RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RUSC2Q8N2Y8 1516 aa45■■■■■ 4.79
VEGFA-207ENST00000413642 PRG4Q92954 1404 aaPredicted RBP44.99■■■■■ 4.79
VEGFA-207ENST00000413642 TRHP20396 242 aaPredicted RBP44.88■■■■■ 4.78
VEGFA-207ENST00000413642 KIAA0586Q9BVV6 1533 aa44.87■■■■■ 4.77
VEGFA-207ENST00000413642 RAPGEF2Q9Y4G8 1499 aa44.67■■■■■ 4.74
VEGFA-207ENST00000413642 IQGAP2Q13576 1575 aa44.5■■■■■ 4.71
VEGFA-207ENST00000413642 TTBK1Q5TCY1 1321 aaPredicted RBP44.45■■■■■ 4.71
VEGFA-207ENST00000413642 PRXQ9BXM0 1461 aa44.41■■■■■ 4.7
VEGFA-207ENST00000413642 CARMIL2Q6F5E8 1435 aa44.39■■■■■ 4.7
VEGFA-207ENST00000413642 PTPRGP23470 1445 aa44.38■■■■■ 4.69
VEGFA-207ENST00000413642 TNIKQ9UKE5 1360 aa44.33■■■■■ 4.69
VEGFA-207ENST00000413642 CSRNP3Q8WYN3 585 aa44.32■■■■■ 4.69
VEGFA-207ENST00000413642 DISP1Q96F81 1524 aa44.32■■■■■ 4.69
VEGFA-207ENST00000413642 ADCY10Q96PN6 1610 aa44.3■■■■■ 4.68
VEGFA-207ENST00000413642 NPM1P06748 294 aaKnown RBP eCLIP44.27■■■■■ 4.68
VEGFA-207ENST00000413642 UGGT2Q9NYU1 1516 aa44.27■■■■■ 4.68
VEGFA-207ENST00000413642 CHIC1Q5VXU3 224 aa44.21■■■■■ 4.67
VEGFA-207ENST00000413642 FAM9AQ8IZU1 332 aaPredicted RBP44.21■■■■■ 4.67
VEGFA-207ENST00000413642 CTTNBP2Q8WZ74 1663 aa44.12■■■■■ 4.65
VEGFA-207ENST00000413642 EEA1Q15075 1411 aa44.11■■■■■ 4.65
VEGFA-207ENST00000413642 KIAA0556O60303 1618 aa44.1■■■■■ 4.65
VEGFA-207ENST00000413642 MAPKBP1O60336 1514 aa44.06■■■■■ 4.64
VEGFA-207ENST00000413642 UACAQ9BZF9 1416 aa44.03■■■■■ 4.64
VEGFA-207ENST00000413642 FAM69CQ0P6D2 419 aa44.02■■■■■ 4.64
VEGFA-207ENST00000413642 ABCC10Q5T3U5 1492 aa43.99■■■■■ 4.63
VEGFA-207ENST00000413642 ABCC2Q92887 1545 aa43.99■■■■■ 4.63
VEGFA-207ENST00000413642 UHRF1BP1LA0JNW5 1464 aa43.97■■■■■ 4.63
VEGFA-207ENST00000413642 KIF13AQ9H1H9 1805 aa43.95■■■■■ 4.63
VEGFA-207ENST00000413642 GOLGA3Q08378 1498 aa43.95■■■■■ 4.63
VEGFA-207ENST00000413642 P3H3Q8IVL6 736 aa43.87■■■■■ 4.61
VEGFA-207ENST00000413642 DIP2BQ9P265 1576 aa43.87■■■■■ 4.61
VEGFA-207ENST00000413642 PLB1Q6P1J6 1458 aa43.83■■■■■ 4.61
VEGFA-207ENST00000413642 ASXL2Q76L83 1435 aa43.81■■■■■ 4.6
VEGFA-207ENST00000413642 KDM5BQ9UGL1 1544 aa43.78■■■■■ 4.6
VEGFA-207ENST00000413642 RANGAP1P46060 587 aaPredicted RBP43.77■■■■■ 4.6
VEGFA-207ENST00000413642 EHMT2Q96KQ7 1210 aa43.75■■■■■ 4.59
VEGFA-207ENST00000413642 KIF21BO75037 1637 aa43.7■■■■■ 4.59
VEGFA-207ENST00000413642 ABCA8O94911 1581 aa43.68■■■■■ 4.58
VEGFA-207ENST00000413642 ZCCHC11Q5TAX3 1644 aaKnown RBP43.66■■■■■ 4.58
VEGFA-207ENST00000413642 SAMD9Q5K651 1589 aa43.63■■■■■ 4.57
VEGFA-207ENST00000413642 ARID3CA6NKF2 412 aa43.55■■■■■ 4.56
VEGFA-207ENST00000413642 EPRSP07814 1512 aaKnown RBP43.53■■■■■ 4.56
VEGFA-207ENST00000413642 UBTFP17480 764 aaKnown RBP43.52■■■■■ 4.56
VEGFA-207ENST00000413642 GLI2P10070 1586 aa43.5■■■■■ 4.55
VEGFA-207ENST00000413642 FHOD3Q2V2M9 1422 aa43.49■■■■■ 4.55
VEGFA-207ENST00000413642 TSPOAP1O95153 1857 aa43.48■■■■■ 4.55
VEGFA-207ENST00000413642 WDR7Q9Y4E6 1490 aa43.45■■■■■ 4.55
VEGFA-207ENST00000413642 KCNH8Q96L42 1107 aa43.39■■■■■ 4.54
VEGFA-207ENST00000413642 ATP10BO94823 1461 aa43.38■■■■■ 4.54
VEGFA-207ENST00000413642 PPRC1Q5VV67 1664 aaKnown RBP43.32■■■■■ 4.53
VEGFA-207ENST00000413642 RAPGEF6Q8TEU7 1601 aa43.31■■■■■ 4.52
VEGFA-207ENST00000413642 EFCAB5A4FU69 1503 aa43.3■■■■■ 4.52
VEGFA-207ENST00000413642 KDM6BO15054 1643 aa43.29■■■■■ 4.52
VEGFA-207ENST00000413642 MAP3K4Q9Y6R4 1608 aa43.28■■■■■ 4.52
VEGFA-207ENST00000413642 NUP153P49790 1475 aaKnown RBP43.24■■■■■ 4.51
VEGFA-207ENST00000413642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.23■■■■■ 4.51
VEGFA-207ENST00000413642 HNRNPUL2Q1KMD3 747 aaKnown RBP43.23■■■■■ 4.51
VEGFA-207ENST00000413642 CD109Q6YHK3 1445 aa43.15■■■■■ 4.5
VEGFA-207ENST00000413642 ARHGAP35Q9NRY4 1499 aa43.15■■■■■ 4.5
VEGFA-207ENST00000413642 COL17A1Q9UMD9 1497 aaPredicted RBP43.13■■■■■ 4.49
VEGFA-207ENST00000413642 TEX14Q8IWB6 1497 aa43.12■■■■■ 4.49
VEGFA-207ENST00000413642 MAGI3Q5TCQ9 1506 aa43.03■■■■■ 4.48
VEGFA-207ENST00000413642 CFAP43Q8NDM7 1665 aa43.02■■■■■ 4.48
VEGFA-207ENST00000413642 ATP1B4Q9UN42 357 aaPredicted RBP42.97■■■■■ 4.47
VEGFA-207ENST00000413642 PLEKHD1A6NEE1 506 aa42.96■■■■■ 4.47
VEGFA-207ENST00000413642 FMN1Q68DA7 1419 aa42.96■■■■■ 4.47
VEGFA-207ENST00000413642 AEBP2Q6ZN18 517 aaPredicted RBP42.93■■■■■ 4.46
VEGFA-207ENST00000413642 CDK13Q14004 1512 aaKnown RBP42.92■■■■■ 4.46
VEGFA-207ENST00000413642 ABCA9Q8IUA7 1624 aa42.89■■■■■ 4.46
VEGFA-207ENST00000413642 HECW1Q76N89 1606 aa42.77■■■■■ 4.44
VEGFA-207ENST00000413642 CLIP1P30622 1438 aa42.73■■■■■ 4.43
VEGFA-207ENST00000413642 KDM4FA0A1W2PPD8 638 aa42.71■■■■■ 4.43
VEGFA-207ENST00000413642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.68■■■■■ 4.422e-6■■□□□ 11.9
VEGFA-207ENST00000413642 ARAP3Q8WWN8 1544 aa42.67■■■■■ 4.42
VEGFA-207ENST00000413642 NEO1Q92859 1461 aa42.62■■■■■ 4.41
VEGFA-207ENST00000413642 PHLDB1Q86UU1 1377 aa42.62■■■■■ 4.41
VEGFA-207ENST00000413642 CASKIN1Q8WXD9 1431 aa42.62■■■■■ 4.41
VEGFA-207ENST00000413642 TTC37Q6PGP7 1564 aa42.61■■■■■ 4.41
VEGFA-207ENST00000413642 RAPGEF3O95398 923 aa42.6■■■■■ 4.41
VEGFA-207ENST00000413642 CDK11AQ9UQ88 783 aaPredicted RBP42.6■■■■■ 4.41
VEGFA-207ENST00000413642 PCF11O94913 1555 aaKnown RBP42.6■■■■■ 4.41
VEGFA-207ENST00000413642 LRRIQ1Q96JM4 1722 aa42.54■■■■■ 4.4
VEGFA-207ENST00000413642 TROQ12816 1431 aaPredicted RBP42.51■■■■■ 4.4
VEGFA-207ENST00000413642 FANCAO15360 1455 aa42.49■■■■■ 4.39
VEGFA-207ENST00000413642 LOC105371045A0A1W2PR82 267 aa42.49■■■■■ 4.39
VEGFA-207ENST00000413642 AKNAQ7Z591 1439 aa42.48■■■■■ 4.39
VEGFA-207ENST00000413642 ADGRL1O94910 1474 aa42.45■■■■■ 4.39
VEGFA-207ENST00000413642 KIF14Q15058 1648 aa42.45■■■■■ 4.39
VEGFA-207ENST00000413642 PLCH2O75038 1416 aa42.45■■■■■ 4.39
VEGFA-207ENST00000413642 FYCO1Q9BQS8 1478 aa42.43■■■■■ 4.38
VEGFA-207ENST00000413642 CEP162Q5TB80 1403 aa42.42■■■■■ 4.38
VEGFA-207ENST00000413642 CCDC18Q5T9S5 1454 aa42.42■■■■■ 4.38
VEGFA-207ENST00000413642 FRMPD1Q5SYB0 1578 aa42.39■■■■■ 4.38
VEGFA-207ENST00000413642 DENND4BO75064 1496 aaPredicted RBP42.37■■■■■ 4.37
VEGFA-207ENST00000413642 CFAP74Q9C0B2 1584 aa42.31■■■■■ 4.36
VEGFA-207ENST00000413642 EFCAB2Q5VUJ9 269 aa42.3■■■■■ 4.36
VEGFA-207ENST00000413642 SCAPERQ9BY12 1400 aa42.27■■■■■ 4.36
VEGFA-207ENST00000413642 MYO5CQ9NQX4 1742 aa42.23■■■■■ 4.35
VEGFA-207ENST00000413642 RICTORQ6R327 1708 aa42.21■■■■■ 4.35
VEGFA-207ENST00000413642 ARHGAP5Q13017 1502 aa42.19■■■■■ 4.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms