RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 IGF1RP08069 1367 aa25.21■■□□□ 1.63
PAF1-202ENST00000416728 CUL7Q14999 1698 aa25.13■■□□□ 1.61
PAF1-202ENST00000416728 KIAA0586Q9BVV6 1533 aa25.13■■□□□ 1.61
PAF1-202ENST00000416728 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
PAF1-202ENST00000416728 NPM1P06748 294 aaKnown RBP eCLIP25.05■■□□□ 1.6
PAF1-202ENST00000416728 ADCY10Q96PN6 1610 aa24.96■■□□□ 1.59
PAF1-202ENST00000416728 MAPKBP1O60336 1514 aa24.95■■□□□ 1.58
PAF1-202ENST00000416728 ABCC10Q5T3U5 1492 aa24.94■■□□□ 1.58
PAF1-202ENST00000416728 FAM69CQ0P6D2 419 aa24.94■■□□□ 1.58
PAF1-202ENST00000416728 KIF13AQ9H1H9 1805 aa24.94■■□□□ 1.58
PAF1-202ENST00000416728 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
PAF1-202ENST00000416728 PTPRGP23470 1445 aa24.91■■□□□ 1.58
PAF1-202ENST00000416728 CARMIL2Q6F5E8 1435 aa24.9■■□□□ 1.58
PAF1-202ENST00000416728 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
PAF1-202ENST00000416728 TNIKQ9UKE5 1360 aa24.87■■□□□ 1.57
PAF1-202ENST00000416728 IQGAP2Q13576 1575 aa24.86■■□□□ 1.57
PAF1-202ENST00000416728 DIP2BQ9P265 1576 aa24.85■■□□□ 1.57
PAF1-202ENST00000416728 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
PAF1-202ENST00000416728 ABCC2Q92887 1545 aa24.76■■□□□ 1.55
PAF1-202ENST00000416728 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
PAF1-202ENST00000416728 UGGT2Q9NYU1 1516 aa24.72■■□□□ 1.55
PAF1-202ENST00000416728 UHRF1BP1LA0JNW5 1464 aa24.71■■□□□ 1.55
PAF1-202ENST00000416728 UACAQ9BZF9 1416 aa24.71■■□□□ 1.55
PAF1-202ENST00000416728 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
PAF1-202ENST00000416728 PLB1Q6P1J6 1458 aa24.67■■□□□ 1.54
PAF1-202ENST00000416728 KDM6BO15054 1643 aa24.64■■□□□ 1.54
PAF1-202ENST00000416728 KIAA0556O60303 1618 aa24.63■■□□□ 1.53
PAF1-202ENST00000416728 TSPOAP1O95153 1857 aa24.61■■□□□ 1.53
PAF1-202ENST00000416728 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
PAF1-202ENST00000416728 GLI2P10070 1586 aa24.58■■□□□ 1.52
PAF1-202ENST00000416728 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
PAF1-202ENST00000416728 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
PAF1-202ENST00000416728 CTTNBP2Q8WZ74 1663 aa24.53■■□□□ 1.52
PAF1-202ENST00000416728 EPRSP07814 1512 aaKnown RBP24.52■■□□□ 1.52
PAF1-202ENST00000416728 ZCCHC11Q5TAX3 1644 aaKnown RBP24.5■■□□□ 1.51
PAF1-202ENST00000416728 PPRC1Q5VV67 1664 aaKnown RBP24.46■■□□□ 1.51
PAF1-202ENST00000416728 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
PAF1-202ENST00000416728 MAP3K4Q9Y6R4 1608 aa24.42■■□□□ 1.5
PAF1-202ENST00000416728 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
PAF1-202ENST00000416728 KDM4FA0A1W2PPD8 638 aa24.42■■□□□ 1.5
PAF1-202ENST00000416728 ABCA8O94911 1581 aa24.41■■□□□ 1.5
PAF1-202ENST00000416728 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.49
PAF1-202ENST00000416728 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
PAF1-202ENST00000416728 COL17A1Q9UMD9 1497 aaPredicted RBP24.36■■□□□ 1.49
PAF1-202ENST00000416728 P3H3Q8IVL6 736 aa24.33■■□□□ 1.49
PAF1-202ENST00000416728 KCNH8Q96L42 1107 aa24.33■■□□□ 1.49
PAF1-202ENST00000416728 CD109Q6YHK3 1445 aa24.3■■□□□ 1.48
PAF1-202ENST00000416728 EEA1Q15075 1411 aa24.29■■□□□ 1.48
PAF1-202ENST00000416728 ARID3CA6NKF2 412 aa24.27■■□□□ 1.48
PAF1-202ENST00000416728 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
PAF1-202ENST00000416728 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
PAF1-202ENST00000416728 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
PAF1-202ENST00000416728 ATP10BO94823 1461 aa24.22■■□□□ 1.47
PAF1-202ENST00000416728 ADGRL1O94910 1474 aa24.22■■□□□ 1.47
PAF1-202ENST00000416728 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
PAF1-202ENST00000416728 RAPGEF6Q8TEU7 1601 aa24.14■■□□□ 1.45
PAF1-202ENST00000416728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
PAF1-202ENST00000416728 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
PAF1-202ENST00000416728 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
PAF1-202ENST00000416728 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
PAF1-202ENST00000416728 ABCA9Q8IUA7 1624 aa24.07■■□□□ 1.44
PAF1-202ENST00000416728 ARAP3Q8WWN8 1544 aa24.07■■□□□ 1.44
PAF1-202ENST00000416728 KIF21BO75037 1637 aa24.05■■□□□ 1.44
PAF1-202ENST00000416728 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
PAF1-202ENST00000416728 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
PAF1-202ENST00000416728 NEO1Q92859 1461 aa23.99■■□□□ 1.43
PAF1-202ENST00000416728 PLEKHD1A6NEE1 506 aa23.99■■□□□ 1.43
PAF1-202ENST00000416728 RAPGEF3O95398 923 aa23.95■■□□□ 1.42
PAF1-202ENST00000416728 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
PAF1-202ENST00000416728 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
PAF1-202ENST00000416728 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
PAF1-202ENST00000416728 HECW2Q9P2P5 1572 aa23.87■■□□□ 1.41
PAF1-202ENST00000416728 FRMPD1Q5SYB0 1578 aa23.85■■□□□ 1.41
PAF1-202ENST00000416728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.85■■□□□ 1.41
PAF1-202ENST00000416728 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
PAF1-202ENST00000416728 FANCAO15360 1455 aa23.84■■□□□ 1.41
PAF1-202ENST00000416728 DENND4BO75064 1496 aaPredicted RBP23.83■■□□□ 1.41
PAF1-202ENST00000416728 FMN1Q68DA7 1419 aa23.83■■□□□ 1.41
PAF1-202ENST00000416728 AKNAQ7Z591 1439 aa23.83■■□□□ 1.41
PAF1-202ENST00000416728 ATP1B4Q9UN42 357 aaPredicted RBP23.81■■□□□ 1.4
PAF1-202ENST00000416728 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
PAF1-202ENST00000416728 TTC37Q6PGP7 1564 aa23.8■■□□□ 1.4
PAF1-202ENST00000416728 CFAP74Q9C0B2 1584 aa23.8■■□□□ 1.4
PAF1-202ENST00000416728 ARID4BQ4LE39 1312 aaPredicted RBP23.79■■□□□ 1.4
PAF1-202ENST00000416728 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
PAF1-202ENST00000416728 ARHGEF40Q8TER5 1519 aa23.75■■□□□ 1.39
PAF1-202ENST00000416728 ADAMTSL3P82987 1691 aa23.74■■□□□ 1.39
PAF1-202ENST00000416728 PTPRMP28827 1452 aa23.74■■□□□ 1.39
PAF1-202ENST00000416728 CDK11AQ9UQ88 783 aaPredicted RBP23.74■■□□□ 1.39
PAF1-202ENST00000416728 RICTORQ6R327 1708 aa23.73■■□□□ 1.39
PAF1-202ENST00000416728 PLCH2O75038 1416 aa23.72■■□□□ 1.39
PAF1-202ENST00000416728 BCORL1Q5H9F3 1711 aa23.69■■□□□ 1.38
PAF1-202ENST00000416728 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
PAF1-202ENST00000416728 ILDR1Q86SU0 546 aaPredicted RBP23.67■■□□□ 1.38
PAF1-202ENST00000416728 SCAPERQ9BY12 1400 aa23.67■■□□□ 1.38
PAF1-202ENST00000416728 MAGI2Q86UL8 1455 aa23.66■■□□□ 1.38
PAF1-202ENST00000416728 ZFYVE16Q7Z3T8 1539 aa23.66■■□□□ 1.38
PAF1-202ENST00000416728 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
PAF1-202ENST00000416728 POGZQ7Z3K3 1410 aa23.65■■□□□ 1.38
PAF1-202ENST00000416728 YEATS2Q9ULM3 1422 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms