RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-208ENST00000415548 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
CCT3-208ENST00000415548 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
CCT3-208ENST00000415548 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
CCT3-208ENST00000415548 SHROOM2Q13796 1616 aa14.28□□□□□ -0.12
CCT3-208ENST00000415548 JPH4Q96JJ6 628 aa14.24□□□□□ -0.13
CCT3-208ENST00000415548 PRG4Q92954 1404 aaPredicted RBP14.23□□□□□ -0.13
CCT3-208ENST00000415548 KIAA0586Q9BVV6 1533 aa14.21□□□□□ -0.13
CCT3-208ENST00000415548 FOXD1Q16676 465 aa14.2□□□□□ -0.14
CCT3-208ENST00000415548 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
CCT3-208ENST00000415548 IQGAP2Q13576 1575 aa14.13□□□□□ -0.15
CCT3-208ENST00000415548 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
CCT3-208ENST00000415548 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
CCT3-208ENST00000415548 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
CCT3-208ENST00000415548 CARMIL2Q6F5E8 1435 aa14.07□□□□□ -0.16
CCT3-208ENST00000415548 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
CCT3-208ENST00000415548 EEA1Q15075 1411 aa14.06□□□□□ -0.16
CCT3-208ENST00000415548 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
CCT3-208ENST00000415548 TTBK1Q5TCY1 1321 aaPredicted RBP14.05□□□□□ -0.16
CCT3-208ENST00000415548 DISP1Q96F81 1524 aa14.05□□□□□ -0.16
CCT3-208ENST00000415548 UGGT2Q9NYU1 1516 aa14.05□□□□□ -0.16
CCT3-208ENST00000415548 TNIKQ9UKE5 1360 aa14.04□□□□□ -0.16
CCT3-208ENST00000415548 PTPRGP23470 1445 aa14.04□□□□□ -0.16
CCT3-208ENST00000415548 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
CCT3-208ENST00000415548 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
CCT3-208ENST00000415548 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCT3-208ENST00000415548 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
CCT3-208ENST00000415548 UACAQ9BZF9 1416 aa13.94□□□□□ -0.18
CCT3-208ENST00000415548 MAPKBP1O60336 1514 aa13.94□□□□□ -0.18
CCT3-208ENST00000415548 KIF21BO75037 1637 aa13.93□□□□□ -0.18
CCT3-208ENST00000415548 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
CCT3-208ENST00000415548 ABCC2Q92887 1545 aa13.92□□□□□ -0.18
CCT3-208ENST00000415548 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
CCT3-208ENST00000415548 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
CCT3-208ENST00000415548 ABCC10Q5T3U5 1492 aa13.89□□□□□ -0.19
CCT3-208ENST00000415548 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
CCT3-208ENST00000415548 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
CCT3-208ENST00000415548 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
CCT3-208ENST00000415548 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
CCT3-208ENST00000415548 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
CCT3-208ENST00000415548 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
CCT3-208ENST00000415548 KDM5BQ9UGL1 1544 aa13.86□□□□□ -0.19
CCT3-208ENST00000415548 ABCA8O94911 1581 aa13.85□□□□□ -0.19
CCT3-208ENST00000415548 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
CCT3-208ENST00000415548 ZCCHC11Q5TAX3 1644 aaKnown RBP13.85□□□□□ -0.19
CCT3-208ENST00000415548 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
CCT3-208ENST00000415548 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
CCT3-208ENST00000415548 EFCAB5A4FU69 1503 aa13.79□□□□□ -0.2
CCT3-208ENST00000415548 TSPOAP1O95153 1857 aa13.78□□□□□ -0.2
CCT3-208ENST00000415548 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
CCT3-208ENST00000415548 EPRSP07814 1512 aaKnown RBP13.77□□□□□ -0.21
CCT3-208ENST00000415548 GLI2P10070 1586 aa13.77□□□□□ -0.21
CCT3-208ENST00000415548 RAPGEF6Q8TEU7 1601 aa13.76□□□□□ -0.21
CCT3-208ENST00000415548 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
CCT3-208ENST00000415548 ATP10BO94823 1461 aa13.74□□□□□ -0.21
CCT3-208ENST00000415548 KCNH8Q96L42 1107 aa13.72□□□□□ -0.21
CCT3-208ENST00000415548 NUP153P49790 1475 aaKnown RBP13.72□□□□□ -0.21
CCT3-208ENST00000415548 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
CCT3-208ENST00000415548 PPRC1Q5VV67 1664 aaKnown RBP13.72□□□□□ -0.21
CCT3-208ENST00000415548 MAP3K4Q9Y6R4 1608 aa13.71□□□□□ -0.22
CCT3-208ENST00000415548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
CCT3-208ENST00000415548 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
CCT3-208ENST00000415548 KDM6BO15054 1643 aa13.67□□□□□ -0.22
CCT3-208ENST00000415548 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
CCT3-208ENST00000415548 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
CCT3-208ENST00000415548 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
CCT3-208ENST00000415548 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
CCT3-208ENST00000415548 ATP1B4Q9UN42 357 aaPredicted RBP13.63□□□□□ -0.23
CCT3-208ENST00000415548 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
CCT3-208ENST00000415548 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
CCT3-208ENST00000415548 MAGI3Q5TCQ9 1506 aa13.61□□□□□ -0.23
CCT3-208ENST00000415548 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
CCT3-208ENST00000415548 CLIP1P30622 1438 aa13.61□□□□□ -0.23
CCT3-208ENST00000415548 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
CCT3-208ENST00000415548 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
CCT3-208ENST00000415548 PLPPR3Q6T4P5 718 aa13.57□□□□□ -0.24
CCT3-208ENST00000415548 PCF11O94913 1555 aaKnown RBP13.56□□□□□ -0.24
CCT3-208ENST00000415548 LRRIQ1Q96JM4 1722 aa13.56□□□□□ -0.24
CCT3-208ENST00000415548 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
CCT3-208ENST00000415548 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
CCT3-208ENST00000415548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCT3-208ENST00000415548 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
CCT3-208ENST00000415548 TTC37Q6PGP7 1564 aa13.53□□□□□ -0.24
CCT3-208ENST00000415548 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
CCT3-208ENST00000415548 FYCO1Q9BQS8 1478 aa13.51□□□□□ -0.25
CCT3-208ENST00000415548 ARAP3Q8WWN8 1544 aa13.5□□□□□ -0.25
CCT3-208ENST00000415548 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
CCT3-208ENST00000415548 NEO1Q92859 1461 aa13.5□□□□□ -0.25
CCT3-208ENST00000415548 TROQ12816 1431 aaPredicted RBP13.49□□□□□ -0.25
CCT3-208ENST00000415548 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
CCT3-208ENST00000415548 KIF14Q15058 1648 aa13.49□□□□□ -0.25
CCT3-208ENST00000415548 FANCAO15360 1455 aa13.46□□□□□ -0.25
CCT3-208ENST00000415548 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
CCT3-208ENST00000415548 PLCH2O75038 1416 aa13.45□□□□□ -0.26
CCT3-208ENST00000415548 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
CCT3-208ENST00000415548 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
CCT3-208ENST00000415548 MYO5CQ9NQX4 1742 aa13.44□□□□□ -0.26
CCT3-208ENST00000415548 FRMPD1Q5SYB0 1578 aa13.42□□□□□ -0.26
CCT3-208ENST00000415548 KDM4FA0A1W2PPD8 638 aa13.42□□□□□ -0.26
CCT3-208ENST00000415548 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
CCT3-208ENST00000415548 EFCAB2Q5VUJ9 269 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms