RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 SHROOM2Q13796 1616 aa42.45■■■■■ 4.39
CPNE1-207ENST00000414664 JPH4Q96JJ6 628 aa42.43■■■■■ 4.38
CPNE1-207ENST00000414664 KIAA0586Q9BVV6 1533 aa42.42■■■■■ 4.38
CPNE1-207ENST00000414664 EEA1Q15075 1411 aa42.34■■■■■ 4.37
CPNE1-207ENST00000414664 PRG4Q92954 1404 aaPredicted RBP42.31■■■■■ 4.36
CPNE1-207ENST00000414664 CSRNP3Q8WYN3 585 aa42.3■■■■■ 4.36
CPNE1-207ENST00000414664 ERCC6L2Q5T890 1561 aa42.29■■■■■ 4.36
CPNE1-207ENST00000414664 PRXQ9BXM0 1461 aa42.26■■■■■ 4.36
CPNE1-207ENST00000414664 IQGAP2Q13576 1575 aa42.16■■■■■ 4.34
CPNE1-207ENST00000414664 FAM9AQ8IZU1 332 aaPredicted RBP42.11■■■■■ 4.33
CPNE1-207ENST00000414664 CARMIL2Q6F5E8 1435 aa42.03■■■■■ 4.32
CPNE1-207ENST00000414664 CTTNBP2Q8WZ74 1663 aa42■■■■■ 4.31
CPNE1-207ENST00000414664 UGGT2Q9NYU1 1516 aa41.93■■■■■ 4.3
CPNE1-207ENST00000414664 TNIKQ9UKE5 1360 aa41.86■■■■■ 4.29
CPNE1-207ENST00000414664 DISP1Q96F81 1524 aa41.85■■■■■ 4.29
CPNE1-207ENST00000414664 PTPRGP23470 1445 aa41.84■■■■■ 4.29
CPNE1-207ENST00000414664 KIF21BO75037 1637 aa41.83■■■■■ 4.29
CPNE1-207ENST00000414664 GOLGA3Q08378 1498 aa41.77■■■■■ 4.28
CPNE1-207ENST00000414664 KIAA0556O60303 1618 aa41.74■■■■■ 4.27
CPNE1-207ENST00000414664 TTBK1Q5TCY1 1321 aaPredicted RBP41.73■■■■■ 4.27
CPNE1-207ENST00000414664 TRHP20396 242 aaPredicted RBP41.69■■■■■ 4.26
CPNE1-207ENST00000414664 NPM1P06748 294 aaKnown RBP eCLIP41.67■■■■■ 4.26
CPNE1-207ENST00000414664 ADCY10Q96PN6 1610 aa41.62■■■■■ 4.25
CPNE1-207ENST00000414664 UBTFP17480 764 aaKnown RBP41.57■■■■■ 4.25
CPNE1-207ENST00000414664 UACAQ9BZF9 1416 aa41.54■■■■■ 4.24
CPNE1-207ENST00000414664 EHMT2Q96KQ7 1210 aa41.54■■■■■ 4.24
CPNE1-207ENST00000414664 UHRF1BP1LA0JNW5 1464 aa41.49■■■■■ 4.23
CPNE1-207ENST00000414664 SAMD9Q5K651 1589 aa41.46■■■■■ 4.23
CPNE1-207ENST00000414664 RANGAP1P46060 587 aaPredicted RBP41.45■■■■■ 4.23
CPNE1-207ENST00000414664 P3H3Q8IVL6 736 aa41.45■■■■■ 4.23
CPNE1-207ENST00000414664 ABCC2Q92887 1545 aa41.44■■■■■ 4.22
CPNE1-207ENST00000414664 MAPKBP1O60336 1514 aa41.4■■■■■ 4.22
CPNE1-207ENST00000414664 PLB1Q6P1J6 1458 aa41.34■■■■■ 4.21
CPNE1-207ENST00000414664 EFCAB5A4FU69 1503 aa41.32■■■■■ 4.2
CPNE1-207ENST00000414664 ABCA8O94911 1581 aa41.29■■■■■ 4.2
CPNE1-207ENST00000414664 KDM5BQ9UGL1 1544 aa41.28■■■■■ 4.2
CPNE1-207ENST00000414664 ABCC10Q5T3U5 1492 aa41.22■■■■■ 4.19
CPNE1-207ENST00000414664 FHOD3Q2V2M9 1422 aa41.22■■■■■ 4.19
CPNE1-207ENST00000414664 FAM69CQ0P6D2 419 aa41.18■■■■■ 4.18
CPNE1-207ENST00000414664 ZCCHC11Q5TAX3 1644 aaKnown RBP41.17■■■■■ 4.18
CPNE1-207ENST00000414664 ASXL2Q76L83 1435 aa41.17■■■■■ 4.18
CPNE1-207ENST00000414664 KIF13AQ9H1H9 1805 aa41.16■■■■■ 4.18
CPNE1-207ENST00000414664 DIP2BQ9P265 1576 aa41.12■■■■■ 4.17
CPNE1-207ENST00000414664 RAPGEF6Q8TEU7 1601 aa41.08■■■■■ 4.17
CPNE1-207ENST00000414664 ARHGAP35Q9NRY4 1499 aa41.07■■■■■ 4.16
CPNE1-207ENST00000414664 ATP10BO94823 1461 aa40.97■■■■■ 4.15
CPNE1-207ENST00000414664 FMN1Q68DA7 1419 aa40.97■■■■■ 4.15
CPNE1-207ENST00000414664 ARID3CA6NKF2 412 aa40.96■■■■■ 4.15
CPNE1-207ENST00000414664 WDR7Q9Y4E6 1490 aa40.96■■■■■ 4.15
CPNE1-207ENST00000414664 GLI2P10070 1586 aa40.93■■■■■ 4.14
CPNE1-207ENST00000414664 EPRSP07814 1512 aaKnown RBP40.92■■■■■ 4.14
CPNE1-207ENST00000414664 NUP153P49790 1475 aaKnown RBP40.91■■■■■ 4.14
CPNE1-207ENST00000414664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.9■■■■■ 4.14
CPNE1-207ENST00000414664 HNRNPUL2Q1KMD3 747 aaKnown RBP40.9■■■■■ 4.14
CPNE1-207ENST00000414664 CLIP1P30622 1438 aa40.86■■■■■ 4.13
CPNE1-207ENST00000414664 KCNH8Q96L42 1107 aa40.82■■■■■ 4.13
CPNE1-207ENST00000414664 TSPOAP1O95153 1857 aa40.77■■■■■ 4.12
CPNE1-207ENST00000414664 ATP1B4Q9UN42 357 aaPredicted RBP40.77■■■■■ 4.12
CPNE1-207ENST00000414664 LOC105371045A0A1W2PR82 267 aa40.74■■■■■ 4.11
CPNE1-207ENST00000414664 HECW1Q76N89 1606 aa40.74■■■■■ 4.11
CPNE1-207ENST00000414664 PLEKHD1A6NEE1 506 aa40.71■■■■■ 4.11
CPNE1-207ENST00000414664 MAP3K4Q9Y6R4 1608 aa40.71■■■■■ 4.11
CPNE1-207ENST00000414664 CEP162Q5TB80 1403 aa40.66■■■■■ 4.1
CPNE1-207ENST00000414664 CFAP43Q8NDM7 1665 aa40.62■■■■■ 4.09
CPNE1-207ENST00000414664 CD109Q6YHK3 1445 aa40.61■■■■■ 4.09
CPNE1-207ENST00000414664 CASKIN1Q8WXD9 1431 aa40.61■■■■■ 4.09
CPNE1-207ENST00000414664 CDK13Q14004 1512 aaKnown RBP40.61■■■■■ 4.09
CPNE1-207ENST00000414664 PPRC1Q5VV67 1664 aaKnown RBP40.6■■■■■ 4.09
CPNE1-207ENST00000414664 TEX14Q8IWB6 1497 aa40.6■■■■■ 4.09
CPNE1-207ENST00000414664 CDK11AQ9UQ88 783 aaPredicted RBP40.58■■■■■ 4.09
CPNE1-207ENST00000414664 PCF11O94913 1555 aaKnown RBP40.54■■■■■ 4.08
CPNE1-207ENST00000414664 MAGI3Q5TCQ9 1506 aa40.52■■■■■ 4.08
CPNE1-207ENST00000414664 FYCO1Q9BQS8 1478 aa40.51■■■■■ 4.08
CPNE1-207ENST00000414664 ABCA9Q8IUA7 1624 aa40.51■■■■■ 4.08
CPNE1-207ENST00000414664 KDM6BO15054 1643 aa40.49■■■■■ 4.07
CPNE1-207ENST00000414664 CCDC18Q5T9S5 1454 aa40.48■■■■■ 4.07
CPNE1-207ENST00000414664 LRRIQ1Q96JM4 1722 aa40.42■■■■■ 4.06
CPNE1-207ENST00000414664 TROQ12816 1431 aaPredicted RBP40.35■■■■■ 4.05
CPNE1-207ENST00000414664 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.34■■■■■ 4.051e-38■■□□□ 13.2
CPNE1-207ENST00000414664 PHLDB1Q86UU1 1377 aa40.3■■■■■ 4.04
CPNE1-207ENST00000414664 TTC37Q6PGP7 1564 aa40.25■■■■■ 4.03
CPNE1-207ENST00000414664 COL17A1Q9UMD9 1497 aaPredicted RBP40.25■■■■■ 4.03
CPNE1-207ENST00000414664 KIF14Q15058 1648 aa40.24■■■■■ 4.03
CPNE1-207ENST00000414664 NEO1Q92859 1461 aa40.23■■■■■ 4.03
CPNE1-207ENST00000414664 VPS8Q8N3P4 1428 aa40.19■■■■■ 4.02
CPNE1-207ENST00000414664 ARAP3Q8WWN8 1544 aa40.16■■■■■ 4.02
CPNE1-207ENST00000414664 PLCH2O75038 1416 aa40.15■■■■■ 4.02
CPNE1-207ENST00000414664 FANCAO15360 1455 aa40.13■■■■■ 4.01
CPNE1-207ENST00000414664 CFAP74Q9C0B2 1584 aa40.12■■■■■ 4.01
CPNE1-207ENST00000414664 MYO5CQ9NQX4 1742 aa40.09■■■■■ 4.01
CPNE1-207ENST00000414664 MTUS2Q5JR59 1369 aa40.08■■■■■ 4.01
CPNE1-207ENST00000414664 AKNAQ7Z591 1439 aa40.07■■■■■ 4
CPNE1-207ENST00000414664 EFCAB2Q5VUJ9 269 aa40.05■■■■■ 4
CPNE1-207ENST00000414664 ARHGAP5Q13017 1502 aa39.96■■■■□ 3.99
CPNE1-207ENST00000414664 RAPGEF3O95398 923 aa39.96■■■■□ 3.99
CPNE1-207ENST00000414664 DENND4BO75064 1496 aaPredicted RBP39.95■■■■□ 3.99
CPNE1-207ENST00000414664 EHBP1L1Q8N3D4 1523 aa39.95■■■■□ 3.99
CPNE1-207ENST00000414664 TIAM1Q13009 1591 aa39.93■■■■□ 3.98
CPNE1-207ENST00000414664 ADGRL1O94910 1474 aa39.91■■■■□ 3.98
CPNE1-207ENST00000414664 PREX2Q70Z35 1606 aa39.9■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms