RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 NPM1P06748 294 aaKnown RBP eCLIP33.84■■■■□ 3.01
UBXN4-202ENST00000415164 KIF27Q86VH2 1401 aa33.83■■■■□ 3.01
UBXN4-202ENST00000415164 IGF1RP08069 1367 aa33.81■■■■□ 3
UBXN4-202ENST00000415164 FAM69CQ0P6D2 419 aa33.75■■■□□ 2.99
UBXN4-202ENST00000415164 KIF13AQ9H1H9 1805 aa33.74■■■□□ 2.99
UBXN4-202ENST00000415164 KIAA0586Q9BVV6 1533 aa33.74■■■□□ 2.99
UBXN4-202ENST00000415164 CUL7Q14999 1698 aa33.71■■■□□ 2.99
UBXN4-202ENST00000415164 TTBK1Q5TCY1 1321 aaPredicted RBP33.71■■■□□ 2.99
UBXN4-202ENST00000415164 ADCY10Q96PN6 1610 aa33.65■■■□□ 2.98
UBXN4-202ENST00000415164 ABCC10Q5T3U5 1492 aa33.64■■■□□ 2.98
UBXN4-202ENST00000415164 CARMIL1Q5VZK9 1371 aa33.62■■■□□ 2.97
UBXN4-202ENST00000415164 MAPKBP1O60336 1514 aa33.6■■■□□ 2.97
UBXN4-202ENST00000415164 DIP2BQ9P265 1576 aa33.55■■■□□ 2.96
UBXN4-202ENST00000415164 PTPRGP23470 1445 aa33.53■■■□□ 2.96
UBXN4-202ENST00000415164 CARMIL2Q6F5E8 1435 aa33.48■■■□□ 2.95
UBXN4-202ENST00000415164 TNIKQ9UKE5 1360 aa33.44■■■□□ 2.94
UBXN4-202ENST00000415164 IQGAP2Q13576 1575 aa33.41■■■□□ 2.94
UBXN4-202ENST00000415164 TSPOAP1O95153 1857 aa33.38■■■□□ 2.93
UBXN4-202ENST00000415164 KDM6BO15054 1643 aa33.35■■■□□ 2.93
UBXN4-202ENST00000415164 ABCC2Q92887 1545 aa33.33■■■□□ 2.93
UBXN4-202ENST00000415164 RAPGEF2Q9Y4G8 1499 aa33.28■■■□□ 2.92
UBXN4-202ENST00000415164 ASXL2Q76L83 1435 aa33.28■■■□□ 2.92
UBXN4-202ENST00000415164 DISP1Q96F81 1524 aa33.24■■■□□ 2.91
UBXN4-202ENST00000415164 UACAQ9BZF9 1416 aa33.24■■■□□ 2.91
UBXN4-202ENST00000415164 PLB1Q6P1J6 1458 aa33.22■■■□□ 2.91
UBXN4-202ENST00000415164 UHRF1BP1LA0JNW5 1464 aa33.19■■■□□ 2.9
UBXN4-202ENST00000415164 UGGT2Q9NYU1 1516 aa33.15■■■□□ 2.9
UBXN4-202ENST00000415164 KIAA0556O60303 1618 aa33.11■■■□□ 2.89
UBXN4-202ENST00000415164 KDM4FA0A1W2PPD8 638 aa33.11■■■□□ 2.89
UBXN4-202ENST00000415164 GLI2P10070 1586 aa33.09■■■□□ 2.89
UBXN4-202ENST00000415164 KDM5BQ9UGL1 1544 aa33.05■■■□□ 2.88
UBXN4-202ENST00000415164 EPRSP07814 1512 aaKnown RBP33.04■■■□□ 2.88
UBXN4-202ENST00000415164 PPRC1Q5VV67 1664 aaKnown RBP33.03■■■□□ 2.88
UBXN4-202ENST00000415164 ZCCHC11Q5TAX3 1644 aaKnown RBP33.02■■■□□ 2.88
UBXN4-202ENST00000415164 CTTNBP2Q8WZ74 1663 aa32.96■■■□□ 2.87
UBXN4-202ENST00000415164 GOLGA3Q08378 1498 aa32.93■■■□□ 2.86
UBXN4-202ENST00000415164 TEX14Q8IWB6 1497 aa32.92■■■□□ 2.86
UBXN4-202ENST00000415164 MAP3K4Q9Y6R4 1608 aa32.91■■■□□ 2.86
UBXN4-202ENST00000415164 WDR7Q9Y4E6 1490 aa32.9■■■□□ 2.86
UBXN4-202ENST00000415164 COL17A1Q9UMD9 1497 aaPredicted RBP32.88■■■□□ 2.85
UBXN4-202ENST00000415164 KCNH8Q96L42 1107 aa32.88■■■□□ 2.85
UBXN4-202ENST00000415164 PRXQ9BXM0 1461 aa32.83■■■□□ 2.85
UBXN4-202ENST00000415164 ADGRL1O94910 1474 aa32.82■■■□□ 2.84
UBXN4-202ENST00000415164 ARID3CA6NKF2 412 aa32.81■■■□□ 2.84
UBXN4-202ENST00000415164 P3H3Q8IVL6 736 aa32.8■■■□□ 2.84
UBXN4-202ENST00000415164 ABCA8O94911 1581 aa32.78■■■□□ 2.84
UBXN4-202ENST00000415164 FAM9AQ8IZU1 332 aaPredicted RBP32.77■■■□□ 2.84
UBXN4-202ENST00000415164 CD109Q6YHK3 1445 aa32.75■■■□□ 2.83
UBXN4-202ENST00000415164 CFAP43Q8NDM7 1665 aa32.66■■■□□ 2.82
UBXN4-202ENST00000415164 MAGI3Q5TCQ9 1506 aa32.64■■■□□ 2.82
UBXN4-202ENST00000415164 RANGAP1P46060 587 aaPredicted RBP32.63■■■□□ 2.81
UBXN4-202ENST00000415164 CSRNP3Q8WYN3 585 aa32.63■■■□□ 2.81
UBXN4-202ENST00000415164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.58■■■□□ 2.81
UBXN4-202ENST00000415164 HNRNPUL2Q1KMD3 747 aaKnown RBP32.58■■■□□ 2.81
UBXN4-202ENST00000415164 ATP10BO94823 1461 aa32.55■■■□□ 2.8
UBXN4-202ENST00000415164 SAMD9Q5K651 1589 aa32.47■■■□□ 2.79
UBXN4-202ENST00000415164 RAPGEF6Q8TEU7 1601 aa32.44■■■□□ 2.78
UBXN4-202ENST00000415164 HECW2Q9P2P5 1572 aa32.41■■■□□ 2.78
UBXN4-202ENST00000415164 KIF21BO75037 1637 aa32.4■■■□□ 2.78
UBXN4-202ENST00000415164 FHOD3Q2V2M9 1422 aa32.39■■■□□ 2.78
UBXN4-202ENST00000415164 ARAP3Q8WWN8 1544 aa32.38■■■□□ 2.77
UBXN4-202ENST00000415164 EEA1Q15075 1411 aa32.38■■■□□ 2.77
UBXN4-202ENST00000415164 ABCA9Q8IUA7 1624 aa32.37■■■□□ 2.77
UBXN4-202ENST00000415164 ILDR1Q86SU0 546 aaPredicted RBP32.35■■■□□ 2.77
UBXN4-202ENST00000415164 RAPGEF3O95398 923 aa32.34■■■□□ 2.77
UBXN4-202ENST00000415164 NUP153P49790 1475 aaKnown RBP32.32■■■□□ 2.76
UBXN4-202ENST00000415164 PHLDB1Q86UU1 1377 aa32.3■■■□□ 2.76
UBXN4-202ENST00000415164 EHMT2Q96KQ7 1210 aa32.29■■■□□ 2.76
UBXN4-202ENST00000415164 NEO1Q92859 1461 aa32.25■■■□□ 2.75
UBXN4-202ENST00000415164 PLEKHD1A6NEE1 506 aa32.25■■■□□ 2.75
UBXN4-202ENST00000415164 ARID4BQ4LE39 1312 aaPredicted RBP32.23■■■□□ 2.75
UBXN4-202ENST00000415164 EFCAB5A4FU69 1503 aa32.14■■■□□ 2.74
UBXN4-202ENST00000415164 ATP1B4Q9UN42 357 aaPredicted RBP32.13■■■□□ 2.73
UBXN4-202ENST00000415164 FRMPD1Q5SYB0 1578 aa32.12■■■□□ 2.73
UBXN4-202ENST00000415164 UBTFP17480 764 aaKnown RBP32.11■■■□□ 2.73
UBXN4-202ENST00000415164 PTPRMP28827 1452 aa32.1■■■□□ 2.73
UBXN4-202ENST00000415164 DENND4BO75064 1496 aaPredicted RBP32.09■■■□□ 2.73
UBXN4-202ENST00000415164 FANCAO15360 1455 aa32.08■■■□□ 2.73
UBXN4-202ENST00000415164 AKNAQ7Z591 1439 aa32.08■■■□□ 2.73
UBXN4-202ENST00000415164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.06■■■□□ 2.725e-6■■□□□ 11.8
UBXN4-202ENST00000415164 CDK13Q14004 1512 aaKnown RBP32.05■■■□□ 2.72
UBXN4-202ENST00000415164 ADAMTSL3P82987 1691 aa32.05■■■□□ 2.72
UBXN4-202ENST00000415164 TTC37Q6PGP7 1564 aa32.02■■■□□ 2.72
UBXN4-202ENST00000415164 PLPPR3Q6T4P5 718 aa32.01■■■□□ 2.71
UBXN4-202ENST00000415164 CFAP74Q9C0B2 1584 aa32.01■■■□□ 2.71
UBXN4-202ENST00000415164 BCORL1Q5H9F3 1711 aa32■■■□□ 2.71
UBXN4-202ENST00000415164 MADDQ8WXG6 1647 aa32■■■□□ 2.71
UBXN4-202ENST00000415164 ARHGEF40Q8TER5 1519 aa31.99■■■□□ 2.71
UBXN4-202ENST00000415164 RICTORQ6R327 1708 aa31.96■■■□□ 2.71
UBXN4-202ENST00000415164 FMN1Q68DA7 1419 aa31.91■■■□□ 2.7
UBXN4-202ENST00000415164 MLECQ14165 292 aa31.89■■■□□ 2.7
UBXN4-202ENST00000415164 YEATS2Q9ULM3 1422 aa31.89■■■□□ 2.7
UBXN4-202ENST00000415164 ZFYVE16Q7Z3T8 1539 aa31.89■■■□□ 2.7
UBXN4-202ENST00000415164 HECW1Q76N89 1606 aa31.89■■■□□ 2.7
UBXN4-202ENST00000415164 RIMS1Q86UR5 1692 aaKnown RBP31.89■■■□□ 2.7
UBXN4-202ENST00000415164 POGZQ7Z3K3 1410 aa31.87■■■□□ 2.69
UBXN4-202ENST00000415164 SCAPERQ9BY12 1400 aa31.87■■■□□ 2.69
UBXN4-202ENST00000415164 CHIC1Q5VXU3 224 aa31.87■■■□□ 2.69
UBXN4-202ENST00000415164 ARHGAP35Q9NRY4 1499 aa31.86■■■□□ 2.69
UBXN4-202ENST00000415164 CDK11AQ9UQ88 783 aaPredicted RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms