RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 EFCAB5A4FU69 1503 aa26.54■■□□□ 1.84
CROCCP2-202ENST00000412962 P3H3Q8IVL6 736 aa26.52■■□□□ 1.84
CROCCP2-202ENST00000412962 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
CROCCP2-202ENST00000412962 FHAD1B1AJZ9 1412 aa26.51■■□□□ 1.83
CROCCP2-202ENST00000412962 TIAM1Q13009 1591 aa26.5■■□□□ 1.83
CROCCP2-202ENST00000412962 FHOD3Q2V2M9 1422 aa26.5■■□□□ 1.83
CROCCP2-202ENST00000412962 WDR62O43379 1518 aa26.49■■□□□ 1.83
CROCCP2-202ENST00000412962 MAP3K1Q13233 1512 aa26.47■■□□□ 1.83
CROCCP2-202ENST00000412962 PCF11O94913 1555 aaKnown RBP26.47■■□□□ 1.83
CROCCP2-202ENST00000412962 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.834e-8■■■■■ 29.6
CROCCP2-202ENST00000412962 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
CROCCP2-202ENST00000412962 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
CROCCP2-202ENST00000412962 RRBP1Q9P2E9 1410 aaKnown RBP26.41■■□□□ 1.82
CROCCP2-202ENST00000412962 CFAP43Q8NDM7 1665 aa26.39■■□□□ 1.82
CROCCP2-202ENST00000412962 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
CROCCP2-202ENST00000412962 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
CROCCP2-202ENST00000412962 LRRC9Q6ZRR7 1453 aa26.37■■□□□ 1.81
CROCCP2-202ENST00000412962 FYCO1Q9BQS8 1478 aa26.37■■□□□ 1.81
CROCCP2-202ENST00000412962 SAMD9Q5K651 1589 aa26.37■■□□□ 1.81
CROCCP2-202ENST00000412962 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
CROCCP2-202ENST00000412962 CASKIN1Q8WXD9 1431 aa26.34■■□□□ 1.81
CROCCP2-202ENST00000412962 ATP1B4Q9UN42 357 aaPredicted RBP26.33■■□□□ 1.81
CROCCP2-202ENST00000412962 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
CROCCP2-202ENST00000412962 CCNB3Q8WWL7 1395 aa26.32■■□□□ 1.8
CROCCP2-202ENST00000412962 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
CROCCP2-202ENST00000412962 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.8
CROCCP2-202ENST00000412962 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
CROCCP2-202ENST00000412962 IQGAP2Q13576 1575 aa26.23■■□□□ 1.79
CROCCP2-202ENST00000412962 PHLDB1Q86UU1 1377 aa26.21■■□□□ 1.79
CROCCP2-202ENST00000412962 LRRIQ1Q96JM4 1722 aa26.15■■□□□ 1.78
CROCCP2-202ENST00000412962 ITGAEP38570 1179 aa26.13■■□□□ 1.77
CROCCP2-202ENST00000412962 SCAF1Q9H7N4 1312 aaKnown RBP26.13■■□□□ 1.77
CROCCP2-202ENST00000412962 GRIN2AQ12879 1464 aa26.08■■□□□ 1.77
CROCCP2-202ENST00000412962 UGGT2Q9NYU1 1516 aa26.07■■□□□ 1.76
CROCCP2-202ENST00000412962 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
CROCCP2-202ENST00000412962 MAGI1Q96QZ7 1491 aaPredicted RBP26.05■■□□□ 1.76
CROCCP2-202ENST00000412962 MTUS2Q5JR59 1369 aa26.05■■□□□ 1.76
CROCCP2-202ENST00000412962 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
CROCCP2-202ENST00000412962 FAM50AQ14320 339 aaKnown RBP26.03■■□□□ 1.76
CROCCP2-202ENST00000412962 HECW1Q76N89 1606 aa26■■□□□ 1.75
CROCCP2-202ENST00000412962 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
CROCCP2-202ENST00000412962 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
CROCCP2-202ENST00000412962 CLSPNQ9HAW4 1339 aa25.97■■□□□ 1.75
CROCCP2-202ENST00000412962 EHBP1L1Q8N3D4 1523 aa25.97■■□□□ 1.75
CROCCP2-202ENST00000412962 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
CROCCP2-202ENST00000412962 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
CROCCP2-202ENST00000412962 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
CROCCP2-202ENST00000412962 DISP1Q96F81 1524 aa25.94■■□□□ 1.74
CROCCP2-202ENST00000412962 SUPT6HQ7KZ85 1726 aaKnown RBP25.94■■□□□ 1.74
CROCCP2-202ENST00000412962 RAB3GAP2Q9H2M9 1393 aa25.94■■□□□ 1.74
CROCCP2-202ENST00000412962 NCOA2Q15596 1464 aa25.93■■□□□ 1.74
CROCCP2-202ENST00000412962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.92■■□□□ 1.744e-9■■□□□ 12.9
CROCCP2-202ENST00000412962 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
CROCCP2-202ENST00000412962 MAGI3Q5TCQ9 1506 aa25.91■■□□□ 1.74
CROCCP2-202ENST00000412962 EPRSP07814 1512 aaKnown RBP25.91■■□□□ 1.74
CROCCP2-202ENST00000412962 SETD5Q9C0A6 1442 aa25.9■■□□□ 1.74
CROCCP2-202ENST00000412962 FBLN2P98095 1184 aa25.89■■□□□ 1.74
CROCCP2-202ENST00000412962 CDK13Q14004 1512 aaKnown RBP25.87■■□□□ 1.73
CROCCP2-202ENST00000412962 MYOM3Q5VTT5 1437 aa25.86■■□□□ 1.73
CROCCP2-202ENST00000412962 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
CROCCP2-202ENST00000412962 NUP160Q12769 1436 aa25.82■■□□□ 1.72
CROCCP2-202ENST00000412962 ZNF316A6NFI3 1004 aaPredicted RBP25.81■■□□□ 1.72
CROCCP2-202ENST00000412962 ARID3CA6NKF2 412 aa25.8■■□□□ 1.72
CROCCP2-202ENST00000412962 RAPGEF6Q8TEU7 1601 aa25.78■■□□□ 1.72
CROCCP2-202ENST00000412962 DIEXFQ68CQ4 756 aaKnown RBP25.77■■□□□ 1.72
CROCCP2-202ENST00000412962 PTPN23Q9H3S7 1636 aa25.76■■□□□ 1.71
CROCCP2-202ENST00000412962 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
CROCCP2-202ENST00000412962 MAPKBP1O60336 1514 aa25.74■■□□□ 1.71
CROCCP2-202ENST00000412962 PTPRKQ15262 1439 aa25.71■■□□□ 1.71
CROCCP2-202ENST00000412962 JPH4Q96JJ6 628 aa25.7■■□□□ 1.71
CROCCP2-202ENST00000412962 CARMIL2Q6F5E8 1435 aa25.7■■□□□ 1.7
CROCCP2-202ENST00000412962 TCOF1Q13428 1488 aaKnown RBP25.66■■□□□ 1.7
CROCCP2-202ENST00000412962 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
CROCCP2-202ENST00000412962 HFM1A2PYH4 1435 aa25.64■■□□□ 1.7
CROCCP2-202ENST00000412962 MIA2Q96PC5 1412 aa25.62■■□□□ 1.69
CROCCP2-202ENST00000412962 CDK11AQ9UQ88 783 aaPredicted RBP25.59■■□□□ 1.69
CROCCP2-202ENST00000412962 CHD1O14646 1710 aa25.58■■□□□ 1.69
CROCCP2-202ENST00000412962 NAIPQ13075 1403 aa25.57■■□□□ 1.68
CROCCP2-202ENST00000412962 TROQ12816 1431 aaPredicted RBP25.53■■□□□ 1.68
CROCCP2-202ENST00000412962 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
CROCCP2-202ENST00000412962 ABCA8O94911 1581 aa25.51■■□□□ 1.67
CROCCP2-202ENST00000412962 UACAQ9BZF9 1416 aa25.49■■□□□ 1.67
CROCCP2-202ENST00000412962 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
CROCCP2-202ENST00000412962 CHIC2Q9UKJ5 165 aa25.49■■□□□ 1.67
CROCCP2-202ENST00000412962 GCC2Q8IWJ2 1684 aa25.49■■□□□ 1.67
CROCCP2-202ENST00000412962 MYT1Q01538 1121 aa25.48■■□□□ 1.67
CROCCP2-202ENST00000412962 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
CROCCP2-202ENST00000412962 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
CROCCP2-202ENST00000412962 ADCY10Q96PN6 1610 aa25.46■■□□□ 1.67
CROCCP2-202ENST00000412962 KIF14Q15058 1648 aa25.45■■□□□ 1.66
CROCCP2-202ENST00000412962 AKNAQ7Z591 1439 aa25.45■■□□□ 1.66
CROCCP2-202ENST00000412962 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
CROCCP2-202ENST00000412962 DNMT1P26358 1616 aaKnown RBP25.41■■□□□ 1.66
CROCCP2-202ENST00000412962 DAPK1P53355 1430 aa25.41■■□□□ 1.66
CROCCP2-202ENST00000412962 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
CROCCP2-202ENST00000412962 PTPRGP23470 1445 aa25.4■■□□□ 1.66
CROCCP2-202ENST00000412962 ATP10BO94823 1461 aa25.39■■□□□ 1.66
CROCCP2-202ENST00000412962 SHROOM2Q13796 1616 aa25.39■■□□□ 1.65
CROCCP2-202ENST00000412962 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
CROCCP2-202ENST00000412962 KDM6BO15054 1643 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms