RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
RBM39-207ENST00000412738 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
RBM39-207ENST00000412738 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.37
RBM39-207ENST00000412738 KIAA0586Q9BVV6 1533 aa23.54■■□□□ 1.36
RBM39-207ENST00000412738 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
RBM39-207ENST00000412738 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.34
RBM39-207ENST00000412738 IQGAP2Q13576 1575 aa23.36■■□□□ 1.33
RBM39-207ENST00000412738 CARMIL2Q6F5E8 1435 aa23.36■■□□□ 1.33
RBM39-207ENST00000412738 TTBK1Q5TCY1 1321 aaPredicted RBP23.33■■□□□ 1.33
RBM39-207ENST00000412738 PTPRGP23470 1445 aa23.31■■□□□ 1.32
RBM39-207ENST00000412738 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
RBM39-207ENST00000412738 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
RBM39-207ENST00000412738 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
RBM39-207ENST00000412738 FAM69CQ0P6D2 419 aa23.21■■□□□ 1.31
RBM39-207ENST00000412738 KIF13AQ9H1H9 1805 aa23.2■■□□□ 1.3
RBM39-207ENST00000412738 DISP1Q96F81 1524 aa23.19■■□□□ 1.3
RBM39-207ENST00000412738 UGGT2Q9NYU1 1516 aa23.19■■□□□ 1.3
RBM39-207ENST00000412738 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
RBM39-207ENST00000412738 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
RBM39-207ENST00000412738 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
RBM39-207ENST00000412738 UACAQ9BZF9 1416 aa23.14■■□□□ 1.29
RBM39-207ENST00000412738 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
RBM39-207ENST00000412738 ABCC2Q92887 1545 aa23.13■■□□□ 1.29
RBM39-207ENST00000412738 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
RBM39-207ENST00000412738 DIP2BQ9P265 1576 aa23.11■■□□□ 1.29
RBM39-207ENST00000412738 UHRF1BP1LA0JNW5 1464 aa23.1■■□□□ 1.29
RBM39-207ENST00000412738 GOLGA3Q08378 1498 aa23.1■■□□□ 1.29
RBM39-207ENST00000412738 EEA1Q15075 1411 aa23.06■■□□□ 1.28
RBM39-207ENST00000412738 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
RBM39-207ENST00000412738 PLB1Q6P1J6 1458 aa23.03■■□□□ 1.28
RBM39-207ENST00000412738 ASXL2Q76L83 1435 aa23.02■■□□□ 1.28
RBM39-207ENST00000412738 KDM5BQ9UGL1 1544 aa22.99■■□□□ 1.27
RBM39-207ENST00000412738 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
RBM39-207ENST00000412738 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
RBM39-207ENST00000412738 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
RBM39-207ENST00000412738 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
RBM39-207ENST00000412738 GLI2P10070 1586 aa22.91■■□□□ 1.26
RBM39-207ENST00000412738 KDM6BO15054 1643 aa22.9■■□□□ 1.26
RBM39-207ENST00000412738 ABCA8O94911 1581 aa22.89■■□□□ 1.25
RBM39-207ENST00000412738 EPRSP07814 1512 aaKnown RBP22.88■■□□□ 1.25
RBM39-207ENST00000412738 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
RBM39-207ENST00000412738 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
RBM39-207ENST00000412738 WDR7Q9Y4E6 1490 aa22.85■■□□□ 1.25
RBM39-207ENST00000412738 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
RBM39-207ENST00000412738 KIF21BO75037 1637 aa22.82■■□□□ 1.24
RBM39-207ENST00000412738 KCNH8Q96L42 1107 aa22.8■■□□□ 1.24
RBM39-207ENST00000412738 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
RBM39-207ENST00000412738 TEX14Q8IWB6 1497 aa22.79■■□□□ 1.24
RBM39-207ENST00000412738 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
RBM39-207ENST00000412738 PPRC1Q5VV67 1664 aaKnown RBP22.78■■□□□ 1.24
RBM39-207ENST00000412738 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
RBM39-207ENST00000412738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
RBM39-207ENST00000412738 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
RBM39-207ENST00000412738 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
RBM39-207ENST00000412738 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
RBM39-207ENST00000412738 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
RBM39-207ENST00000412738 ATP10BO94823 1461 aa22.72■■□□□ 1.23
RBM39-207ENST00000412738 CD109Q6YHK3 1445 aa22.71■■□□□ 1.23
RBM39-207ENST00000412738 CFAP43Q8NDM7 1665 aa22.69■■□□□ 1.22
RBM39-207ENST00000412738 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
RBM39-207ENST00000412738 MAGI3Q5TCQ9 1506 aa22.64■■□□□ 1.21
RBM39-207ENST00000412738 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
RBM39-207ENST00000412738 COL17A1Q9UMD9 1497 aaPredicted RBP22.61■■□□□ 1.21
RBM39-207ENST00000412738 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
RBM39-207ENST00000412738 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
RBM39-207ENST00000412738 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
RBM39-207ENST00000412738 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
RBM39-207ENST00000412738 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
RBM39-207ENST00000412738 ARHGAP35Q9NRY4 1499 aa22.49■■□□□ 1.19
RBM39-207ENST00000412738 PHLDB1Q86UU1 1377 aa22.49■■□□□ 1.19
RBM39-207ENST00000412738 ARAP3Q8WWN8 1544 aa22.45■■□□□ 1.18
RBM39-207ENST00000412738 HECW1Q76N89 1606 aa22.43■■□□□ 1.18
RBM39-207ENST00000412738 NEO1Q92859 1461 aa22.43■■□□□ 1.18
RBM39-207ENST00000412738 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
RBM39-207ENST00000412738 ADGRL1O94910 1474 aa22.41■■□□□ 1.18
RBM39-207ENST00000412738 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
RBM39-207ENST00000412738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.37■■□□□ 1.17
RBM39-207ENST00000412738 RAPGEF3O95398 923 aa22.36■■□□□ 1.17
RBM39-207ENST00000412738 CFAP74Q9C0B2 1584 aa22.33■■□□□ 1.17
RBM39-207ENST00000412738 FANCAO15360 1455 aa22.33■■□□□ 1.16
RBM39-207ENST00000412738 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.16
RBM39-207ENST00000412738 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
RBM39-207ENST00000412738 DENND4BO75064 1496 aaPredicted RBP22.29■■□□□ 1.16
RBM39-207ENST00000412738 CLIP1P30622 1438 aa22.28■■□□□ 1.16
RBM39-207ENST00000412738 PLCH2O75038 1416 aa22.26■■□□□ 1.15
RBM39-207ENST00000412738 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
RBM39-207ENST00000412738 TROQ12816 1431 aaPredicted RBP22.25■■□□□ 1.15
RBM39-207ENST00000412738 KIF14Q15058 1648 aa22.25■■□□□ 1.15
RBM39-207ENST00000412738 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
RBM39-207ENST00000412738 PCF11O94913 1555 aaKnown RBP22.24■■□□□ 1.15
RBM39-207ENST00000412738 FRMPD1Q5SYB0 1578 aa22.24■■□□□ 1.15
RBM39-207ENST00000412738 LRRIQ1Q96JM4 1722 aa22.23■■□□□ 1.15
RBM39-207ENST00000412738 EFCAB2Q5VUJ9 269 aa22.22■■□□□ 1.15
RBM39-207ENST00000412738 MYO5CQ9NQX4 1742 aa22.22■■□□□ 1.15
RBM39-207ENST00000412738 ARID4BQ4LE39 1312 aaPredicted RBP22.21■■□□□ 1.15
RBM39-207ENST00000412738 RICTORQ6R327 1708 aa22.2■■□□□ 1.14
RBM39-207ENST00000412738 FYCO1Q9BQS8 1478 aa22.19■■□□□ 1.14
RBM39-207ENST00000412738 SCAPERQ9BY12 1400 aa22.18■■□□□ 1.14
RBM39-207ENST00000412738 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
RBM39-207ENST00000412738 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms