RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
CNOT4-204ENST00000414802 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
CNOT4-204ENST00000414802 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
CNOT4-204ENST00000414802 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
CNOT4-204ENST00000414802 KIAA0586Q9BVV6 1533 aa21.36■■□□□ 1.01
CNOT4-204ENST00000414802 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
CNOT4-204ENST00000414802 SHROOM2Q13796 1616 aa21.32■■□□□ 1
CNOT4-204ENST00000414802 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
CNOT4-204ENST00000414802 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
CNOT4-204ENST00000414802 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
CNOT4-204ENST00000414802 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
CNOT4-204ENST00000414802 SAMD9Q5K651 1589 aa21.22■□□□□ 0.99
CNOT4-204ENST00000414802 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
CNOT4-204ENST00000414802 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
CNOT4-204ENST00000414802 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
CNOT4-204ENST00000414802 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
CNOT4-204ENST00000414802 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
CNOT4-204ENST00000414802 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
CNOT4-204ENST00000414802 CLIP1P30622 1438 aa21.15■□□□□ 0.98
CNOT4-204ENST00000414802 ARHGAP35Q9NRY4 1499 aa21.15■□□□□ 0.98
CNOT4-204ENST00000414802 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
CNOT4-204ENST00000414802 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
CNOT4-204ENST00000414802 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
CNOT4-204ENST00000414802 ARHGEF11O15085 1522 aa21.12■□□□□ 0.97
CNOT4-204ENST00000414802 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
CNOT4-204ENST00000414802 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
CNOT4-204ENST00000414802 CARMIL2Q6F5E8 1435 aa21.1■□□□□ 0.97
CNOT4-204ENST00000414802 ARAP1Q96P48 1450 aa21.08■□□□□ 0.96
CNOT4-204ENST00000414802 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
CNOT4-204ENST00000414802 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
CNOT4-204ENST00000414802 PTPRGP23470 1445 aa20.95■□□□□ 0.94
CNOT4-204ENST00000414802 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
CNOT4-204ENST00000414802 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
CNOT4-204ENST00000414802 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
CNOT4-204ENST00000414802 PLB1Q6P1J6 1458 aa20.91■□□□□ 0.94
CNOT4-204ENST00000414802 FMN1Q68DA7 1419 aa20.91■□□□□ 0.94
CNOT4-204ENST00000414802 ABCA8O94911 1581 aa20.91■□□□□ 0.94
CNOT4-204ENST00000414802 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
CNOT4-204ENST00000414802 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.93
CNOT4-204ENST00000414802 HECW1Q76N89 1606 aa20.87■□□□□ 0.93
CNOT4-204ENST00000414802 ABCC2Q92887 1545 aa20.85■□□□□ 0.93
CNOT4-204ENST00000414802 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
CNOT4-204ENST00000414802 FYCO1Q9BQS8 1478 aa20.83■□□□□ 0.93
CNOT4-204ENST00000414802 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.92
CNOT4-204ENST00000414802 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
CNOT4-204ENST00000414802 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
CNOT4-204ENST00000414802 ATP1B4Q9UN42 357 aaPredicted RBP20.79■□□□□ 0.92
CNOT4-204ENST00000414802 ZCCHC11Q5TAX3 1644 aaKnown RBP20.78■□□□□ 0.92
CNOT4-204ENST00000414802 ARID3CA6NKF2 412 aa20.78■□□□□ 0.92
CNOT4-204ENST00000414802 UHRF1BP1LA0JNW5 1464 aa20.78■□□□□ 0.92
CNOT4-204ENST00000414802 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
CNOT4-204ENST00000414802 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
CNOT4-204ENST00000414802 EPRSP07814 1512 aaKnown RBP20.73■□□□□ 0.91
CNOT4-204ENST00000414802 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
CNOT4-204ENST00000414802 TIAM1Q13009 1591 aa20.7■□□□□ 0.9
CNOT4-204ENST00000414802 ATP10BO94823 1461 aa20.69■□□□□ 0.9
CNOT4-204ENST00000414802 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
CNOT4-204ENST00000414802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
CNOT4-204ENST00000414802 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
CNOT4-204ENST00000414802 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
CNOT4-204ENST00000414802 MAP3K1Q13233 1512 aa20.59■□□□□ 0.89
CNOT4-204ENST00000414802 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
CNOT4-204ENST00000414802 MAPKBP1O60336 1514 aa20.58■□□□□ 0.88
CNOT4-204ENST00000414802 ASXL2Q76L83 1435 aa20.57■□□□□ 0.88
CNOT4-204ENST00000414802 APLP2Q06481 763 aa20.57■□□□□ 0.88
CNOT4-204ENST00000414802 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
CNOT4-204ENST00000414802 KIF14Q15058 1648 aa20.56■□□□□ 0.88
CNOT4-204ENST00000414802 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
CNOT4-204ENST00000414802 WDR7Q9Y4E6 1490 aa20.54■□□□□ 0.88
CNOT4-204ENST00000414802 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
CNOT4-204ENST00000414802 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
CNOT4-204ENST00000414802 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
CNOT4-204ENST00000414802 TROQ12816 1431 aaPredicted RBP20.52■□□□□ 0.88
CNOT4-204ENST00000414802 SUPT6HQ7KZ85 1726 aaKnown RBP20.52■□□□□ 0.88
CNOT4-204ENST00000414802 KIF13AQ9H1H9 1805 aa20.5■□□□□ 0.87
CNOT4-204ENST00000414802 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
CNOT4-204ENST00000414802 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
CNOT4-204ENST00000414802 TTC37Q6PGP7 1564 aa20.48■□□□□ 0.87
CNOT4-204ENST00000414802 DIP2BQ9P265 1576 aa20.48■□□□□ 0.87
CNOT4-204ENST00000414802 KCNH8Q96L42 1107 aa20.45■□□□□ 0.86
CNOT4-204ENST00000414802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.86
CNOT4-204ENST00000414802 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
CNOT4-204ENST00000414802 MYO5CQ9NQX4 1742 aa20.43■□□□□ 0.86
CNOT4-204ENST00000414802 ABCA9Q8IUA7 1624 aa20.43■□□□□ 0.86
CNOT4-204ENST00000414802 TSPOAP1O95153 1857 aa20.42■□□□□ 0.86
CNOT4-204ENST00000414802 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
CNOT4-204ENST00000414802 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
CNOT4-204ENST00000414802 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
CNOT4-204ENST00000414802 CDC42BPBQ9Y5S2 1711 aa20.38■□□□□ 0.85
CNOT4-204ENST00000414802 MAP3K4Q9Y6R4 1608 aa20.38■□□□□ 0.85
CNOT4-204ENST00000414802 GLI2P10070 1586 aa20.38■□□□□ 0.85
CNOT4-204ENST00000414802 PREX2Q70Z35 1606 aa20.37■□□□□ 0.85
CNOT4-204ENST00000414802 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
CNOT4-204ENST00000414802 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.84
CNOT4-204ENST00000414802 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
CNOT4-204ENST00000414802 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
CNOT4-204ENST00000414802 GPATCH8Q9UKJ3 1502 aaKnown RBP20.3■□□□□ 0.84
CNOT4-204ENST00000414802 ARHGAP5Q13017 1502 aa20.28■□□□□ 0.84
CNOT4-204ENST00000414802 MYOM3Q5VTT5 1437 aa20.28■□□□□ 0.84
CNOT4-204ENST00000414802 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms