RNA–Protein interactions for RNA: ENST00000414302.6

VNN3-204, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-204ENST00000414302 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
VNN3-204ENST00000414302 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
VNN3-204ENST00000414302 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
VNN3-204ENST00000414302 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
VNN3-204ENST00000414302 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
VNN3-204ENST00000414302 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
VNN3-204ENST00000414302 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
VNN3-204ENST00000414302 IQGAP2Q13576 1575 aa16.6■□□□□ 0.25
VNN3-204ENST00000414302 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
VNN3-204ENST00000414302 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
VNN3-204ENST00000414302 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
VNN3-204ENST00000414302 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
VNN3-204ENST00000414302 PTPRGP23470 1445 aa16.53■□□□□ 0.24
VNN3-204ENST00000414302 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
VNN3-204ENST00000414302 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
VNN3-204ENST00000414302 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
VNN3-204ENST00000414302 ADCY10Q96PN6 1610 aa16.5■□□□□ 0.23
VNN3-204ENST00000414302 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
VNN3-204ENST00000414302 UGGT2Q9NYU1 1516 aa16.49■□□□□ 0.23
VNN3-204ENST00000414302 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
VNN3-204ENST00000414302 EEA1Q15075 1411 aa16.48■□□□□ 0.23
VNN3-204ENST00000414302 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
VNN3-204ENST00000414302 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
VNN3-204ENST00000414302 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
VNN3-204ENST00000414302 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
VNN3-204ENST00000414302 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
VNN3-204ENST00000414302 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
VNN3-204ENST00000414302 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
VNN3-204ENST00000414302 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
VNN3-204ENST00000414302 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
VNN3-204ENST00000414302 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
VNN3-204ENST00000414302 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
VNN3-204ENST00000414302 KIF13AQ9H1H9 1805 aa16.36■□□□□ 0.21
VNN3-204ENST00000414302 PLB1Q6P1J6 1458 aa16.34■□□□□ 0.21
VNN3-204ENST00000414302 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
VNN3-204ENST00000414302 KIF21BO75037 1637 aa16.32■□□□□ 0.2
VNN3-204ENST00000414302 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
VNN3-204ENST00000414302 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
VNN3-204ENST00000414302 ZCCHC11Q5TAX3 1644 aaKnown RBP16.29■□□□□ 0.2
VNN3-204ENST00000414302 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
VNN3-204ENST00000414302 ABCA8O94911 1581 aa16.27■□□□□ 0.2
VNN3-204ENST00000414302 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
VNN3-204ENST00000414302 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
VNN3-204ENST00000414302 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
VNN3-204ENST00000414302 EPRSP07814 1512 aaKnown RBP16.21■□□□□ 0.19
VNN3-204ENST00000414302 TSPOAP1O95153 1857 aa16.21■□□□□ 0.19
VNN3-204ENST00000414302 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
VNN3-204ENST00000414302 GLI2P10070 1586 aa16.19■□□□□ 0.18
VNN3-204ENST00000414302 EFCAB5A4FU69 1503 aa16.18■□□□□ 0.18
VNN3-204ENST00000414302 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
VNN3-204ENST00000414302 RAPGEF6Q8TEU7 1601 aa16.17■□□□□ 0.18
VNN3-204ENST00000414302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
VNN3-204ENST00000414302 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
VNN3-204ENST00000414302 ATP10BO94823 1461 aa16.15■□□□□ 0.18
VNN3-204ENST00000414302 KDM6BO15054 1643 aa16.14■□□□□ 0.17
VNN3-204ENST00000414302 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
VNN3-204ENST00000414302 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
VNN3-204ENST00000414302 NUP153P49790 1475 aaKnown RBP16.11■□□□□ 0.17
VNN3-204ENST00000414302 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
VNN3-204ENST00000414302 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
VNN3-204ENST00000414302 TEX14Q8IWB6 1497 aa16.08■□□□□ 0.16
VNN3-204ENST00000414302 CD109Q6YHK3 1445 aa16.07■□□□□ 0.16
VNN3-204ENST00000414302 CFAP43Q8NDM7 1665 aa16.04■□□□□ 0.16
VNN3-204ENST00000414302 FMN1Q68DA7 1419 aa16.04■□□□□ 0.16
VNN3-204ENST00000414302 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
VNN3-204ENST00000414302 CDK13Q14004 1512 aaKnown RBP16.02■□□□□ 0.15
VNN3-204ENST00000414302 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
VNN3-204ENST00000414302 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
VNN3-204ENST00000414302 HECW1Q76N89 1606 aa16■□□□□ 0.15
VNN3-204ENST00000414302 ABCA9Q8IUA7 1624 aa15.98■□□□□ 0.15
VNN3-204ENST00000414302 CLIP1P30622 1438 aa15.96■□□□□ 0.15
VNN3-204ENST00000414302 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
VNN3-204ENST00000414302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
VNN3-204ENST00000414302 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
VNN3-204ENST00000414302 TTC37Q6PGP7 1564 aa15.9■□□□□ 0.14
VNN3-204ENST00000414302 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.13
VNN3-204ENST00000414302 NEO1Q92859 1461 aa15.88■□□□□ 0.13
VNN3-204ENST00000414302 LRRIQ1Q96JM4 1722 aa15.87■□□□□ 0.13
VNN3-204ENST00000414302 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
VNN3-204ENST00000414302 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
VNN3-204ENST00000414302 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
VNN3-204ENST00000414302 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
VNN3-204ENST00000414302 PHLDB1Q86UU1 1377 aa15.86■□□□□ 0.13
VNN3-204ENST00000414302 FANCAO15360 1455 aa15.85■□□□□ 0.13
VNN3-204ENST00000414302 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
VNN3-204ENST00000414302 FYCO1Q9BQS8 1478 aa15.85■□□□□ 0.13
VNN3-204ENST00000414302 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
VNN3-204ENST00000414302 KDM4FA0A1W2PPD8 638 aa15.85■□□□□ 0.13
VNN3-204ENST00000414302 KIF14Q15058 1648 aa15.85■□□□□ 0.13
VNN3-204ENST00000414302 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
VNN3-204ENST00000414302 CFAP74Q9C0B2 1584 aa15.81■□□□□ 0.12
VNN3-204ENST00000414302 ADGRL1O94910 1474 aa15.81■□□□□ 0.12
VNN3-204ENST00000414302 PLCH2O75038 1416 aa15.81■□□□□ 0.12
VNN3-204ENST00000414302 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
VNN3-204ENST00000414302 DENND4BO75064 1496 aaPredicted RBP15.79■□□□□ 0.12
VNN3-204ENST00000414302 MYO5CQ9NQX4 1742 aa15.78■□□□□ 0.12
VNN3-204ENST00000414302 ARHGAP5Q13017 1502 aa15.77■□□□□ 0.11
VNN3-204ENST00000414302 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
VNN3-204ENST00000414302 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
VNN3-204ENST00000414302 RICTORQ6R327 1708 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms