RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
SMPD4-203ENST00000412570 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
SMPD4-203ENST00000412570 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
SMPD4-203ENST00000412570 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
SMPD4-203ENST00000412570 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
SMPD4-203ENST00000412570 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
SMPD4-203ENST00000412570 EIF4G3O43432 1585 aaKnown RBP14.86□□□□□ -0.03
SMPD4-203ENST00000412570 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
SMPD4-203ENST00000412570 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
SMPD4-203ENST00000412570 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.04
SMPD4-203ENST00000412570 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
SMPD4-203ENST00000412570 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
SMPD4-203ENST00000412570 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.04
SMPD4-203ENST00000412570 ZNF777Q9ULD5 760 aaPredicted RBP14.77□□□□□ -0.05
SMPD4-203ENST00000412570 PBRM1Q86U86 1689 aa14.76□□□□□ -0.05
SMPD4-203ENST00000412570 KCNH8Q96L42 1107 aa14.75□□□□□ -0.05
SMPD4-203ENST00000412570 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
SMPD4-203ENST00000412570 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
SMPD4-203ENST00000412570 CHIC2Q9UKJ5 165 aa14.71□□□□□ -0.05
SMPD4-203ENST00000412570 ADAMTS12P58397 1594 aa14.71□□□□□ -0.06
SMPD4-203ENST00000412570 CUL7Q14999 1698 aa14.7□□□□□ -0.06
SMPD4-203ENST00000412570 MTUS2Q5JR59 1369 aa14.7□□□□□ -0.06
SMPD4-203ENST00000412570 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
SMPD4-203ENST00000412570 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-203ENST00000412570 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-203ENST00000412570 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
SMPD4-203ENST00000412570 IQGAP2Q13576 1575 aa14.64□□□□□ -0.07
SMPD4-203ENST00000412570 CEP170Q5SW79 1584 aa14.63□□□□□ -0.07
SMPD4-203ENST00000412570 CYB5RLQ6IPT4 315 aa14.62□□□□□ -0.07
SMPD4-203ENST00000412570 PLB1Q6P1J6 1458 aa14.62□□□□□ -0.07
SMPD4-203ENST00000412570 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
SMPD4-203ENST00000412570 CDK13Q14004 1512 aaKnown RBP14.61□□□□□ -0.07
SMPD4-203ENST00000412570 KIAA0586Q9BVV6 1533 aa14.6□□□□□ -0.07
SMPD4-203ENST00000412570 CTTNBP2Q8WZ74 1663 aa14.59□□□□□ -0.07
SMPD4-203ENST00000412570 FMN1Q68DA7 1419 aa14.58□□□□□ -0.07
SMPD4-203ENST00000412570 PTPRGP23470 1445 aa14.58□□□□□ -0.08
SMPD4-203ENST00000412570 CARMIL2Q6F5E8 1435 aa14.57□□□□□ -0.08
SMPD4-203ENST00000412570 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-203ENST00000412570 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
SMPD4-203ENST00000412570 HRCP23327 699 aa14.57□□□□□ -0.08
SMPD4-203ENST00000412570 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
SMPD4-203ENST00000412570 RRP7BPQ9NSQ0 103 aa14.56□□□□□ -0.08
SMPD4-203ENST00000412570 CHD1O14646 1710 aa14.56□□□□□ -0.08
SMPD4-203ENST00000412570 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
SMPD4-203ENST00000412570 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
SMPD4-203ENST00000412570 DISP1Q96F81 1524 aa14.53□□□□□ -0.08
SMPD4-203ENST00000412570 CDK11AQ9UQ88 783 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-203ENST00000412570 CASKIN1Q8WXD9 1431 aa14.5□□□□□ -0.09
SMPD4-203ENST00000412570 LRRC9Q6ZRR7 1453 aa14.49□□□□□ -0.09
SMPD4-203ENST00000412570 NUP160Q12769 1436 aa14.49□□□□□ -0.09
SMPD4-203ENST00000412570 CCNB3Q8WWL7 1395 aa14.48□□□□□ -0.09
SMPD4-203ENST00000412570 NEUROD1Q13562 356 aa14.47□□□□□ -0.09
SMPD4-203ENST00000412570 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
SMPD4-203ENST00000412570 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
SMPD4-203ENST00000412570 EFCAB5A4FU69 1503 aa14.47□□□□□ -0.09
SMPD4-203ENST00000412570 TIAM1Q13009 1591 aa14.46□□□□□ -0.09
SMPD4-203ENST00000412570 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMPD4-203ENST00000412570 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
SMPD4-203ENST00000412570 EPRSP07814 1512 aaKnown RBP14.44□□□□□ -0.1
SMPD4-203ENST00000412570 FYCO1Q9BQS8 1478 aa14.43□□□□□ -0.1
SMPD4-203ENST00000412570 HNRNPMP52272 730 aaKnown RBP eCLIP14.43□□□□□ -0.11e-6■■■■□ 22.6
SMPD4-203ENST00000412570 NUP153P49790 1475 aaKnown RBP14.41□□□□□ -0.1
SMPD4-203ENST00000412570 SAMD9Q5K651 1589 aa14.41□□□□□ -0.1
SMPD4-203ENST00000412570 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
SMPD4-203ENST00000412570 MAGI3Q5TCQ9 1506 aa14.4□□□□□ -0.1
SMPD4-203ENST00000412570 NCOA2Q15596 1464 aa14.4□□□□□ -0.1
SMPD4-203ENST00000412570 FOXD1Q16676 465 aa14.39□□□□□ -0.11
SMPD4-203ENST00000412570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.116e-7■■■□□ 16.9
SMPD4-203ENST00000412570 SIN3AQ96ST3 1273 aa14.34□□□□□ -0.11
SMPD4-203ENST00000412570 ATP10BO94823 1461 aa14.34□□□□□ -0.11
SMPD4-203ENST00000412570 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
SMPD4-203ENST00000412570 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
SMPD4-203ENST00000412570 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
SMPD4-203ENST00000412570 HECW1Q76N89 1606 aa14.32□□□□□ -0.12
SMPD4-203ENST00000412570 RAPGEF6Q8TEU7 1601 aa14.32□□□□□ -0.12
SMPD4-203ENST00000412570 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-203ENST00000412570 FGD6Q6ZV73 1430 aa14.32□□□□□ -0.12
SMPD4-203ENST00000412570 RAB3GAP2Q9H2M9 1393 aa14.3□□□□□ -0.12
SMPD4-203ENST00000412570 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
SMPD4-203ENST00000412570 MYOM3Q5VTT5 1437 aa14.28□□□□□ -0.12
SMPD4-203ENST00000412570 PLPPR3Q6T4P5 718 aa14.28□□□□□ -0.12
SMPD4-203ENST00000412570 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-203ENST00000412570 AFAP1Q8N556 730 aa14.27□□□□□ -0.13
SMPD4-203ENST00000412570 PTPRKQ15262 1439 aa14.27□□□□□ -0.13
SMPD4-203ENST00000412570 TSPY4P0CV99 314 aa14.26□□□□□ -0.13
SMPD4-203ENST00000412570 TSPY10P0CW01 314 aa14.26□□□□□ -0.13
SMPD4-203ENST00000412570 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-203ENST00000412570 TROQ12816 1431 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-203ENST00000412570 KIF14Q15058 1648 aa14.25□□□□□ -0.13
SMPD4-203ENST00000412570 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
SMPD4-203ENST00000412570 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
SMPD4-203ENST00000412570 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
SMPD4-203ENST00000412570 CFAP43Q8NDM7 1665 aa14.22□□□□□ -0.13
SMPD4-203ENST00000412570 EHBP1L1Q8N3D4 1523 aa14.22□□□□□ -0.13
SMPD4-203ENST00000412570 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
SMPD4-203ENST00000412570 SUPT6HQ7KZ85 1726 aaKnown RBP14.2□□□□□ -0.14
SMPD4-203ENST00000412570 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
SMPD4-203ENST00000412570 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
SMPD4-203ENST00000412570 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
SMPD4-203ENST00000412570 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms