RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
PKP4-203ENST00000411900 JPH4Q96JJ6 628 aa17.34■□□□□ 0.37
PKP4-203ENST00000411900 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
PKP4-203ENST00000411900 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
PKP4-203ENST00000411900 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
PKP4-203ENST00000411900 IQGAP2Q13576 1575 aa17.16■□□□□ 0.34
PKP4-203ENST00000411900 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
PKP4-203ENST00000411900 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
PKP4-203ENST00000411900 KIF13AQ9H1H9 1805 aa17.14■□□□□ 0.33
PKP4-203ENST00000411900 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
PKP4-203ENST00000411900 PTPRGP23470 1445 aa17.09■□□□□ 0.33
PKP4-203ENST00000411900 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
PKP4-203ENST00000411900 CTTNBP2Q8WZ74 1663 aa17.07■□□□□ 0.32
PKP4-203ENST00000411900 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
PKP4-203ENST00000411900 DISP1Q96F81 1524 aa17.06■□□□□ 0.32
PKP4-203ENST00000411900 MAPKBP1O60336 1514 aa17.05■□□□□ 0.32
PKP4-203ENST00000411900 UGGT2Q9NYU1 1516 aa17.03■□□□□ 0.32
PKP4-203ENST00000411900 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
PKP4-203ENST00000411900 DIP2BQ9P265 1576 aa17.02■□□□□ 0.31
PKP4-203ENST00000411900 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
PKP4-203ENST00000411900 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
PKP4-203ENST00000411900 PRXQ9BXM0 1461 aa17■□□□□ 0.31
PKP4-203ENST00000411900 TSPOAP1O95153 1857 aa16.99■□□□□ 0.31
PKP4-203ENST00000411900 ABCC2Q92887 1545 aa16.97■□□□□ 0.31
PKP4-203ENST00000411900 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
PKP4-203ENST00000411900 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
PKP4-203ENST00000411900 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
PKP4-203ENST00000411900 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
PKP4-203ENST00000411900 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
PKP4-203ENST00000411900 ZCCHC11Q5TAX3 1644 aaKnown RBP16.91■□□□□ 0.3
PKP4-203ENST00000411900 GOLGA3Q08378 1498 aa16.9■□□□□ 0.3
PKP4-203ENST00000411900 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
PKP4-203ENST00000411900 KDM5BQ9UGL1 1544 aa16.87■□□□□ 0.29
PKP4-203ENST00000411900 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
PKP4-203ENST00000411900 EEA1Q15075 1411 aa16.85■□□□□ 0.29
PKP4-203ENST00000411900 RANGAP1P46060 587 aaPredicted RBP16.84■□□□□ 0.29
PKP4-203ENST00000411900 KDM6BO15054 1643 aa16.84■□□□□ 0.29
PKP4-203ENST00000411900 ABCA8O94911 1581 aa16.83■□□□□ 0.28
PKP4-203ENST00000411900 PPRC1Q5VV67 1664 aaKnown RBP16.82■□□□□ 0.28
PKP4-203ENST00000411900 GLI2P10070 1586 aa16.82■□□□□ 0.28
PKP4-203ENST00000411900 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
PKP4-203ENST00000411900 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
PKP4-203ENST00000411900 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
PKP4-203ENST00000411900 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
PKP4-203ENST00000411900 AEBP2Q6ZN18 517 aaPredicted RBP16.79■□□□□ 0.28
PKP4-203ENST00000411900 SAMD9Q5K651 1589 aa16.78■□□□□ 0.28
PKP4-203ENST00000411900 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
PKP4-203ENST00000411900 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
PKP4-203ENST00000411900 KIF21BO75037 1637 aa16.76■□□□□ 0.27
PKP4-203ENST00000411900 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
PKP4-203ENST00000411900 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.27
PKP4-203ENST00000411900 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
PKP4-203ENST00000411900 ATP10BO94823 1461 aa16.69■□□□□ 0.26
PKP4-203ENST00000411900 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
PKP4-203ENST00000411900 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
PKP4-203ENST00000411900 UBTFP17480 764 aaKnown RBP16.66■□□□□ 0.26
PKP4-203ENST00000411900 COL17A1Q9UMD9 1497 aaPredicted RBP16.66■□□□□ 0.26
PKP4-203ENST00000411900 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
PKP4-203ENST00000411900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
PKP4-203ENST00000411900 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
PKP4-203ENST00000411900 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
PKP4-203ENST00000411900 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
PKP4-203ENST00000411900 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
PKP4-203ENST00000411900 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
PKP4-203ENST00000411900 KDM4FA0A1W2PPD8 638 aa16.57■□□□□ 0.24
PKP4-203ENST00000411900 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
PKP4-203ENST00000411900 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
PKP4-203ENST00000411900 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
PKP4-203ENST00000411900 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
PKP4-203ENST00000411900 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
PKP4-203ENST00000411900 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
PKP4-203ENST00000411900 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
PKP4-203ENST00000411900 ARAP3Q8WWN8 1544 aa16.46■□□□□ 0.23
PKP4-203ENST00000411900 TTC37Q6PGP7 1564 aa16.46■□□□□ 0.23
PKP4-203ENST00000411900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.225e-10■■■■□ 24.2
PKP4-203ENST00000411900 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
PKP4-203ENST00000411900 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
PKP4-203ENST00000411900 NEO1Q92859 1461 aa16.43■□□□□ 0.22
PKP4-203ENST00000411900 FRMPD1Q5SYB0 1578 aa16.41■□□□□ 0.22
PKP4-203ENST00000411900 PHLDB1Q86UU1 1377 aa16.4■□□□□ 0.22
PKP4-203ENST00000411900 FANCAO15360 1455 aa16.39■□□□□ 0.21
PKP4-203ENST00000411900 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
PKP4-203ENST00000411900 CFAP74Q9C0B2 1584 aa16.38■□□□□ 0.21
PKP4-203ENST00000411900 KIF14Q15058 1648 aa16.38■□□□□ 0.21
PKP4-203ENST00000411900 AKNAQ7Z591 1439 aa16.37■□□□□ 0.21
PKP4-203ENST00000411900 RICTORQ6R327 1708 aa16.36■□□□□ 0.21
PKP4-203ENST00000411900 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
PKP4-203ENST00000411900 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
PKP4-203ENST00000411900 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
PKP4-203ENST00000411900 CLIP1P30622 1438 aa16.33■□□□□ 0.2
PKP4-203ENST00000411900 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
PKP4-203ENST00000411900 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
PKP4-203ENST00000411900 PLCH2O75038 1416 aa16.31■□□□□ 0.2
PKP4-203ENST00000411900 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
PKP4-203ENST00000411900 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
PKP4-203ENST00000411900 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
PKP4-203ENST00000411900 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
PKP4-203ENST00000411900 ARHGAP5Q13017 1502 aa16.27■□□□□ 0.2
PKP4-203ENST00000411900 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.19
PKP4-203ENST00000411900 BCORL1Q5H9F3 1711 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms