□□ 0.63
GABRE-202ENST00000417300 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
GABRE-202ENST00000417300 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
GABRE-202ENST00000417300 ABCC2Q92887 1545 aa18.93■□□□□ 0.62
GABRE-202ENST00000417300 PTPRGP23470 1445 aa18.92■□□□□ 0.62
GABRE-202ENST00000417300 CLIP1P30622 1438 aa18.91■□□□□ 0.62
GABRE-202ENST00000417300 PTPRMP28827 1452 aa18.9■□□□□ 0.62
GABRE-202ENST00000417300 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.62
GABRE-202ENST00000417300 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
GABRE-202ENST00000417300 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
GABRE-202ENST00000417300 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
GABRE-202ENST00000417300 HSPA2P54652 639 aa18.8■□□□□ 0.6
GABRE-202ENST00000417300 ARHGAP35Q9NRY4 1499 aa18.79■□□□□ 0.6
GABRE-202ENST00000417300 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
GABRE-202ENST00000417300 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
GABRE-202ENST00000417300 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
GABRE-202ENST00000417300 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
GABRE-202ENST00000417300 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
GABRE-202ENST00000417300 UHRF1BP1LA0JNW5 1464 aa18.74■□□□□ 0.59
GABRE-202ENST00000417300 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
GABRE-202ENST00000417300 UACAQ9BZF9 1416 aa18.71■□□□□ 0.59
GABRE-202ENST00000417300 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
GABRE-202ENST00000417300 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
GABRE-202ENST00000417300 CD109Q6YHK3 1445 aa18.67■□□□□ 0.58
GABRE-202ENST00000417300 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
GABRE-202ENST00000417300 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
GABRE-202ENST00000417300 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
GABRE-202ENST00000417300 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
GABRE-202ENST00000417300 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
GABRE-202ENST00000417300 FHOD3Q2V2M9 1422 aa18.61■□□□□ 0.57
GABRE-202ENST00000417300 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
GABRE-202ENST00000417300 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
GABRE-202ENST00000417300 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
GABRE-202ENST00000417300 ZCCHC11Q5TAX3 1644 aaKnown RBP18.6■□□□□ 0.57
GABRE-202ENST00000417300 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
GABRE-202ENST00000417300 DISP1Q96F81 1524 aa18.58■□□□□ 0.56
GABRE-202ENST00000417300 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
GABRE-202ENST00000417300 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
GABRE-202ENST00000417300 ARAP3Q8WWN8 1544 aa18.55■□□□□ 0.56
GABRE-202ENST00000417300 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
GABRE-202ENST00000417300 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
GABRE-202ENST00000417300 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.56
GABRE-202ENST00000417300 RIMS1Q86UR5 1692 aaKnown RBP18.52■□□□□ 0.56
GABRE-202ENST00000417300 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
GABRE-202ENST00000417300 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
GABRE-202ENST00000417300 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
GABRE-202ENST00000417300 APLP2Q06481 763 aa18.46■□□□□ 0.55
GABRE-202ENST00000417300 YEATS2Q9ULM3 1422 aa18.46■□□□□ 0.55
GABRE-202ENST00000417300 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
GABRE-202ENST00000417300 PHLDB1Q86UU1 1377 aa18.43■□□□□ 0.54
GABRE-202ENST00000417300 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
GABRE-202ENST00000417300 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
GABRE-202ENST00000417300 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
GABRE-202ENST00000417300 POGZQ7Z3K3 1410 aa18.37■□□□□ 0.53
GABRE-202ENST00000417300 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
GABRE-202ENST00000417300 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
GABRE-202ENST00000417300 IQSEC2Q5JU85 1478 aa18.36■□□□□ 0.53
GABRE-202ENST00000417300 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms