RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 CHIC1Q5VXU3 224 aa34.23■■■■□ 3.07
LSM12P1-201ENST00000411836 KIAA0586Q9BVV6 1533 aa34.22■■■■□ 3.07
LSM12P1-201ENST00000411836 SHROOM2Q13796 1616 aa34.22■■■■□ 3.07
LSM12P1-201ENST00000411836 PRG4Q92954 1404 aaPredicted RBP34.2■■■■□ 3.06
LSM12P1-201ENST00000411836 ERCC6L2Q5T890 1561 aa34.17■■■■□ 3.06
LSM12P1-201ENST00000411836 CSRNP3Q8WYN3 585 aa34.12■■■■□ 3.05
LSM12P1-201ENST00000411836 EEA1Q15075 1411 aa34.09■■■■□ 3.05
LSM12P1-201ENST00000411836 FAM9AQ8IZU1 332 aaPredicted RBP34.08■■■■□ 3.05
LSM12P1-201ENST00000411836 PRXQ9BXM0 1461 aa34.04■■■■□ 3.04
LSM12P1-201ENST00000411836 IQGAP2Q13576 1575 aa34.01■■■■□ 3.03
LSM12P1-201ENST00000411836 CARMIL2Q6F5E8 1435 aa33.95■■■■□ 3.02
LSM12P1-201ENST00000411836 TTBK1Q5TCY1 1321 aaPredicted RBP33.88■■■■□ 3.01
LSM12P1-201ENST00000411836 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
LSM12P1-201ENST00000411836 CTTNBP2Q8WZ74 1663 aa33.83■■■■□ 3.01
LSM12P1-201ENST00000411836 PTPRGP23470 1445 aa33.81■■■■□ 3
LSM12P1-201ENST00000411836 TNIKQ9UKE5 1360 aa33.81■■■■□ 3
LSM12P1-201ENST00000411836 UGGT2Q9NYU1 1516 aa33.8■■■■□ 3
LSM12P1-201ENST00000411836 NPM1P06748 294 aaKnown RBP eCLIP33.75■■■□□ 2.99
LSM12P1-201ENST00000411836 DISP1Q96F81 1524 aa33.74■■■□□ 2.99
LSM12P1-201ENST00000411836 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
LSM12P1-201ENST00000411836 EHMT2Q96KQ7 1210 aa33.68■■■□□ 2.98
LSM12P1-201ENST00000411836 KIAA0556O60303 1618 aa33.67■■■□□ 2.98
LSM12P1-201ENST00000411836 KIF21BO75037 1637 aa33.67■■■□□ 2.98
LSM12P1-201ENST00000411836 UBTFP17480 764 aaKnown RBP33.6■■■□□ 2.97
LSM12P1-201ENST00000411836 RANGAP1P46060 587 aaPredicted RBP33.6■■■□□ 2.97
LSM12P1-201ENST00000411836 ADCY10Q96PN6 1610 aa33.59■■■□□ 2.97
LSM12P1-201ENST00000411836 P3H3Q8IVL6 736 aa33.56■■■□□ 2.96
LSM12P1-201ENST00000411836 UACAQ9BZF9 1416 aa33.54■■■□□ 2.96
LSM12P1-201ENST00000411836 UHRF1BP1LA0JNW5 1464 aa33.46■■■□□ 2.95
LSM12P1-201ENST00000411836 ABCC2Q92887 1545 aa33.45■■■□□ 2.95
LSM12P1-201ENST00000411836 MAPKBP1O60336 1514 aa33.4■■■□□ 2.94
LSM12P1-201ENST00000411836 SAMD9Q5K651 1589 aa33.38■■■□□ 2.93
LSM12P1-201ENST00000411836 PLB1Q6P1J6 1458 aa33.38■■■□□ 2.93
LSM12P1-201ENST00000411836 FAM69CQ0P6D2 419 aa33.34■■■□□ 2.93
LSM12P1-201ENST00000411836 ABCC10Q5T3U5 1492 aa33.3■■■□□ 2.92
LSM12P1-201ENST00000411836 FHOD3Q2V2M9 1422 aa33.29■■■□□ 2.92
LSM12P1-201ENST00000411836 EFCAB5A4FU69 1503 aa33.29■■■□□ 2.92
LSM12P1-201ENST00000411836 KDM5BQ9UGL1 1544 aa33.29■■■□□ 2.92
LSM12P1-201ENST00000411836 ABCA8O94911 1581 aa33.29■■■□□ 2.92
LSM12P1-201ENST00000411836 ASXL2Q76L83 1435 aa33.27■■■□□ 2.92
LSM12P1-201ENST00000411836 ZCCHC11Q5TAX3 1644 aaKnown RBP33.23■■■□□ 2.91
LSM12P1-201ENST00000411836 ARID3CA6NKF2 412 aa33.22■■■□□ 2.91
LSM12P1-201ENST00000411836 KIF13AQ9H1H9 1805 aa33.21■■■□□ 2.91
LSM12P1-201ENST00000411836 DIP2BQ9P265 1576 aa33.2■■■□□ 2.91
LSM12P1-201ENST00000411836 RAPGEF6Q8TEU7 1601 aa33.13■■■□□ 2.89
LSM12P1-201ENST00000411836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.13■■■□□ 2.89
LSM12P1-201ENST00000411836 HNRNPUL2Q1KMD3 747 aaKnown RBP33.13■■■□□ 2.89
LSM12P1-201ENST00000411836 ARHGAP35Q9NRY4 1499 aa33.11■■■□□ 2.89
LSM12P1-201ENST00000411836 WDR7Q9Y4E6 1490 aa33.08■■■□□ 2.89
LSM12P1-201ENST00000411836 ATP10BO94823 1461 aa33.06■■■□□ 2.88
LSM12P1-201ENST00000411836 KCNH8Q96L42 1107 aa33.06■■■□□ 2.88
LSM12P1-201ENST00000411836 EPRSP07814 1512 aaKnown RBP33.04■■■□□ 2.88
LSM12P1-201ENST00000411836 ATP1B4Q9UN42 357 aaPredicted RBP33.04■■■□□ 2.88
LSM12P1-201ENST00000411836 FMN1Q68DA7 1419 aa33.03■■■□□ 2.88
LSM12P1-201ENST00000411836 GLI2P10070 1586 aa33.01■■■□□ 2.88
LSM12P1-201ENST00000411836 NUP153P49790 1475 aaKnown RBP33■■■□□ 2.87
LSM12P1-201ENST00000411836 TSPOAP1O95153 1857 aa32.97■■■□□ 2.87
LSM12P1-201ENST00000411836 CLIP1P30622 1438 aa32.95■■■□□ 2.87
LSM12P1-201ENST00000411836 PLEKHD1A6NEE1 506 aa32.91■■■□□ 2.86
LSM12P1-201ENST00000411836 LOC105371045A0A1W2PR82 267 aa32.88■■■□□ 2.85
LSM12P1-201ENST00000411836 HECW1Q76N89 1606 aa32.84■■■□□ 2.85
LSM12P1-201ENST00000411836 MAP3K4Q9Y6R4 1608 aa32.84■■■□□ 2.85
LSM12P1-201ENST00000411836 CD109Q6YHK3 1445 aa32.83■■■□□ 2.85
LSM12P1-201ENST00000411836 TEX14Q8IWB6 1497 aa32.8■■■□□ 2.84
LSM12P1-201ENST00000411836 CDK13Q14004 1512 aaKnown RBP32.79■■■□□ 2.84
LSM12P1-201ENST00000411836 CDK11AQ9UQ88 783 aaPredicted RBP32.78■■■□□ 2.84
LSM12P1-201ENST00000411836 CEP162Q5TB80 1403 aa32.77■■■□□ 2.84
LSM12P1-201ENST00000411836 CFAP43Q8NDM7 1665 aa32.76■■■□□ 2.84
LSM12P1-201ENST00000411836 KDM6BO15054 1643 aa32.75■■■□□ 2.83
LSM12P1-201ENST00000411836 PPRC1Q5VV67 1664 aaKnown RBP32.75■■■□□ 2.83
LSM12P1-201ENST00000411836 CASKIN1Q8WXD9 1431 aa32.74■■■□□ 2.83
LSM12P1-201ENST00000411836 MAGI3Q5TCQ9 1506 aa32.7■■■□□ 2.83
LSM12P1-201ENST00000411836 PCF11O94913 1555 aaKnown RBP32.69■■■□□ 2.82
LSM12P1-201ENST00000411836 ABCA9Q8IUA7 1624 aa32.66■■■□□ 2.82
LSM12P1-201ENST00000411836 FYCO1Q9BQS8 1478 aa32.64■■■□□ 2.82
LSM12P1-201ENST00000411836 CCDC18Q5T9S5 1454 aa32.63■■■□□ 2.81
LSM12P1-201ENST00000411836 TROQ12816 1431 aaPredicted RBP32.55■■■□□ 2.8
LSM12P1-201ENST00000411836 LRRIQ1Q96JM4 1722 aa32.54■■■□□ 2.8
LSM12P1-201ENST00000411836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.54■■■□□ 2.8
LSM12P1-201ENST00000411836 COL17A1Q9UMD9 1497 aaPredicted RBP32.52■■■□□ 2.8
LSM12P1-201ENST00000411836 PHLDB1Q86UU1 1377 aa32.5■■■□□ 2.79
LSM12P1-201ENST00000411836 TTC37Q6PGP7 1564 aa32.48■■■□□ 2.79
LSM12P1-201ENST00000411836 KIF14Q15058 1648 aa32.48■■■□□ 2.79
LSM12P1-201ENST00000411836 NEO1Q92859 1461 aa32.47■■■□□ 2.79
LSM12P1-201ENST00000411836 FANCAO15360 1455 aa32.42■■■□□ 2.78
LSM12P1-201ENST00000411836 ARAP3Q8WWN8 1544 aa32.41■■■□□ 2.78
LSM12P1-201ENST00000411836 PLCH2O75038 1416 aa32.4■■■□□ 2.78
LSM12P1-201ENST00000411836 VPS8Q8N3P4 1428 aa32.37■■■□□ 2.77
LSM12P1-201ENST00000411836 CFAP74Q9C0B2 1584 aa32.36■■■□□ 2.77
LSM12P1-201ENST00000411836 AKNAQ7Z591 1439 aa32.36■■■□□ 2.77
LSM12P1-201ENST00000411836 MTUS2Q5JR59 1369 aa32.36■■■□□ 2.77
LSM12P1-201ENST00000411836 EFCAB2Q5VUJ9 269 aa32.36■■■□□ 2.77
LSM12P1-201ENST00000411836 RAPGEF3O95398 923 aa32.34■■■□□ 2.77
LSM12P1-201ENST00000411836 MYO5CQ9NQX4 1742 aa32.33■■■□□ 2.77
LSM12P1-201ENST00000411836 ARHGAP5Q13017 1502 aa32.29■■■□□ 2.76
LSM12P1-201ENST00000411836 DENND4BO75064 1496 aaPredicted RBP32.28■■■□□ 2.76
LSM12P1-201ENST00000411836 ADGRL1O94910 1474 aa32.24■■■□□ 2.75
LSM12P1-201ENST00000411836 AEBP2Q6ZN18 517 aaPredicted RBP32.22■■■□□ 2.75
LSM12P1-201ENST00000411836 SCAPERQ9BY12 1400 aa32.22■■■□□ 2.75
LSM12P1-201ENST00000411836 EHBP1L1Q8N3D4 1523 aa32.2■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms