RNA–Protein interactions for RNA: ENST00000414200.6

CCND3-204, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 1,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-204ENST00000414200 NUP160Q12769 1436 aa30.24■■■□□ 2.43
CCND3-204ENST00000414200 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
CCND3-204ENST00000414200 IGF1RP08069 1367 aa30.21■■■□□ 2.43
CCND3-204ENST00000414200 TRIM26Q12899 539 aaPredicted RBP30.2■■■□□ 2.43
CCND3-204ENST00000414200 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
CCND3-204ENST00000414200 ERCC6L2Q5T890 1561 aa30.1■■■□□ 2.41
CCND3-204ENST00000414200 GOLGA3Q08378 1498 aa30.1■■■□□ 2.41
CCND3-204ENST00000414200 KIF21BO75037 1637 aa30.09■■■□□ 2.41
CCND3-204ENST00000414200 CUL7Q14999 1698 aa30.07■■■□□ 2.4
CCND3-204ENST00000414200 HRCP23327 699 aa30.07■■■□□ 2.4
CCND3-204ENST00000414200 SHROOM2Q13796 1616 aa30.04■■■□□ 2.4
CCND3-204ENST00000414200 CEP162Q5TB80 1403 aa30.02■■■□□ 2.4
CCND3-204ENST00000414200 CARMIL1Q5VZK9 1371 aa30.01■■■□□ 2.4
CCND3-204ENST00000414200 JPH4Q96JJ6 628 aa29.99■■■□□ 2.39
CCND3-204ENST00000414200 PRG4Q92954 1404 aaPredicted RBP29.95■■■□□ 2.39
CCND3-204ENST00000414200 KIAA0586Q9BVV6 1533 aa29.89■■■□□ 2.38
CCND3-204ENST00000414200 UBTFP17480 764 aaKnown RBP29.85■■■□□ 2.37
CCND3-204ENST00000414200 TRHP20396 242 aaPredicted RBP29.85■■■□□ 2.37
CCND3-204ENST00000414200 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
CCND3-204ENST00000414200 PRXQ9BXM0 1461 aa29.75■■■□□ 2.35
CCND3-204ENST00000414200 IQGAP2Q13576 1575 aa29.69■■■□□ 2.34
CCND3-204ENST00000414200 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
CCND3-204ENST00000414200 CLIP1P30622 1438 aa29.63■■■□□ 2.33
CCND3-204ENST00000414200 CARMIL2Q6F5E8 1435 aa29.57■■■□□ 2.32
CCND3-204ENST00000414200 PTPRGP23470 1445 aa29.55■■■□□ 2.32
CCND3-204ENST00000414200 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
CCND3-204ENST00000414200 DISP1Q96F81 1524 aa29.53■■■□□ 2.32
CCND3-204ENST00000414200 ADCY10Q96PN6 1610 aa29.53■■■□□ 2.32
CCND3-204ENST00000414200 CTTNBP2Q8WZ74 1663 aa29.52■■■□□ 2.32
CCND3-204ENST00000414200 UGGT2Q9NYU1 1516 aa29.51■■■□□ 2.31
CCND3-204ENST00000414200 VPS8Q8N3P4 1428 aa29.48■■■□□ 2.31
CCND3-204ENST00000414200 NPM1P06748 294 aaKnown RBP eCLIP29.48■■■□□ 2.31
CCND3-204ENST00000414200 KIAA0556O60303 1618 aa29.42■■■□□ 2.3
CCND3-204ENST00000414200 MAPKBP1O60336 1514 aa29.34■■■□□ 2.29
CCND3-204ENST00000414200 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
CCND3-204ENST00000414200 ZEB1P37275 1124 aaPredicted RBP29.33■■■□□ 2.29
CCND3-204ENST00000414200 UACAQ9BZF9 1416 aa29.32■■■□□ 2.28
CCND3-204ENST00000414200 ABCC2Q92887 1545 aa29.29■■■□□ 2.28
CCND3-204ENST00000414200 FAM69CQ0P6D2 419 aa29.28■■■□□ 2.28
CCND3-204ENST00000414200 UHRF1BP1LA0JNW5 1464 aa29.27■■■□□ 2.28
CCND3-204ENST00000414200 ABCC10Q5T3U5 1492 aa29.27■■■□□ 2.28
CCND3-204ENST00000414200 P3H3Q8IVL6 736 aa29.25■■■□□ 2.27
CCND3-204ENST00000414200 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
CCND3-204ENST00000414200 RANGAP1P46060 587 aaPredicted RBP29.22■■■□□ 2.27
CCND3-204ENST00000414200 PLB1Q6P1J6 1458 aa29.2■■■□□ 2.27
CCND3-204ENST00000414200 ASXL2Q76L83 1435 aa29.17■■■□□ 2.26
CCND3-204ENST00000414200 ARHGAP35Q9NRY4 1499 aa29.17■■■□□ 2.26
CCND3-204ENST00000414200 KDM5BQ9UGL1 1544 aa29.16■■■□□ 2.26
CCND3-204ENST00000414200 ZCCHC11Q5TAX3 1644 aaKnown RBP29.13■■■□□ 2.25
CCND3-204ENST00000414200 SAMD9Q5K651 1589 aa29.12■■■□□ 2.25
CCND3-204ENST00000414200 ABCA8O94911 1581 aa29.11■■■□□ 2.25
CCND3-204ENST00000414200 APLP2Q06481 763 aa29.09■■■□□ 2.25
CCND3-204ENST00000414200 TSPOAP1O95153 1857 aa29.07■■■□□ 2.24
CCND3-204ENST00000414200 ARID3CA6NKF2 412 aa29.03■■■□□ 2.24
CCND3-204ENST00000414200 FHOD3Q2V2M9 1422 aa29.01■■■□□ 2.23
CCND3-204ENST00000414200 EPRSP07814 1512 aaKnown RBP28.98■■■□□ 2.23
CCND3-204ENST00000414200 GLI2P10070 1586 aa28.97■■■□□ 2.23
CCND3-204ENST00000414200 WDR7Q9Y4E6 1490 aa28.95■■■□□ 2.22
CCND3-204ENST00000414200 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
CCND3-204ENST00000414200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.91■■■□□ 2.22
CCND3-204ENST00000414200 KCNH8Q96L42 1107 aa28.91■■■□□ 2.22
CCND3-204ENST00000414200 ATP10BO94823 1461 aa28.9■■■□□ 2.22
CCND3-204ENST00000414200 EFCAB5A4FU69 1503 aa28.9■■■□□ 2.22
CCND3-204ENST00000414200 MAP3K1Q13233 1512 aa28.88■■■□□ 2.21
CCND3-204ENST00000414200 PPRC1Q5VV67 1664 aaKnown RBP28.88■■■□□ 2.21
CCND3-204ENST00000414200 MAP3K4Q9Y6R4 1608 aa28.86■■■□□ 2.21
CCND3-204ENST00000414200 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
CCND3-204ENST00000414200 KDM6BO15054 1643 aa28.84■■■□□ 2.21
CCND3-204ENST00000414200 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
CCND3-204ENST00000414200 NUP153P49790 1475 aaKnown RBP28.82■■■□□ 2.2
CCND3-204ENST00000414200 KANK4Q5T7N3 995 aaPredicted RBP28.82■■■□□ 2.2
CCND3-204ENST00000414200 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
CCND3-204ENST00000414200 CD109Q6YHK3 1445 aa28.73■■■□□ 2.19
CCND3-204ENST00000414200 RRBP1Q9P2E9 1410 aaKnown RBP28.73■■■□□ 2.19
CCND3-204ENST00000414200 TEX14Q8IWB6 1497 aa28.71■■■□□ 2.19
CCND3-204ENST00000414200 CFAP43Q8NDM7 1665 aa28.71■■■□□ 2.19
CCND3-204ENST00000414200 PCF11O94913 1555 aaKnown RBP28.7■■■□□ 2.19
CCND3-204ENST00000414200 COL17A1Q9UMD9 1497 aaPredicted RBP28.68■■■□□ 2.18
CCND3-204ENST00000414200 ATP1B4Q9UN42 357 aaPredicted RBP28.68■■■□□ 2.18
CCND3-204ENST00000414200 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
CCND3-204ENST00000414200 FYCO1Q9BQS8 1478 aa28.66■■■□□ 2.18
CCND3-204ENST00000414200 MAGI3Q5TCQ9 1506 aa28.64■■■□□ 2.18
CCND3-204ENST00000414200 CDK13Q14004 1512 aaKnown RBP28.63■■■□□ 2.17
CCND3-204ENST00000414200 CASKIN1Q8WXD9 1431 aa28.63■■■□□ 2.17
CCND3-204ENST00000414200 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
CCND3-204ENST00000414200 LRRC9Q6ZRR7 1453 aa28.62■■■□□ 2.17
CCND3-204ENST00000414200 ABCA9Q8IUA7 1624 aa28.6■■■□□ 2.17
CCND3-204ENST00000414200 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
CCND3-204ENST00000414200 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
CCND3-204ENST00000414200 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
CCND3-204ENST00000414200 LRRIQ1Q96JM4 1722 aa28.47■■■□□ 2.15
CCND3-204ENST00000414200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.46■■■□□ 2.154e-7■■□□□ 12.9
CCND3-204ENST00000414200 TTC37Q6PGP7 1564 aa28.43■■■□□ 2.14
CCND3-204ENST00000414200 ARAP3Q8WWN8 1544 aa28.41■■■□□ 2.14
CCND3-204ENST00000414200 CDK11AQ9UQ88 783 aaPredicted RBP28.4■■■□□ 2.14
CCND3-204ENST00000414200 PHLDB1Q86UU1 1377 aa28.4■■■□□ 2.14
CCND3-204ENST00000414200 NEO1Q92859 1461 aa28.39■■■□□ 2.13
CCND3-204ENST00000414200 KDM4FA0A1W2PPD8 638 aa28.38■■■□□ 2.13
CCND3-204ENST00000414200 RAPGEF3O95398 923 aa28.36■■■□□ 2.13
CCND3-204ENST00000414200 KIF14Q15058 1648 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms