RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 FKBP8Q14318 412 aa16.37■□□□□ 0.21
ABCA13-201ENST00000411975 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
ABCA13-201ENST00000411975 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
ABCA13-201ENST00000411975 KANK4Q5T7N3 995 aaPredicted RBP16.36■□□□□ 0.21
ABCA13-201ENST00000411975 FAM9BQ8IZU0 186 aa16.36■□□□□ 0.21
ABCA13-201ENST00000411975 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
ABCA13-201ENST00000411975 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
ABCA13-201ENST00000411975 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
ABCA13-201ENST00000411975 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
ABCA13-201ENST00000411975 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
ABCA13-201ENST00000411975 CHGAP10645 457 aaKnown RBP16.31■□□□□ 0.2
ABCA13-201ENST00000411975 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
ABCA13-201ENST00000411975 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
ABCA13-201ENST00000411975 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
ABCA13-201ENST00000411975 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
ABCA13-201ENST00000411975 MRS2Q9HD23 443 aa16.29■□□□□ 0.2
ABCA13-201ENST00000411975 TDRD9Q8NDG6 1382 aaKnown RBP16.27■□□□□ 0.2
ABCA13-201ENST00000411975 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.2
ABCA13-201ENST00000411975 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
ABCA13-201ENST00000411975 KCNH8Q96L42 1107 aa16.27■□□□□ 0.2
ABCA13-201ENST00000411975 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
ABCA13-201ENST00000411975 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
ABCA13-201ENST00000411975 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
ABCA13-201ENST00000411975 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.18
ABCA13-201ENST00000411975 NEFMP07197 916 aa16.2■□□□□ 0.18
ABCA13-201ENST00000411975 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
ABCA13-201ENST00000411975 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
ABCA13-201ENST00000411975 STAG3Q9UJ98 1225 aa16.17■□□□□ 0.18
ABCA13-201ENST00000411975 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
ABCA13-201ENST00000411975 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
ABCA13-201ENST00000411975 RAB3GAP2Q9H2M9 1393 aa16.15■□□□□ 0.18
ABCA13-201ENST00000411975 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
ABCA13-201ENST00000411975 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
ABCA13-201ENST00000411975 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
ABCA13-201ENST00000411975 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
ABCA13-201ENST00000411975 CARD11Q9BXL7 1154 aa16.09■□□□□ 0.17
ABCA13-201ENST00000411975 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
ABCA13-201ENST00000411975 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
ABCA13-201ENST00000411975 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
ABCA13-201ENST00000411975 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
ABCA13-201ENST00000411975 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
ABCA13-201ENST00000411975 IGF1RP08069 1367 aa16.04■□□□□ 0.16
ABCA13-201ENST00000411975 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
ABCA13-201ENST00000411975 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
ABCA13-201ENST00000411975 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
ABCA13-201ENST00000411975 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
ABCA13-201ENST00000411975 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
ABCA13-201ENST00000411975 CDCA8Q53HL2 280 aa15.98■□□□□ 0.15
ABCA13-201ENST00000411975 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
ABCA13-201ENST00000411975 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
ABCA13-201ENST00000411975 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
ABCA13-201ENST00000411975 FOXD1Q16676 465 aa15.97■□□□□ 0.15
ABCA13-201ENST00000411975 PKD2Q13563 968 aa15.96■□□□□ 0.14
ABCA13-201ENST00000411975 DCAF11Q8TEB1 546 aa15.96■□□□□ 0.14
ABCA13-201ENST00000411975 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
ABCA13-201ENST00000411975 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
ABCA13-201ENST00000411975 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
ABCA13-201ENST00000411975 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
ABCA13-201ENST00000411975 KNSTRNQ9Y448 316 aa15.94■□□□□ 0.14
ABCA13-201ENST00000411975 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
ABCA13-201ENST00000411975 KIF21BO75037 1637 aa15.93■□□□□ 0.14
ABCA13-201ENST00000411975 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
ABCA13-201ENST00000411975 CFTRP13569 1480 aa15.91■□□□□ 0.14
ABCA13-201ENST00000411975 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
ABCA13-201ENST00000411975 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
ABCA13-201ENST00000411975 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
ABCA13-201ENST00000411975 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
ABCA13-201ENST00000411975 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
ABCA13-201ENST00000411975 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
ABCA13-201ENST00000411975 NUP155O75694 1391 aa15.88■□□□□ 0.13
ABCA13-201ENST00000411975 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
ABCA13-201ENST00000411975 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
ABCA13-201ENST00000411975 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
ABCA13-201ENST00000411975 HMGXB3Q12766 1538 aa15.83■□□□□ 0.13
ABCA13-201ENST00000411975 KANK1Q14678 1352 aa15.83■□□□□ 0.13
ABCA13-201ENST00000411975 TMF1P82094 1093 aa15.83■□□□□ 0.13
ABCA13-201ENST00000411975 UPF2Q9HAU5 1272 aaKnown RBP15.83■□□□□ 0.12
ABCA13-201ENST00000411975 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
ABCA13-201ENST00000411975 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
ABCA13-201ENST00000411975 ARAP1Q96P48 1450 aa15.81■□□□□ 0.12
ABCA13-201ENST00000411975 CFAP53Q96M91 514 aa15.8■□□□□ 0.12
ABCA13-201ENST00000411975 CC2D1BQ5T0F9 858 aaKnown RBP15.8■□□□□ 0.12
ABCA13-201ENST00000411975 HNRNPMP52272 730 aaKnown RBP eCLIP15.79■□□□□ 0.12
ABCA13-201ENST00000411975 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
ABCA13-201ENST00000411975 RSPH4AQ5TD94 716 aa15.78■□□□□ 0.12
ABCA13-201ENST00000411975 PPP4R2Q9NY27 417 aa15.78■□□□□ 0.12
ABCA13-201ENST00000411975 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
ABCA13-201ENST00000411975 LRRC9Q6ZRR7 1453 aa15.77■□□□□ 0.12
ABCA13-201ENST00000411975 CUX1P39880 1505 aa15.76■□□□□ 0.11
ABCA13-201ENST00000411975 FGD6Q6ZV73 1430 aa15.76■□□□□ 0.11
ABCA13-201ENST00000411975 ROCK2O75116 1388 aaKnown RBP15.73■□□□□ 0.11
ABCA13-201ENST00000411975 CASKIN1Q8WXD9 1431 aa15.73■□□□□ 0.11
ABCA13-201ENST00000411975 MYOM3Q5VTT5 1437 aa15.72■□□□□ 0.11
ABCA13-201ENST00000411975 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.11
ABCA13-201ENST00000411975 POGKQ9P215 609 aa15.72■□□□□ 0.11
ABCA13-201ENST00000411975 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
ABCA13-201ENST00000411975 GGT6Q6P531 493 aa15.71■□□□□ 0.11
ABCA13-201ENST00000411975 NESP48681 1621 aa15.71■□□□□ 0.11
ABCA13-201ENST00000411975 PTPRGP23470 1445 aa15.71■□□□□ 0.11
ABCA13-201ENST00000411975 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms