RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CUL7Q14999 1698 aa13.47□□□□□ -0.25
HMGN1P34-201ENST00000413023 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
HMGN1P34-201ENST00000413023 FHAD1B1AJZ9 1412 aa13.46□□□□□ -0.26
HMGN1P34-201ENST00000413023 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
HMGN1P34-201ENST00000413023 PBRM1Q86U86 1689 aa13.4□□□□□ -0.26
HMGN1P34-201ENST00000413023 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
HMGN1P34-201ENST00000413023 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
HMGN1P34-201ENST00000413023 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
HMGN1P34-201ENST00000413023 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
HMGN1P34-201ENST00000413023 FHOD3Q2V2M9 1422 aa13.36□□□□□ -0.27
HMGN1P34-201ENST00000413023 APLP2Q06481 763 aa13.35□□□□□ -0.27
HMGN1P34-201ENST00000413023 HRCP23327 699 aa13.33□□□□□ -0.28
HMGN1P34-201ENST00000413023 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
HMGN1P34-201ENST00000413023 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
HMGN1P34-201ENST00000413023 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
HMGN1P34-201ENST00000413023 FBLN2P98095 1184 aa13.31□□□□□ -0.28
HMGN1P34-201ENST00000413023 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
HMGN1P34-201ENST00000413023 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
HMGN1P34-201ENST00000413023 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
HMGN1P34-201ENST00000413023 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
HMGN1P34-201ENST00000413023 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
HMGN1P34-201ENST00000413023 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P34-201ENST00000413023 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
HMGN1P34-201ENST00000413023 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
HMGN1P34-201ENST00000413023 NUP160Q12769 1436 aa13.24□□□□□ -0.29
HMGN1P34-201ENST00000413023 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
HMGN1P34-201ENST00000413023 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
HMGN1P34-201ENST00000413023 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
HMGN1P34-201ENST00000413023 JPH4Q96JJ6 628 aa13.23□□□□□ -0.29
HMGN1P34-201ENST00000413023 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
HMGN1P34-201ENST00000413023 DISP1Q96F81 1524 aa13.22□□□□□ -0.29
HMGN1P34-201ENST00000413023 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
HMGN1P34-201ENST00000413023 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
HMGN1P34-201ENST00000413023 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
HMGN1P34-201ENST00000413023 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
HMGN1P34-201ENST00000413023 FYCO1Q9BQS8 1478 aa13.18□□□□□ -0.3
HMGN1P34-201ENST00000413023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
HMGN1P34-201ENST00000413023 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
HMGN1P34-201ENST00000413023 RRBP1Q9P2E9 1410 aaKnown RBP13.14□□□□□ -0.31
HMGN1P34-201ENST00000413023 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
HMGN1P34-201ENST00000413023 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
HMGN1P34-201ENST00000413023 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
HMGN1P34-201ENST00000413023 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
HMGN1P34-201ENST00000413023 CFAP43Q8NDM7 1665 aa13.1□□□□□ -0.31
HMGN1P34-201ENST00000413023 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
HMGN1P34-201ENST00000413023 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
HMGN1P34-201ENST00000413023 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
HMGN1P34-201ENST00000413023 NUP153P49790 1475 aaKnown RBP13.06□□□□□ -0.32
HMGN1P34-201ENST00000413023 PLB1Q6P1J6 1458 aa13.06□□□□□ -0.32
HMGN1P34-201ENST00000413023 CHD1O14646 1710 aa13.06□□□□□ -0.32
HMGN1P34-201ENST00000413023 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
HMGN1P34-201ENST00000413023 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
HMGN1P34-201ENST00000413023 ITGAEP38570 1179 aa13.05□□□□□ -0.32
HMGN1P34-201ENST00000413023 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
HMGN1P34-201ENST00000413023 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
HMGN1P34-201ENST00000413023 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
HMGN1P34-201ENST00000413023 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
HMGN1P34-201ENST00000413023 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
HMGN1P34-201ENST00000413023 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
HMGN1P34-201ENST00000413023 PTPRGP23470 1445 aa13.01□□□□□ -0.33
HMGN1P34-201ENST00000413023 ERCC6L2Q5T890 1561 aa13.01□□□□□ -0.33
HMGN1P34-201ENST00000413023 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
HMGN1P34-201ENST00000413023 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
HMGN1P34-201ENST00000413023 ARHGEF11O15085 1522 aa13□□□□□ -0.33
HMGN1P34-201ENST00000413023 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
HMGN1P34-201ENST00000413023 ABCA8O94911 1581 aa12.98□□□□□ -0.33
HMGN1P34-201ENST00000413023 CLASP1Q7Z460 1538 aa12.98□□□□□ -0.33
HMGN1P34-201ENST00000413023 ATP10BO94823 1461 aa12.97□□□□□ -0.33
HMGN1P34-201ENST00000413023 FGD6Q6ZV73 1430 aa12.97□□□□□ -0.33
HMGN1P34-201ENST00000413023 EHBP1L1Q8N3D4 1523 aa12.97□□□□□ -0.33
HMGN1P34-201ENST00000413023 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
HMGN1P34-201ENST00000413023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
HMGN1P34-201ENST00000413023 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.34
HMGN1P34-201ENST00000413023 ZNF644Q9H582 1327 aaPredicted RBP12.92□□□□□ -0.34
HMGN1P34-201ENST00000413023 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
HMGN1P34-201ENST00000413023 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
HMGN1P34-201ENST00000413023 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
HMGN1P34-201ENST00000413023 TROQ12816 1431 aaPredicted RBP12.91□□□□□ -0.34
HMGN1P34-201ENST00000413023 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
HMGN1P34-201ENST00000413023 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
HMGN1P34-201ENST00000413023 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
HMGN1P34-201ENST00000413023 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
HMGN1P34-201ENST00000413023 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
HMGN1P34-201ENST00000413023 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
HMGN1P34-201ENST00000413023 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
HMGN1P34-201ENST00000413023 PTPN23Q9H3S7 1636 aa12.85□□□□□ -0.35
HMGN1P34-201ENST00000413023 GPATCH8Q9UKJ3 1502 aaKnown RBP12.85□□□□□ -0.35
HMGN1P34-201ENST00000413023 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
HMGN1P34-201ENST00000413023 ABCC10Q5T3U5 1492 aa12.85□□□□□ -0.35
HMGN1P34-201ENST00000413023 KIF14Q15058 1648 aa12.84□□□□□ -0.35
HMGN1P34-201ENST00000413023 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
HMGN1P34-201ENST00000413023 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
HMGN1P34-201ENST00000413023 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
HMGN1P34-201ENST00000413023 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
HMGN1P34-201ENST00000413023 ABCC5O15440 1437 aa12.8□□□□□ -0.36
HMGN1P34-201ENST00000413023 NAIPQ13075 1403 aa12.79□□□□□ -0.36
HMGN1P34-201ENST00000413023 FOXD1Q16676 465 aa12.79□□□□□ -0.36
HMGN1P34-201ENST00000413023 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
HMGN1P34-201ENST00000413023 ZNF777Q9ULD5 760 aaPredicted RBP12.79□□□□□ -0.36
HMGN1P34-201ENST00000413023 ADCY10Q96PN6 1610 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms