RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
NR1I3-208ENST00000412844 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
NR1I3-208ENST00000412844 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
NR1I3-208ENST00000412844 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
NR1I3-208ENST00000412844 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
NR1I3-208ENST00000412844 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
NR1I3-208ENST00000412844 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
NR1I3-208ENST00000412844 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
NR1I3-208ENST00000412844 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
NR1I3-208ENST00000412844 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
NR1I3-208ENST00000412844 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
NR1I3-208ENST00000412844 NESP48681 1621 aa13.23□□□□□ -0.29
NR1I3-208ENST00000412844 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
NR1I3-208ENST00000412844 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
NR1I3-208ENST00000412844 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
NR1I3-208ENST00000412844 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
NR1I3-208ENST00000412844 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
NR1I3-208ENST00000412844 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
NR1I3-208ENST00000412844 PKD2Q13563 968 aa13.14□□□□□ -0.31
NR1I3-208ENST00000412844 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
NR1I3-208ENST00000412844 GSE1Q14687 1217 aa13.11□□□□□ -0.31
NR1I3-208ENST00000412844 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
NR1I3-208ENST00000412844 NUBP1P53384 320 aa13.1□□□□□ -0.31
NR1I3-208ENST00000412844 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
NR1I3-208ENST00000412844 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
NR1I3-208ENST00000412844 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
NR1I3-208ENST00000412844 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
NR1I3-208ENST00000412844 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
NR1I3-208ENST00000412844 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
NR1I3-208ENST00000412844 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
NR1I3-208ENST00000412844 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
NR1I3-208ENST00000412844 WDR62O43379 1518 aa13.04□□□□□ -0.32
NR1I3-208ENST00000412844 MROH2BQ7Z745 1585 aa13.01□□□□□ -0.33
NR1I3-208ENST00000412844 RASEFQ8IZ41 740 aa13□□□□□ -0.33
NR1I3-208ENST00000412844 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
NR1I3-208ENST00000412844 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
NR1I3-208ENST00000412844 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
NR1I3-208ENST00000412844 RGL2O15211 777 aa12.9□□□□□ -0.34
NR1I3-208ENST00000412844 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
NR1I3-208ENST00000412844 CFTRP13569 1480 aa12.86□□□□□ -0.35
NR1I3-208ENST00000412844 PYGBP11216 843 aa12.85□□□□□ -0.35
NR1I3-208ENST00000412844 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
NR1I3-208ENST00000412844 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-208ENST00000412844 WIZO95785 1651 aa12.82□□□□□ -0.36
NR1I3-208ENST00000412844 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
NR1I3-208ENST00000412844 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
NR1I3-208ENST00000412844 CCDC61Q9Y6R9 512 aa12.77□□□□□ -0.37
NR1I3-208ENST00000412844 RNF25Q96BH1 459 aaPredicted RBP12.76□□□□□ -0.37
NR1I3-208ENST00000412844 ZRANB1Q9UGI0 708 aa12.76□□□□□ -0.37
NR1I3-208ENST00000412844 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
NR1I3-208ENST00000412844 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
NR1I3-208ENST00000412844 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
NR1I3-208ENST00000412844 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
NR1I3-208ENST00000412844 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
NR1I3-208ENST00000412844 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
NR1I3-208ENST00000412844 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
NR1I3-208ENST00000412844 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
NR1I3-208ENST00000412844 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
NR1I3-208ENST00000412844 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
NR1I3-208ENST00000412844 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-208ENST00000412844 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
NR1I3-208ENST00000412844 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
NR1I3-208ENST00000412844 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
NR1I3-208ENST00000412844 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-208ENST00000412844 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
NR1I3-208ENST00000412844 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
NR1I3-208ENST00000412844 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-208ENST00000412844 HAX1O00165 279 aa12.66□□□□□ -0.38
NR1I3-208ENST00000412844 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
NR1I3-208ENST00000412844 STK25O00506 426 aa12.65□□□□□ -0.38
NR1I3-208ENST00000412844 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
NR1I3-208ENST00000412844 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
NR1I3-208ENST00000412844 ZNF579Q8NAF0 562 aaKnown RBP12.63□□□□□ -0.39
NR1I3-208ENST00000412844 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
NR1I3-208ENST00000412844 MAP3K13O43283 966 aa12.62□□□□□ -0.39
NR1I3-208ENST00000412844 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
NR1I3-208ENST00000412844 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-208ENST00000412844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.61□□□□□ -0.39
NR1I3-208ENST00000412844 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
NR1I3-208ENST00000412844 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
NR1I3-208ENST00000412844 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
NR1I3-208ENST00000412844 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
NR1I3-208ENST00000412844 STK24Q9Y6E0 443 aa12.59□□□□□ -0.39
NR1I3-208ENST00000412844 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
NR1I3-208ENST00000412844 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
NR1I3-208ENST00000412844 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-208ENST00000412844 DNMBPQ6XZF7 1577 aa12.57□□□□□ -0.4
NR1I3-208ENST00000412844 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
NR1I3-208ENST00000412844 PSEN1P49768 467 aa12.55□□□□□ -0.4
NR1I3-208ENST00000412844 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
NR1I3-208ENST00000412844 POTEHQ6S545 545 aa12.54□□□□□ -0.4
NR1I3-208ENST00000412844 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
NR1I3-208ENST00000412844 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
NR1I3-208ENST00000412844 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
NR1I3-208ENST00000412844 CHD1O14646 1710 aa12.52□□□□□ -0.41
NR1I3-208ENST00000412844 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
NR1I3-208ENST00000412844 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
NR1I3-208ENST00000412844 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
NR1I3-208ENST00000412844 CLCN6P51797 869 aa12.5□□□□□ -0.41
NR1I3-208ENST00000412844 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms