RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 ADCY10Q96PN6 1610 aa23.18■■□□□ 1.3
PTPRN-203ENST00000412847 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
PTPRN-203ENST00000412847 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
PTPRN-203ENST00000412847 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
PTPRN-203ENST00000412847 CUL7Q14999 1698 aa23.14■■□□□ 1.29
PTPRN-203ENST00000412847 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
PTPRN-203ENST00000412847 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
PTPRN-203ENST00000412847 KDM6BO15054 1643 aa23.07■■□□□ 1.28
PTPRN-203ENST00000412847 NPM1P06748 294 aaKnown RBP eCLIP23.04■■□□□ 1.28
PTPRN-203ENST00000412847 KIAA0586Q9BVV6 1533 aa23.03■■□□□ 1.28
PTPRN-203ENST00000412847 FAM69CQ0P6D2 419 aa23.03■■□□□ 1.28
PTPRN-203ENST00000412847 KIF27Q86VH2 1401 aa22.96■■□□□ 1.27
PTPRN-203ENST00000412847 IGF1RP08069 1367 aa22.91■■□□□ 1.26
PTPRN-203ENST00000412847 PPRC1Q5VV67 1664 aaKnown RBP22.89■■□□□ 1.25
PTPRN-203ENST00000412847 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
PTPRN-203ENST00000412847 PTPRGP23470 1445 aa22.83■■□□□ 1.25
PTPRN-203ENST00000412847 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
PTPRN-203ENST00000412847 GLI2P10070 1586 aa22.82■■□□□ 1.24
PTPRN-203ENST00000412847 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
PTPRN-203ENST00000412847 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
PTPRN-203ENST00000412847 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
PTPRN-203ENST00000412847 KDM4FA0A1W2PPD8 638 aa22.77■■□□□ 1.24
PTPRN-203ENST00000412847 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
PTPRN-203ENST00000412847 ASXL2Q76L83 1435 aa22.75■■□□□ 1.23
PTPRN-203ENST00000412847 UHRF1BP1LA0JNW5 1464 aa22.75■■□□□ 1.23
PTPRN-203ENST00000412847 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
PTPRN-203ENST00000412847 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
PTPRN-203ENST00000412847 ZCCHC11Q5TAX3 1644 aaKnown RBP22.73■■□□□ 1.23
PTPRN-203ENST00000412847 DISP1Q96F81 1524 aa22.71■■□□□ 1.23
PTPRN-203ENST00000412847 CTTNBP2Q8WZ74 1663 aa22.69■■□□□ 1.22
PTPRN-203ENST00000412847 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
PTPRN-203ENST00000412847 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
PTPRN-203ENST00000412847 UGGT2Q9NYU1 1516 aa22.67■■□□□ 1.22
PTPRN-203ENST00000412847 KDM5BQ9UGL1 1544 aa22.65■■□□□ 1.22
PTPRN-203ENST00000412847 ADGRL1O94910 1474 aa22.65■■□□□ 1.22
PTPRN-203ENST00000412847 EPRSP07814 1512 aaKnown RBP22.64■■□□□ 1.21
PTPRN-203ENST00000412847 TEX14Q8IWB6 1497 aa22.61■■□□□ 1.21
PTPRN-203ENST00000412847 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
PTPRN-203ENST00000412847 COL17A1Q9UMD9 1497 aaPredicted RBP22.56■■□□□ 1.2
PTPRN-203ENST00000412847 CFAP43Q8NDM7 1665 aa22.55■■□□□ 1.2
PTPRN-203ENST00000412847 WDR7Q9Y4E6 1490 aa22.51■■□□□ 1.19
PTPRN-203ENST00000412847 HECW2Q9P2P5 1572 aa22.49■■□□□ 1.19
PTPRN-203ENST00000412847 ABCA8O94911 1581 aa22.46■■□□□ 1.19
PTPRN-203ENST00000412847 GOLGA3Q08378 1498 aa22.43■■□□□ 1.18
PTPRN-203ENST00000412847 ILDR1Q86SU0 546 aaPredicted RBP22.41■■□□□ 1.18
PTPRN-203ENST00000412847 MAGI3Q5TCQ9 1506 aa22.41■■□□□ 1.18
PTPRN-203ENST00000412847 KIF21BO75037 1637 aa22.4■■□□□ 1.18
PTPRN-203ENST00000412847 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
PTPRN-203ENST00000412847 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
PTPRN-203ENST00000412847 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
PTPRN-203ENST00000412847 ABCA9Q8IUA7 1624 aa22.27■■□□□ 1.16
PTPRN-203ENST00000412847 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
PTPRN-203ENST00000412847 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
PTPRN-203ENST00000412847 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.15
PTPRN-203ENST00000412847 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.14
PTPRN-203ENST00000412847 ATP10BO94823 1461 aa22.18■■□□□ 1.14
PTPRN-203ENST00000412847 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.14
PTPRN-203ENST00000412847 FRMPD1Q5SYB0 1578 aa22.13■■□□□ 1.13
PTPRN-203ENST00000412847 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
PTPRN-203ENST00000412847 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
PTPRN-203ENST00000412847 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
PTPRN-203ENST00000412847 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
PTPRN-203ENST00000412847 NEO1Q92859 1461 aa22.09■■□□□ 1.13
PTPRN-203ENST00000412847 P3H3Q8IVL6 736 aa22.09■■□□□ 1.13
PTPRN-203ENST00000412847 PTPRMP28827 1452 aa22.09■■□□□ 1.13
PTPRN-203ENST00000412847 RICTORQ6R327 1708 aa22.08■■□□□ 1.12
PTPRN-203ENST00000412847 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
PTPRN-203ENST00000412847 RIMS1Q86UR5 1692 aaKnown RBP22.04■■□□□ 1.12
PTPRN-203ENST00000412847 ARHGEF40Q8TER5 1519 aa22.04■■□□□ 1.12
PTPRN-203ENST00000412847 NUP153P49790 1475 aaKnown RBP22.02■■□□□ 1.12
PTPRN-203ENST00000412847 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
PTPRN-203ENST00000412847 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
PTPRN-203ENST00000412847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
PTPRN-203ENST00000412847 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
PTPRN-203ENST00000412847 FHOD3Q2V2M9 1422 aa21.94■■□□□ 1.1
PTPRN-203ENST00000412847 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
PTPRN-203ENST00000412847 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
PTPRN-203ENST00000412847 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
PTPRN-203ENST00000412847 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
PTPRN-203ENST00000412847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.92■■□□□ 1.1
PTPRN-203ENST00000412847 LMTK3Q96Q04 1460 aa21.92■■□□□ 1.1
PTPRN-203ENST00000412847 FER1L4A9Z1Z3 1794 aa21.92■■□□□ 1.1
PTPRN-203ENST00000412847 ZMYM4Q5VZL5 1548 aa21.91■■□□□ 1.1
PTPRN-203ENST00000412847 DENND4BO75064 1496 aaPredicted RBP21.91■■□□□ 1.1
PTPRN-203ENST00000412847 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
PTPRN-203ENST00000412847 ARID4BQ4LE39 1312 aaPredicted RBP21.9■■□□□ 1.1
PTPRN-203ENST00000412847 FANCAO15360 1455 aa21.9■■□□□ 1.1
PTPRN-203ENST00000412847 EEA1Q15075 1411 aa21.89■■□□□ 1.09
PTPRN-203ENST00000412847 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
PTPRN-203ENST00000412847 ZFYVE16Q7Z3T8 1539 aa21.87■■□□□ 1.09
PTPRN-203ENST00000412847 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
PTPRN-203ENST00000412847 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
PTPRN-203ENST00000412847 PLEKHD1A6NEE1 506 aa21.83■■□□□ 1.09
PTPRN-203ENST00000412847 HECW1Q76N89 1606 aa21.83■■□□□ 1.08
PTPRN-203ENST00000412847 POGZQ7Z3K3 1410 aa21.81■■□□□ 1.08
PTPRN-203ENST00000412847 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
PTPRN-203ENST00000412847 MAGI2Q86UL8 1455 aa21.78■■□□□ 1.08
PTPRN-203ENST00000412847 YEATS2Q9ULM3 1422 aa21.78■■□□□ 1.08
PTPRN-203ENST00000412847 PREX1Q8TCU6 1659 aa21.77■■□□□ 1.08
PTPRN-203ENST00000412847 LRRIQ1Q96JM4 1722 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms