RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 IGF1RP08069 1367 aa38.33■■■■□ 3.73
CROT-202ENST00000412227 CUL7Q14999 1698 aa38.31■■■■□ 3.72
CROT-202ENST00000412227 KIAA0586Q9BVV6 1533 aa38.21■■■■□ 3.71
CROT-202ENST00000412227 KIF13AQ9H1H9 1805 aa38.14■■■■□ 3.7
CROT-202ENST00000412227 CARMIL1Q5VZK9 1371 aa38.1■■■■□ 3.69
CROT-202ENST00000412227 NPM1P06748 294 aaKnown RBP eCLIP38.07■■■■□ 3.68
CROT-202ENST00000412227 ADCY10Q96PN6 1610 aa38.01■■■■□ 3.68
CROT-202ENST00000412227 MAPKBP1O60336 1514 aa37.94■■■■□ 3.66
CROT-202ENST00000412227 FAM69CQ0P6D2 419 aa37.91■■■■□ 3.66
CROT-202ENST00000412227 ABCC10Q5T3U5 1492 aa37.9■■■■□ 3.66
CROT-202ENST00000412227 AEBP2Q6ZN18 517 aaPredicted RBP37.87■■■■□ 3.65
CROT-202ENST00000412227 IQGAP2Q13576 1575 aa37.87■■■■□ 3.65
CROT-202ENST00000412227 PTPRGP23470 1445 aa37.87■■■■□ 3.65
CROT-202ENST00000412227 CARMIL2Q6F5E8 1435 aa37.86■■■■□ 3.65
CROT-202ENST00000412227 TTBK1Q5TCY1 1321 aaPredicted RBP37.84■■■■□ 3.65
CROT-202ENST00000412227 DIP2BQ9P265 1576 aa37.83■■■■□ 3.65
CROT-202ENST00000412227 TNIKQ9UKE5 1360 aa37.8■■■■□ 3.64
CROT-202ENST00000412227 RAPGEF2Q9Y4G8 1499 aa37.77■■■■□ 3.64
CROT-202ENST00000412227 TSPOAP1O95153 1857 aa37.69■■■■□ 3.62
CROT-202ENST00000412227 DISP1Q96F81 1524 aa37.66■■■■□ 3.62
CROT-202ENST00000412227 ABCC2Q92887 1545 aa37.64■■■■□ 3.62
CROT-202ENST00000412227 UGGT2Q9NYU1 1516 aa37.61■■■■□ 3.61
CROT-202ENST00000412227 UHRF1BP1LA0JNW5 1464 aa37.58■■■■□ 3.61
CROT-202ENST00000412227 UACAQ9BZF9 1416 aa37.57■■■■□ 3.6
CROT-202ENST00000412227 CTTNBP2Q8WZ74 1663 aa37.53■■■■□ 3.6
CROT-202ENST00000412227 KDM6BO15054 1643 aa37.52■■■■□ 3.6
CROT-202ENST00000412227 KIAA0556O60303 1618 aa37.52■■■■□ 3.6
CROT-202ENST00000412227 ASXL2Q76L83 1435 aa37.52■■■■□ 3.6
CROT-202ENST00000412227 PLB1Q6P1J6 1458 aa37.51■■■■□ 3.59
CROT-202ENST00000412227 GLI2P10070 1586 aa37.41■■■■□ 3.58
CROT-202ENST00000412227 KDM5BQ9UGL1 1544 aa37.41■■■■□ 3.58
CROT-202ENST00000412227 ZCCHC11Q5TAX3 1644 aaKnown RBP37.37■■■■□ 3.57
CROT-202ENST00000412227 PRXQ9BXM0 1461 aa37.35■■■■□ 3.57
CROT-202ENST00000412227 PPRC1Q5VV67 1664 aaKnown RBP37.34■■■■□ 3.57
CROT-202ENST00000412227 GOLGA3Q08378 1498 aa37.33■■■■□ 3.57
CROT-202ENST00000412227 EPRSP07814 1512 aaKnown RBP37.29■■■■□ 3.56
CROT-202ENST00000412227 MAP3K4Q9Y6R4 1608 aa37.22■■■■□ 3.55
CROT-202ENST00000412227 ABCA8O94911 1581 aa37.17■■■■□ 3.54
CROT-202ENST00000412227 WDR7Q9Y4E6 1490 aa37.15■■■■□ 3.54
CROT-202ENST00000412227 CSRNP3Q8WYN3 585 aa37.12■■■■□ 3.53
CROT-202ENST00000412227 TEX14Q8IWB6 1497 aa37.12■■■■□ 3.53
CROT-202ENST00000412227 KDM4FA0A1W2PPD8 638 aa37.09■■■■□ 3.53
CROT-202ENST00000412227 FAM9AQ8IZU1 332 aaPredicted RBP37.06■■■■□ 3.52
CROT-202ENST00000412227 P3H3Q8IVL6 736 aa37.04■■■■□ 3.52
CROT-202ENST00000412227 COL17A1Q9UMD9 1497 aaPredicted RBP37.04■■■■□ 3.52
CROT-202ENST00000412227 KCNH8Q96L42 1107 aa37.02■■■■□ 3.52
CROT-202ENST00000412227 CFAP43Q8NDM7 1665 aa36.99■■■■□ 3.51
CROT-202ENST00000412227 EEA1Q15075 1411 aa36.94■■■■□ 3.5
CROT-202ENST00000412227 CD109Q6YHK3 1445 aa36.94■■■■□ 3.5
CROT-202ENST00000412227 SAMD9Q5K651 1589 aa36.92■■■■□ 3.5
CROT-202ENST00000412227 ARID3CA6NKF2 412 aa36.9■■■■□ 3.5
CROT-202ENST00000412227 MAGI3Q5TCQ9 1506 aa36.9■■■■□ 3.5
CROT-202ENST00000412227 ATP10BO94823 1461 aa36.86■■■■□ 3.49
CROT-202ENST00000412227 ADGRL1O94910 1474 aa36.82■■■■□ 3.48
CROT-202ENST00000412227 RAPGEF6Q8TEU7 1601 aa36.81■■■■□ 3.48
CROT-202ENST00000412227 RANGAP1P46060 587 aaPredicted RBP36.8■■■■□ 3.48
CROT-202ENST00000412227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.71■■■■□ 3.47
CROT-202ENST00000412227 HNRNPUL2Q1KMD3 747 aaKnown RBP36.71■■■■□ 3.47
CROT-202ENST00000412227 ABCA9Q8IUA7 1624 aa36.68■■■■□ 3.46
CROT-202ENST00000412227 FHOD3Q2V2M9 1422 aa36.68■■■■□ 3.46
CROT-202ENST00000412227 KIF21BO75037 1637 aa36.67■■■■□ 3.46
CROT-202ENST00000412227 NUP153P49790 1475 aaKnown RBP36.62■■■■□ 3.45
CROT-202ENST00000412227 ARAP3Q8WWN8 1544 aa36.61■■■■□ 3.45
CROT-202ENST00000412227 EFCAB5A4FU69 1503 aa36.56■■■■□ 3.44
CROT-202ENST00000412227 PHLDB1Q86UU1 1377 aa36.54■■■■□ 3.44
CROT-202ENST00000412227 PLEKHD1A6NEE1 506 aa36.48■■■■□ 3.43
CROT-202ENST00000412227 EHMT2Q96KQ7 1210 aa36.47■■■■□ 3.43
CROT-202ENST00000412227 NEO1Q92859 1461 aa36.47■■■■□ 3.43
CROT-202ENST00000412227 CHIC1Q5VXU3 224 aa36.45■■■■□ 3.43
CROT-202ENST00000412227 UBTFP17480 764 aaKnown RBP36.44■■■■□ 3.42
CROT-202ENST00000412227 RAPGEF3O95398 923 aa36.41■■■■□ 3.42
CROT-202ENST00000412227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.31■■■■□ 3.4
CROT-202ENST00000412227 HECW2Q9P2P5 1572 aa36.31■■■■□ 3.4
CROT-202ENST00000412227 CDK13Q14004 1512 aaKnown RBP36.3■■■■□ 3.4
CROT-202ENST00000412227 FRMPD1Q5SYB0 1578 aa36.3■■■■□ 3.4
CROT-202ENST00000412227 CFAP74Q9C0B2 1584 aa36.27■■■■□ 3.4
CROT-202ENST00000412227 TTC37Q6PGP7 1564 aa36.26■■■■□ 3.39
CROT-202ENST00000412227 ATP1B4Q9UN42 357 aaPredicted RBP36.25■■■■□ 3.39
CROT-202ENST00000412227 FMN1Q68DA7 1419 aa36.25■■■■□ 3.39
CROT-202ENST00000412227 FANCAO15360 1455 aa36.24■■■■□ 3.39
CROT-202ENST00000412227 AKNAQ7Z591 1439 aa36.24■■■■□ 3.39
CROT-202ENST00000412227 ARHGAP35Q9NRY4 1499 aa36.23■■■■□ 3.39
CROT-202ENST00000412227 DENND4BO75064 1496 aaPredicted RBP36.22■■■■□ 3.39
CROT-202ENST00000412227 RICTORQ6R327 1708 aa36.22■■■■□ 3.39
CROT-202ENST00000412227 HECW1Q76N89 1606 aa36.21■■■■□ 3.39
CROT-202ENST00000412227 ADAMTSL3P82987 1691 aa36.19■■■■□ 3.38
CROT-202ENST00000412227 ARID4BQ4LE39 1312 aaPredicted RBP36.16■■■■□ 3.38
CROT-202ENST00000412227 BCORL1Q5H9F3 1711 aa36.14■■■■□ 3.38
CROT-202ENST00000412227 ARHGEF40Q8TER5 1519 aa36.12■■■■□ 3.37
CROT-202ENST00000412227 CDK11AQ9UQ88 783 aaPredicted RBP36.1■■■■□ 3.37
CROT-202ENST00000412227 PTPRMP28827 1452 aa36.09■■■■□ 3.37
CROT-202ENST00000412227 PLCH2O75038 1416 aa36.08■■■■□ 3.37
CROT-202ENST00000412227 MYO5CQ9NQX4 1742 aa36.05■■■■□ 3.36
CROT-202ENST00000412227 MADDQ8WXG6 1647 aa36.04■■■■□ 3.36
CROT-202ENST00000412227 ZMYM4Q5VZL5 1548 aa36.03■■■■□ 3.36
CROT-202ENST00000412227 LRRIQ1Q96JM4 1722 aa36.01■■■■□ 3.36
CROT-202ENST00000412227 SCAPERQ9BY12 1400 aa36■■■■□ 3.35
CROT-202ENST00000412227 ZFYVE16Q7Z3T8 1539 aa35.99■■■■□ 3.35
CROT-202ENST00000412227 KIF14Q15058 1648 aa35.98■■■■□ 3.35
CROT-202ENST00000412227 EFCAB2Q5VUJ9 269 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms