RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 WDR62O43379 1518 aa20.53■□□□□ 0.88
PTPN6-203ENST00000416215 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
PTPN6-203ENST00000416215 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.87
PTPN6-203ENST00000416215 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
PTPN6-203ENST00000416215 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
PTPN6-203ENST00000416215 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
PTPN6-203ENST00000416215 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
PTPN6-203ENST00000416215 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
PTPN6-203ENST00000416215 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
PTPN6-203ENST00000416215 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
PTPN6-203ENST00000416215 GRIN2BQ13224 1484 aa20.42■□□□□ 0.86
PTPN6-203ENST00000416215 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
PTPN6-203ENST00000416215 TIAM1Q13009 1591 aa20.4■□□□□ 0.86
PTPN6-203ENST00000416215 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.85
PTPN6-203ENST00000416215 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PTPN6-203ENST00000416215 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
PTPN6-203ENST00000416215 SAMD9Q5K651 1589 aa20.33■□□□□ 0.85
PTPN6-203ENST00000416215 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
PTPN6-203ENST00000416215 CASKIN1Q8WXD9 1431 aa20.32■□□□□ 0.84
PTPN6-203ENST00000416215 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
PTPN6-203ENST00000416215 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
PTPN6-203ENST00000416215 FMN1Q68DA7 1419 aa20.31■□□□□ 0.84
PTPN6-203ENST00000416215 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
PTPN6-203ENST00000416215 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
PTPN6-203ENST00000416215 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
PTPN6-203ENST00000416215 CFAP43Q8NDM7 1665 aa20.27■□□□□ 0.84
PTPN6-203ENST00000416215 IQGAP2Q13576 1575 aa20.26■□□□□ 0.83
PTPN6-203ENST00000416215 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
PTPN6-203ENST00000416215 ITGAEP38570 1179 aa20.22■□□□□ 0.83
PTPN6-203ENST00000416215 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
PTPN6-203ENST00000416215 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
PTPN6-203ENST00000416215 FBLN2P98095 1184 aa20.18■□□□□ 0.82
PTPN6-203ENST00000416215 LRRIQ1Q96JM4 1722 aa20.17■□□□□ 0.82
PTPN6-203ENST00000416215 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
PTPN6-203ENST00000416215 KIAA0586Q9BVV6 1533 aa20.16■□□□□ 0.82
PTPN6-203ENST00000416215 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
PTPN6-203ENST00000416215 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
PTPN6-203ENST00000416215 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
PTPN6-203ENST00000416215 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
PTPN6-203ENST00000416215 DISP1Q96F81 1524 aa20.08■□□□□ 0.81
PTPN6-203ENST00000416215 CEP170Q5SW79 1584 aa20.08■□□□□ 0.81
PTPN6-203ENST00000416215 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
PTPN6-203ENST00000416215 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
PTPN6-203ENST00000416215 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
PTPN6-203ENST00000416215 HECW1Q76N89 1606 aa20.03■□□□□ 0.8
PTPN6-203ENST00000416215 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.8
PTPN6-203ENST00000416215 CCDC18Q5T9S5 1454 aa20.02■□□□□ 0.79
PTPN6-203ENST00000416215 EPRSP07814 1512 aaKnown RBP20.01■□□□□ 0.79
PTPN6-203ENST00000416215 NUP160Q12769 1436 aa20.01■□□□□ 0.79
PTPN6-203ENST00000416215 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
PTPN6-203ENST00000416215 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
PTPN6-203ENST00000416215 CDK13Q14004 1512 aaKnown RBP20■□□□□ 0.79
PTPN6-203ENST00000416215 JPH4Q96JJ6 628 aa20■□□□□ 0.79
PTPN6-203ENST00000416215 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
PTPN6-203ENST00000416215 EHBP1L1Q8N3D4 1523 aa19.98■□□□□ 0.79
PTPN6-203ENST00000416215 SUPT6HQ7KZ85 1726 aaKnown RBP19.97■□□□□ 0.79
PTPN6-203ENST00000416215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.95■□□□□ 0.78
PTPN6-203ENST00000416215 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
PTPN6-203ENST00000416215 MYOM3Q5VTT5 1437 aa19.94■□□□□ 0.78
PTPN6-203ENST00000416215 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
PTPN6-203ENST00000416215 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
PTPN6-203ENST00000416215 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
PTPN6-203ENST00000416215 RAPGEF6Q8TEU7 1601 aa19.9■□□□□ 0.78
PTPN6-203ENST00000416215 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.78
PTPN6-203ENST00000416215 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
PTPN6-203ENST00000416215 PTPRKQ15262 1439 aa19.87■□□□□ 0.77
PTPN6-203ENST00000416215 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
PTPN6-203ENST00000416215 CHD1O14646 1710 aa19.83■□□□□ 0.76
PTPN6-203ENST00000416215 ZNF316A6NFI3 1004 aaPredicted RBP19.82■□□□□ 0.76
PTPN6-203ENST00000416215 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
PTPN6-203ENST00000416215 PRG4Q92954 1404 aaPredicted RBP19.79■□□□□ 0.76
PTPN6-203ENST00000416215 MAPKBP1O60336 1514 aa19.79■□□□□ 0.76
PTPN6-203ENST00000416215 TCOF1Q13428 1488 aaKnown RBP19.77■□□□□ 0.76
PTPN6-203ENST00000416215 DIEXFQ68CQ4 756 aaKnown RBP19.76■□□□□ 0.75
PTPN6-203ENST00000416215 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
PTPN6-203ENST00000416215 CHIC2Q9UKJ5 165 aa19.75■□□□□ 0.75
PTPN6-203ENST00000416215 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
PTPN6-203ENST00000416215 TROQ12816 1431 aaPredicted RBP19.73■□□□□ 0.75
PTPN6-203ENST00000416215 ABCA8O94911 1581 aa19.73■□□□□ 0.75
PTPN6-203ENST00000416215 NAIPQ13075 1403 aa19.73■□□□□ 0.75
PTPN6-203ENST00000416215 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
PTPN6-203ENST00000416215 PTPRGP23470 1445 aa19.71■□□□□ 0.75
PTPN6-203ENST00000416215 ZNF644Q9H582 1327 aaPredicted RBP19.71■□□□□ 0.75
PTPN6-203ENST00000416215 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
PTPN6-203ENST00000416215 ATP10BO94823 1461 aa19.69■□□□□ 0.74
PTPN6-203ENST00000416215 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
PTPN6-203ENST00000416215 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
PTPN6-203ENST00000416215 KIF14Q15058 1648 aa19.66■□□□□ 0.74
PTPN6-203ENST00000416215 SHROOM2Q13796 1616 aa19.64■□□□□ 0.74
PTPN6-203ENST00000416215 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
PTPN6-203ENST00000416215 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
PTPN6-203ENST00000416215 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
PTPN6-203ENST00000416215 UACAQ9BZF9 1416 aa19.62■□□□□ 0.73
PTPN6-203ENST00000416215 ADCY10Q96PN6 1610 aa19.61■□□□□ 0.73
PTPN6-203ENST00000416215 DAPK1P53355 1430 aa19.61■□□□□ 0.73
PTPN6-203ENST00000416215 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
PTPN6-203ENST00000416215 ABCC5O15440 1437 aa19.6■□□□□ 0.73
PTPN6-203ENST00000416215 KDM6BO15054 1643 aa19.57■□□□□ 0.72
PTPN6-203ENST00000416215 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
PTPN6-203ENST00000416215 DNMT1P26358 1616 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms