RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 KIAA0586Q9BVV6 1533 aa27.44■■□□□ 1.98
DDR1-230ENST00000412274 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
DDR1-230ENST00000412274 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
DDR1-230ENST00000412274 ERCC6L2Q5T890 1561 aa27.34■■□□□ 1.97
DDR1-230ENST00000412274 EEA1Q15075 1411 aa27.23■■□□□ 1.95
DDR1-230ENST00000412274 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
DDR1-230ENST00000412274 CARMIL2Q6F5E8 1435 aa27.2■■□□□ 1.94
DDR1-230ENST00000412274 PRXQ9BXM0 1461 aa27.19■■□□□ 1.94
DDR1-230ENST00000412274 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
DDR1-230ENST00000412274 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
DDR1-230ENST00000412274 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
DDR1-230ENST00000412274 TNIKQ9UKE5 1360 aa27.09■■□□□ 1.93
DDR1-230ENST00000412274 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
DDR1-230ENST00000412274 PTPRGP23470 1445 aa27.07■■□□□ 1.92
DDR1-230ENST00000412274 CTTNBP2Q8WZ74 1663 aa27.06■■□□□ 1.92
DDR1-230ENST00000412274 NPM1P06748 294 aaKnown RBP eCLIP27.05■■□□□ 1.92
DDR1-230ENST00000412274 DISP1Q96F81 1524 aa27■■□□□ 1.91
DDR1-230ENST00000412274 GOLGA3Q08378 1498 aa26.99■■□□□ 1.91
DDR1-230ENST00000412274 ADCY10Q96PN6 1610 aa26.94■■□□□ 1.9
DDR1-230ENST00000412274 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
DDR1-230ENST00000412274 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
DDR1-230ENST00000412274 UHRF1BP1LA0JNW5 1464 aa26.89■■□□□ 1.9
DDR1-230ENST00000412274 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
DDR1-230ENST00000412274 UACAQ9BZF9 1416 aa26.89■■□□□ 1.89
DDR1-230ENST00000412274 TTBK1Q5TCY1 1321 aaPredicted RBP26.86■■□□□ 1.89
DDR1-230ENST00000412274 KIF21BO75037 1637 aa26.85■■□□□ 1.89
DDR1-230ENST00000412274 ABCC2Q92887 1545 aa26.84■■□□□ 1.89
DDR1-230ENST00000412274 ABCC10Q5T3U5 1492 aa26.79■■□□□ 1.88
DDR1-230ENST00000412274 KDM5BQ9UGL1 1544 aa26.73■■□□□ 1.87
DDR1-230ENST00000412274 PLB1Q6P1J6 1458 aa26.73■■□□□ 1.87
DDR1-230ENST00000412274 KIF13AQ9H1H9 1805 aa26.72■■□□□ 1.87
DDR1-230ENST00000412274 FAM69CQ0P6D2 419 aa26.72■■□□□ 1.87
DDR1-230ENST00000412274 SAMD9Q5K651 1589 aa26.71■■□□□ 1.87
DDR1-230ENST00000412274 DIP2BQ9P265 1576 aa26.69■■□□□ 1.86
DDR1-230ENST00000412274 ABCA8O94911 1581 aa26.67■■□□□ 1.86
DDR1-230ENST00000412274 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
DDR1-230ENST00000412274 UBTFP17480 764 aaKnown RBP26.63■■□□□ 1.85
DDR1-230ENST00000412274 ZCCHC11Q5TAX3 1644 aaKnown RBP26.62■■□□□ 1.85
DDR1-230ENST00000412274 EFCAB5A4FU69 1503 aa26.62■■□□□ 1.85
DDR1-230ENST00000412274 P3H3Q8IVL6 736 aa26.61■■□□□ 1.85
DDR1-230ENST00000412274 GLI2P10070 1586 aa26.58■■□□□ 1.85
DDR1-230ENST00000412274 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
DDR1-230ENST00000412274 WDR7Q9Y4E6 1490 aa26.52■■□□□ 1.84
DDR1-230ENST00000412274 EPRSP07814 1512 aaKnown RBP26.51■■□□□ 1.83
DDR1-230ENST00000412274 RAPGEF6Q8TEU7 1601 aa26.5■■□□□ 1.83
DDR1-230ENST00000412274 FHOD3Q2V2M9 1422 aa26.48■■□□□ 1.83
DDR1-230ENST00000412274 ATP10BO94823 1461 aa26.45■■□□□ 1.82
DDR1-230ENST00000412274 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.82
DDR1-230ENST00000412274 TSPOAP1O95153 1857 aa26.4■■□□□ 1.82
DDR1-230ENST00000412274 FMN1Q68DA7 1419 aa26.4■■□□□ 1.82
DDR1-230ENST00000412274 MAP3K4Q9Y6R4 1608 aa26.39■■□□□ 1.82
DDR1-230ENST00000412274 TEX14Q8IWB6 1497 aa26.39■■□□□ 1.82
DDR1-230ENST00000412274 NUP153P49790 1475 aaKnown RBP26.36■■□□□ 1.81
DDR1-230ENST00000412274 ARHGAP35Q9NRY4 1499 aa26.36■■□□□ 1.81
DDR1-230ENST00000412274 KCNH8Q96L42 1107 aa26.35■■□□□ 1.81
DDR1-230ENST00000412274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.34■■□□□ 1.81
DDR1-230ENST00000412274 HNRNPUL2Q1KMD3 747 aaKnown RBP26.34■■□□□ 1.81
DDR1-230ENST00000412274 CFAP43Q8NDM7 1665 aa26.34■■□□□ 1.81
DDR1-230ENST00000412274 KDM6BO15054 1643 aa26.33■■□□□ 1.81
DDR1-230ENST00000412274 PPRC1Q5VV67 1664 aaKnown RBP26.31■■□□□ 1.8
DDR1-230ENST00000412274 CD109Q6YHK3 1445 aa26.31■■□□□ 1.8
DDR1-230ENST00000412274 ARID3CA6NKF2 412 aa26.3■■□□□ 1.8
DDR1-230ENST00000412274 MAGI3Q5TCQ9 1506 aa26.29■■□□□ 1.8
DDR1-230ENST00000412274 PLEKHD1A6NEE1 506 aa26.29■■□□□ 1.8
DDR1-230ENST00000412274 HECW1Q76N89 1606 aa26.24■■□□□ 1.79
DDR1-230ENST00000412274 ABCA9Q8IUA7 1624 aa26.21■■□□□ 1.79
DDR1-230ENST00000412274 CDK11AQ9UQ88 783 aaPredicted RBP26.21■■□□□ 1.79
DDR1-230ENST00000412274 PHLDB1Q86UU1 1377 aa26.2■■□□□ 1.78
DDR1-230ENST00000412274 CLIP1P30622 1438 aa26.18■■□□□ 1.78
DDR1-230ENST00000412274 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
DDR1-230ENST00000412274 CASKIN1Q8WXD9 1431 aa26.13■■□□□ 1.77
DDR1-230ENST00000412274 CDK13Q14004 1512 aaKnown RBP26.11■■□□□ 1.77
DDR1-230ENST00000412274 CCDC18Q5T9S5 1454 aa26.08■■□□□ 1.77
DDR1-230ENST00000412274 NEO1Q92859 1461 aa26.08■■□□□ 1.77
DDR1-230ENST00000412274 COL17A1Q9UMD9 1497 aaPredicted RBP26.08■■□□□ 1.77
DDR1-230ENST00000412274 ARAP3Q8WWN8 1544 aa26.07■■□□□ 1.76
DDR1-230ENST00000412274 FYCO1Q9BQS8 1478 aa26.06■■□□□ 1.76
DDR1-230ENST00000412274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.766e-7■■■■□ 21.9
DDR1-230ENST00000412274 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
DDR1-230ENST00000412274 TROQ12816 1431 aaPredicted RBP26.01■■□□□ 1.75
DDR1-230ENST00000412274 CFAP74Q9C0B2 1584 aa26■■□□□ 1.75
DDR1-230ENST00000412274 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
DDR1-230ENST00000412274 AEBP2Q6ZN18 517 aaPredicted RBP25.97■■□□□ 1.75
DDR1-230ENST00000412274 KIF14Q15058 1648 aa25.96■■□□□ 1.75
DDR1-230ENST00000412274 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.74
DDR1-230ENST00000412274 PLCH2O75038 1416 aa25.95■■□□□ 1.74
DDR1-230ENST00000412274 TTC37Q6PGP7 1564 aa25.95■■□□□ 1.74
DDR1-230ENST00000412274 FANCAO15360 1455 aa25.94■■□□□ 1.74
DDR1-230ENST00000412274 AKNAQ7Z591 1439 aa25.91■■□□□ 1.74
DDR1-230ENST00000412274 LOC105371045A0A1W2PR82 267 aa25.89■■□□□ 1.74
DDR1-230ENST00000412274 EFCAB2Q5VUJ9 269 aa25.88■■□□□ 1.73
DDR1-230ENST00000412274 MYO5CQ9NQX4 1742 aa25.88■■□□□ 1.73
DDR1-230ENST00000412274 DENND4BO75064 1496 aaPredicted RBP25.86■■□□□ 1.73
DDR1-230ENST00000412274 RAPGEF3O95398 923 aa25.83■■□□□ 1.73
DDR1-230ENST00000412274 ADGRL1O94910 1474 aa25.79■■□□□ 1.72
DDR1-230ENST00000412274 KDM4FA0A1W2PPD8 638 aa25.77■■□□□ 1.72
DDR1-230ENST00000412274 ARHGAP5Q13017 1502 aa25.77■■□□□ 1.72
DDR1-230ENST00000412274 FRMPD1Q5SYB0 1578 aa25.77■■□□□ 1.72
DDR1-230ENST00000412274 RICTORQ6R327 1708 aa25.77■■□□□ 1.72
DDR1-230ENST00000412274 MTUS2Q5JR59 1369 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms