RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 ILDR1Q86SU0 546 aaPredicted RBP17.93■□□□□ 0.46
CRAMP1-203ENST00000415022 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
CRAMP1-203ENST00000415022 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
CRAMP1-203ENST00000415022 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
CRAMP1-203ENST00000415022 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
CRAMP1-203ENST00000415022 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
CRAMP1-203ENST00000415022 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
CRAMP1-203ENST00000415022 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
CRAMP1-203ENST00000415022 KIAA0586Q9BVV6 1533 aa17.75■□□□□ 0.43
CRAMP1-203ENST00000415022 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
CRAMP1-203ENST00000415022 EEA1Q15075 1411 aa17.72■□□□□ 0.43
CRAMP1-203ENST00000415022 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
CRAMP1-203ENST00000415022 KIF21BO75037 1637 aa17.69■□□□□ 0.42
CRAMP1-203ENST00000415022 PRG4Q92954 1404 aaPredicted RBP17.67■□□□□ 0.42
CRAMP1-203ENST00000415022 JPH4Q96JJ6 628 aa17.67■□□□□ 0.42
CRAMP1-203ENST00000415022 DISP1Q96F81 1524 aa17.64■□□□□ 0.41
CRAMP1-203ENST00000415022 UGGT2Q9NYU1 1516 aa17.62■□□□□ 0.41
CRAMP1-203ENST00000415022 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
CRAMP1-203ENST00000415022 KIAA0556O60303 1618 aa17.57■□□□□ 0.4
CRAMP1-203ENST00000415022 KDM4FA0A1W2PPD8 638 aa17.52■□□□□ 0.4
CRAMP1-203ENST00000415022 SAMD9Q5K651 1589 aa17.52■□□□□ 0.39
CRAMP1-203ENST00000415022 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
CRAMP1-203ENST00000415022 ADCY10Q96PN6 1610 aa17.5■□□□□ 0.39
CRAMP1-203ENST00000415022 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
CRAMP1-203ENST00000415022 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
CRAMP1-203ENST00000415022 PTPRGP23470 1445 aa17.42■□□□□ 0.38
CRAMP1-203ENST00000415022 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
CRAMP1-203ENST00000415022 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
CRAMP1-203ENST00000415022 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
CRAMP1-203ENST00000415022 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
CRAMP1-203ENST00000415022 ARHGAP35Q9NRY4 1499 aa17.38■□□□□ 0.37
CRAMP1-203ENST00000415022 ABCA8O94911 1581 aa17.38■□□□□ 0.37
CRAMP1-203ENST00000415022 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-203ENST00000415022 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
CRAMP1-203ENST00000415022 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
CRAMP1-203ENST00000415022 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
CRAMP1-203ENST00000415022 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
CRAMP1-203ENST00000415022 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.37
CRAMP1-203ENST00000415022 UACAQ9BZF9 1416 aa17.33■□□□□ 0.36
CRAMP1-203ENST00000415022 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
CRAMP1-203ENST00000415022 ZCCHC11Q5TAX3 1644 aaKnown RBP17.31■□□□□ 0.36
CRAMP1-203ENST00000415022 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
CRAMP1-203ENST00000415022 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
CRAMP1-203ENST00000415022 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
CRAMP1-203ENST00000415022 MAPKBP1O60336 1514 aa17.27■□□□□ 0.36
CRAMP1-203ENST00000415022 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
CRAMP1-203ENST00000415022 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
CRAMP1-203ENST00000415022 DIP2BQ9P265 1576 aa17.22■□□□□ 0.35
CRAMP1-203ENST00000415022 CLIP1P30622 1438 aa17.21■□□□□ 0.35
CRAMP1-203ENST00000415022 ATP10BO94823 1461 aa17.21■□□□□ 0.35
CRAMP1-203ENST00000415022 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
CRAMP1-203ENST00000415022 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
CRAMP1-203ENST00000415022 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
CRAMP1-203ENST00000415022 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
CRAMP1-203ENST00000415022 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
CRAMP1-203ENST00000415022 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
CRAMP1-203ENST00000415022 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
CRAMP1-203ENST00000415022 PPRC1Q5VV67 1664 aaKnown RBP17.14■□□□□ 0.33
CRAMP1-203ENST00000415022 KDM6BO15054 1643 aa17.13■□□□□ 0.33
CRAMP1-203ENST00000415022 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
CRAMP1-203ENST00000415022 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
CRAMP1-203ENST00000415022 TSPOAP1O95153 1857 aa17.11■□□□□ 0.33
CRAMP1-203ENST00000415022 WDR7Q9Y4E6 1490 aa17.11■□□□□ 0.33
CRAMP1-203ENST00000415022 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
CRAMP1-203ENST00000415022 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
CRAMP1-203ENST00000415022 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
CRAMP1-203ENST00000415022 GLI2P10070 1586 aa17.09■□□□□ 0.33
CRAMP1-203ENST00000415022 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
CRAMP1-203ENST00000415022 CASKIN1Q8WXD9 1431 aa17.08■□□□□ 0.32
CRAMP1-203ENST00000415022 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
CRAMP1-203ENST00000415022 ADGRL1O94910 1474 aa17.05■□□□□ 0.32
CRAMP1-203ENST00000415022 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
CRAMP1-203ENST00000415022 KIF14Q15058 1648 aa17.01■□□□□ 0.31
CRAMP1-203ENST00000415022 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
CRAMP1-203ENST00000415022 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
CRAMP1-203ENST00000415022 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
CRAMP1-203ENST00000415022 KCNH8Q96L42 1107 aa16.99■□□□□ 0.31
CRAMP1-203ENST00000415022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.97■□□□□ 0.31
CRAMP1-203ENST00000415022 ATP1B4Q9UN42 357 aaPredicted RBP16.97■□□□□ 0.31
CRAMP1-203ENST00000415022 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
CRAMP1-203ENST00000415022 LMTK3Q96Q04 1460 aa16.94■□□□□ 0.3
CRAMP1-203ENST00000415022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
CRAMP1-203ENST00000415022 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
CRAMP1-203ENST00000415022 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
CRAMP1-203ENST00000415022 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
CRAMP1-203ENST00000415022 TROQ12816 1431 aaPredicted RBP16.91■□□□□ 0.3
CRAMP1-203ENST00000415022 CD109Q6YHK3 1445 aa16.9■□□□□ 0.3
CRAMP1-203ENST00000415022 TIAM1Q13009 1591 aa16.89■□□□□ 0.3
CRAMP1-203ENST00000415022 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
CRAMP1-203ENST00000415022 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
CRAMP1-203ENST00000415022 SOCS7O14512 581 aa16.88■□□□□ 0.29
CRAMP1-203ENST00000415022 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
CRAMP1-203ENST00000415022 MYO5CQ9NQX4 1742 aa16.85■□□□□ 0.29
CRAMP1-203ENST00000415022 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
CRAMP1-203ENST00000415022 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
CRAMP1-203ENST00000415022 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
CRAMP1-203ENST00000415022 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
CRAMP1-203ENST00000415022 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
CRAMP1-203ENST00000415022 PLCH2O75038 1416 aa16.79■□□□□ 0.28
CRAMP1-203ENST00000415022 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms